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The map label for this gene is yisS [H]

Identifier: 39997361

GI number: 39997361

Start: 2479151

End: 2480083

Strand: Reverse

Name: yisS [H]

Synonym: GSU2263

Alternate gene names: 39997361

Gene position: 2480083-2479151 (Counterclockwise)

Preceding gene: 39997362

Following gene: 39997360

Centisome position: 65.02

GC content: 61.31

Gene sequence:

>933_bases
ATGACGGACAAACTACGGACAGCGGTTATCGGCGTCGGCTACCTGGGACAGTTTCATGCGGAAAAGTATGCCCAGCTTCC
TGATACCGAGCTGGTGGCGGTGGTCGACACCGACATGAACCGGGCCGCAGAGGTGGCGGCCAAGGTCGGTACCAGTCCCT
GCACCGATTACCGTGAGCTGTTGGACCGGGTCGACGCCGTGAGCATTGTGGTGCCGACCCAGTACCATTTCGAGGTGGCG
CGGGCGTTTCTGGACCGTGGTGTCCACGTGCTGCTGGAAAAACCGATTACCACCACCATCGAGGAAGCGGATGAGCTGAT
CCGCATTGCCGATGAGCGGAAGGCGGTGTTCCAGGTGGGGCACCTTGAGCGCTTCAATCCGGTGGTCATGGCCCTTGACG
AGCTGCTGACCGGGCCGCGCTTCATCGAATCGCTCCGGATCGCTCCGTTCAAGCCCCGGGGGACCGATGTGAACGTGGTG
CTCGACCTCATGATCCACGACATCGACATCATCCAGCACATCATCGATTCGCCCGTGAAGCAGGTCAATTCCATCGGCGC
GCCGGTCTTCACCGACGAGGAAGACATTGCCAATGCCCGGATCCAGTTCGAGAACGGCTGTGTGGCCAACGTCACTGCCA
GCCGGATCAGCCTGAAGAGCGAGCGCAAGATGCGGATCTTCCAGGCCGACTCCTACATCACGGTCGACTTCCAGAATAAA
TCCCTGGCGGTCTTCCGCAAGGGGAGCGGCGAGATGTTCCCCGGCGTGCCCAATGTGGCCATGGACCAGAAGACGTTCGA
GCAGGGCGATGCCCTGAAGAGCGAGATCGCCTCGTTCCTGGACTGCATCAGGACCGGGGCGACCCCGGTGGTGAGTGGCC
GGGACGGCAAGCGGGCTCTGGAGACGGCGCTCATGATTACGAAACAACTGTAG

Upstream 100 bases:

>100_bases
TGGAGGAGGCATTGCGCCGCATCCGCGAGGAAATCCCTCCCTCGCAGGAGGTCGACCACTTTGTTACTTTTGCCGAGAAA
TCGGAAAGGGGACTCTGCAG

Downstream 100 bases:

>100_bases
ACGCGTTGAAGCGTTAACGGATTGATACCTTTGATCTGATGGTCAAGCACCACGTCCGCGTTTCAATGCGTATCCAAGGA
GGAAGACAATGATTCCAATG

Product: Gfo/Idh/MocA family oxidoreductase

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 310; Mature: 309

Protein sequence:

>310_residues
MTDKLRTAVIGVGYLGQFHAEKYAQLPDTELVAVVDTDMNRAAEVAAKVGTSPCTDYRELLDRVDAVSIVVPTQYHFEVA
RAFLDRGVHVLLEKPITTTIEEADELIRIADERKAVFQVGHLERFNPVVMALDELLTGPRFIESLRIAPFKPRGTDVNVV
LDLMIHDIDIIQHIIDSPVKQVNSIGAPVFTDEEDIANARIQFENGCVANVTASRISLKSERKMRIFQADSYITVDFQNK
SLAVFRKGSGEMFPGVPNVAMDQKTFEQGDALKSEIASFLDCIRTGATPVVSGRDGKRALETALMITKQL

Sequences:

>Translated_310_residues
MTDKLRTAVIGVGYLGQFHAEKYAQLPDTELVAVVDTDMNRAAEVAAKVGTSPCTDYRELLDRVDAVSIVVPTQYHFEVA
RAFLDRGVHVLLEKPITTTIEEADELIRIADERKAVFQVGHLERFNPVVMALDELLTGPRFIESLRIAPFKPRGTDVNVV
LDLMIHDIDIIQHIIDSPVKQVNSIGAPVFTDEEDIANARIQFENGCVANVTASRISLKSERKMRIFQADSYITVDFQNK
SLAVFRKGSGEMFPGVPNVAMDQKTFEQGDALKSEIASFLDCIRTGATPVVSGRDGKRALETALMITKQL
>Mature_309_residues
TDKLRTAVIGVGYLGQFHAEKYAQLPDTELVAVVDTDMNRAAEVAAKVGTSPCTDYRELLDRVDAVSIVVPTQYHFEVAR
AFLDRGVHVLLEKPITTTIEEADELIRIADERKAVFQVGHLERFNPVVMALDELLTGPRFIESLRIAPFKPRGTDVNVVL
DLMIHDIDIIQHIIDSPVKQVNSIGAPVFTDEEDIANARIQFENGCVANVTASRISLKSERKMRIFQADSYITVDFQNKS
LAVFRKGSGEMFPGVPNVAMDQKTFEQGDALKSEIASFLDCIRTGATPVVSGRDGKRALETALMITKQL

Specific function: Unknown

COG id: COG0673

COG function: function code R; Predicted dehydrogenases and related proteins

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the gfo/idh/mocA family [H]

Homologues:

Organism=Escherichia coli, GI1787574, Length=240, Percent_Identity=28.75, Blast_Score=74, Evalue=2e-14,
Organism=Escherichia coli, GI87081947, Length=139, Percent_Identity=30.9352517985612, Blast_Score=67, Evalue=2e-12,
Organism=Escherichia coli, GI1787307, Length=303, Percent_Identity=24.0924092409241, Blast_Score=64, Evalue=2e-11,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR016040
- InterPro:   IPR000683
- InterPro:   IPR004104 [H]

Pfam domain/function: PF01408 GFO_IDH_MocA; PF02894 GFO_IDH_MocA_C [H]

EC number: 1.-.-.- [C]

Molecular weight: Translated: 34334; Mature: 34203

Theoretical pI: Translated: 5.00; Mature: 5.00

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.0 %Cys     (Translated Protein)
2.6 %Met     (Translated Protein)
3.5 %Cys+Met (Translated Protein)
1.0 %Cys     (Mature Protein)
2.3 %Met     (Mature Protein)
3.2 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MTDKLRTAVIGVGYLGQFHAEKYAQLPDTELVAVVDTDMNRAAEVAAKVGTSPCTDYREL
CCCHHHHHHHHHHHHHHHHHHHHHCCCCCEEEEEEECCHHHHHHHHHHCCCCCCHHHHHH
LDRVDAVSIVVPTQYHFEVARAFLDRGVHVLLEKPITTTIEEADELIRIADERKAVFQVG
HHHCCEEEEEECCHHHHHHHHHHHHCCCEEEECCCCHHHHHHHHHHHHHHHHHHHHHHHH
HLERFNPVVMALDELLTGPRFIESLRIAPFKPRGTDVNVVLDLMIHDIDIIQHIIDSPVK
CHHHCCHHHHHHHHHHCCHHHHHHCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHH
QVNSIGAPVFTDEEDIANARIQFENGCVANVTASRISLKSERKMRIFQADSYITVDFQNK
HHHHCCCCCCCCCHHHCCCEEEECCCEEEECHHHHHHHCCCCCEEEEECCCEEEEEECCC
SLAVFRKGSGEMFPGVPNVAMDQKTFEQGDALKSEIASFLDCIRTGATPVVSGRDGKRAL
EEEEEECCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHCCCCCEECCCCHHHHH
ETALMITKQL
HHHHHHHHCC
>Mature Secondary Structure 
TDKLRTAVIGVGYLGQFHAEKYAQLPDTELVAVVDTDMNRAAEVAAKVGTSPCTDYREL
CCHHHHHHHHHHHHHHHHHHHHHCCCCCEEEEEEECCHHHHHHHHHHCCCCCCHHHHHH
LDRVDAVSIVVPTQYHFEVARAFLDRGVHVLLEKPITTTIEEADELIRIADERKAVFQVG
HHHCCEEEEEECCHHHHHHHHHHHHCCCEEEECCCCHHHHHHHHHHHHHHHHHHHHHHHH
HLERFNPVVMALDELLTGPRFIESLRIAPFKPRGTDVNVVLDLMIHDIDIIQHIIDSPVK
CHHHCCHHHHHHHHHHCCHHHHHHCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHH
QVNSIGAPVFTDEEDIANARIQFENGCVANVTASRISLKSERKMRIFQADSYITVDFQNK
HHHHCCCCCCCCCHHHCCCEEEECCCEEEECHHHHHHHCCCCCEEEEECCCEEEEEECCC
SLAVFRKGSGEMFPGVPNVAMDQKTFEQGDALKSEIASFLDCIRTGATPVVSGRDGKRAL
EEEEEECCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHCCCCCEECCCCHHHHH
ETALMITKQL
HHHHHHHHCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 9353932; 9384377; 8407808 [H]