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The map label for this gene is 39997365

Identifier: 39997365

GI number: 39997365

Start: 2482449

End: 2482967

Strand: Reverse

Name: 39997365

Synonym: GSU2267

Alternate gene names: NA

Gene position: 2482967-2482449 (Counterclockwise)

Preceding gene: 39997366

Following gene: 39997364

Centisome position: 65.1

GC content: 55.49

Gene sequence:

>519_bases
ATGAAAAGGATCATTGCAGCCACCGTCGTTACGTTGTCACTCATTGCCGCTTCCGCCTTCGGAGCGGAAGGGGGCAAACT
CGGCTTCATCGACATGCAGAAGGCTCTCAACCTCTCCGAAGCGGGCAAGGAGGCCAAGGAGCAGCTTGCGGCAAAGGTGA
AGAAGTACCAGGACGAAATCAACCTCAAGCAGGATGAGCTCAAAAAGCTGAAGGACGACCTGGAAAAGCAGAGCGTGCTC
CTCTCCGATTCGGCGCGCAACGCCAAGGAGAAGGACTATCAGCAGAAGCTCAAGGAGTTCCAGCGGTTCACCAAGGATGC
CCAGGACGAGCTCCAGGCCAAGGACGAGGAGTTCACCAAGCGGATCATCGAGGAGCTGGAGCGGGTCATTCAGGACTTCG
GCCGCAAGAGCGGCTACACGATCATCTTCGTGAAGAACGAGAGCATGATCTTTGCCGACGATAAAGCCGACCTGACCGAG
GACGTTCTGAAGATTTTCAACGCCTCCCGGAAGAAATAA

Upstream 100 bases:

>100_bases
CCCGCGACGGCATCGACAAGTCAAGCGGGCGTTTCGAATTTTCAATCGGGAGCTTTTTCTAGAACCTGCGGGTTTCAGAG
CACCAGCTAAAGGAGAAACA

Downstream 100 bases:

>100_bases
GATGGCCGTGAGCAAGACGCTACAGGAACTGGCTGACTACCTCGGTGGAACGCTGGTCGGCGACGGCTCCCGCCAGATCG
TCGGCGTGGCGAGCCTCGAT

Product: outer membrane protein

Products: NA

Alternate protein names: Outer Membrane Protein; Outer Membrane Protein OmpH; OmpH-Like Outer Membrane Protein

Number of amino acids: Translated: 172; Mature: 172

Protein sequence:

>172_residues
MKRIIAATVVTLSLIAASAFGAEGGKLGFIDMQKALNLSEAGKEAKEQLAAKVKKYQDEINLKQDELKKLKDDLEKQSVL
LSDSARNAKEKDYQQKLKEFQRFTKDAQDELQAKDEEFTKRIIEELERVIQDFGRKSGYTIIFVKNESMIFADDKADLTE
DVLKIFNASRKK

Sequences:

>Translated_172_residues
MKRIIAATVVTLSLIAASAFGAEGGKLGFIDMQKALNLSEAGKEAKEQLAAKVKKYQDEINLKQDELKKLKDDLEKQSVL
LSDSARNAKEKDYQQKLKEFQRFTKDAQDELQAKDEEFTKRIIEELERVIQDFGRKSGYTIIFVKNESMIFADDKADLTE
DVLKIFNASRKK
>Mature_172_residues
MKRIIAATVVTLSLIAASAFGAEGGKLGFIDMQKALNLSEAGKEAKEQLAAKVKKYQDEINLKQDELKKLKDDLEKQSVL
LSDSARNAKEKDYQQKLKEFQRFTKDAQDELQAKDEEFTKRIIEELERVIQDFGRKSGYTIIFVKNESMIFADDKADLTE
DVLKIFNASRKK

Specific function: Unknown

COG id: COG2825

COG function: function code M; Outer membrane protein

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 19598; Mature: 19598

Theoretical pI: Translated: 8.79; Mature: 8.79

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
1.7 %Met     (Translated Protein)
1.7 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
1.7 %Met     (Mature Protein)
1.7 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MKRIIAATVVTLSLIAASAFGAEGGKLGFIDMQKALNLSEAGKEAKEQLAAKVKKYQDEI
CCHHHHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHCHHHHHHHHHHHHHHHHHHHHHHC
NLKQDELKKLKDDLEKQSVLLSDSARNAKEKDYQQKLKEFQRFTKDAQDELQAKDEEFTK
CCCHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHH
RIIEELERVIQDFGRKSGYTIIFVKNESMIFADDKADLTEDVLKIFNASRKK
HHHHHHHHHHHHHCCCCCCEEEEEECCCEEEECCCCHHHHHHHHHHHHCCCC
>Mature Secondary Structure
MKRIIAATVVTLSLIAASAFGAEGGKLGFIDMQKALNLSEAGKEAKEQLAAKVKKYQDEI
CCHHHHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHCHHHHHHHHHHHHHHHHHHHHHHC
NLKQDELKKLKDDLEKQSVLLSDSARNAKEKDYQQKLKEFQRFTKDAQDELQAKDEEFTK
CCCHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHH
RIIEELERVIQDFGRKSGYTIIFVKNESMIFADDKADLTEDVLKIFNASRKK
HHHHHHHHHHHHHCCCCCCEEEEEECCCEEEECCCCHHHHHHHHHHHHCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA