| Definition | Geobacter sulfurreducens PCA chromosome, complete genome. |
|---|---|
| Accession | NC_002939 |
| Length | 3,814,139 |
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The map label for this gene is 39997346
Identifier: 39997346
GI number: 39997346
Start: 2463038
End: 2463718
Strand: Reverse
Name: 39997346
Synonym: GSU2248
Alternate gene names: NA
Gene position: 2463718-2463038 (Counterclockwise)
Preceding gene: 39997347
Following gene: 39997345
Centisome position: 64.59
GC content: 51.4
Gene sequence:
>681_bases ATGGCCGTCACATGGGTGGAAGCCGGCAAGCTTTTCCCGGAAGCGATAAAGAAACTCCAGCACGTCAGAGTGCTGATGGA CATAGGTTGCGGCATCAGGCCCCAACAGTTCCTCCGGCCGCTGGTACATATCTGTTGCGAACCTTTTGGACAATATGTCG AACACCTTCAGACTCTTATCAAGGAGAGGACCGATAGGAACTATGTGGTGATAAATGCCACTTGGGCCGAAACCGTGAGA CTGTTTCCTCCCAAGTCGGTCGATACGGTCATCCTGAACGACGTAATCGAGCATCTGGAGAAGGAGGAGGCTGTCAATCT TCTGAGGGCCACAGAGCGTATTGCTCGCAGACAGATCGCCCTGTTCACTCCTCTGGGATTTATGCCCCAGAGCCATCCAG ACGGAAAGGACGCGTGGGGGCTCGATGGCGGAGCGTGGCAGGAGCACAAGTCCGGCTGGCAGCCGGACGATTTCGACGAA ACGTGGGATATTGTTGCAGCCGAAGTATTTCATAAAAGCGACAGTATGGGGAATGAACTCGAAAAGCCTTTTGGGGCACT TTGGGCTATCAAGACGTTTGACGATGAATTGTCCACAGGACAGGGTGTTCTGTCAGTTAAGCAAAAAATGTATTCTCTTG TTGACTACACGTTCAAGAAGATGTCAAAGCTTACAAGATAG
Upstream 100 bases:
>100_bases CAAAGGCTTCGCAGCATTCTTTCTCCTTCGCGGTGCGAATGACAGTGGTGTTGGCGCAGTTTTTACATGAAATATGTCCG TAAAGATAGGGAGGTCCCGT
Downstream 100 bases:
>100_bases CGCTTGAGACAGTGTTACAAGTGGAGAGTTCATGAGCCACAGAATTAATGTGCTGATTGTCGGGGCCAGCGGCATGCTGG GGCATACTTTGTTCGGTCGT
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 226; Mature: 225
Protein sequence:
>226_residues MAVTWVEAGKLFPEAIKKLQHVRVLMDIGCGIRPQQFLRPLVHICCEPFGQYVEHLQTLIKERTDRNYVVINATWAETVR LFPPKSVDTVILNDVIEHLEKEEAVNLLRATERIARRQIALFTPLGFMPQSHPDGKDAWGLDGGAWQEHKSGWQPDDFDE TWDIVAAEVFHKSDSMGNELEKPFGALWAIKTFDDELSTGQGVLSVKQKMYSLVDYTFKKMSKLTR
Sequences:
>Translated_226_residues MAVTWVEAGKLFPEAIKKLQHVRVLMDIGCGIRPQQFLRPLVHICCEPFGQYVEHLQTLIKERTDRNYVVINATWAETVR LFPPKSVDTVILNDVIEHLEKEEAVNLLRATERIARRQIALFTPLGFMPQSHPDGKDAWGLDGGAWQEHKSGWQPDDFDE TWDIVAAEVFHKSDSMGNELEKPFGALWAIKTFDDELSTGQGVLSVKQKMYSLVDYTFKKMSKLTR >Mature_225_residues AVTWVEAGKLFPEAIKKLQHVRVLMDIGCGIRPQQFLRPLVHICCEPFGQYVEHLQTLIKERTDRNYVVINATWAETVRL FPPKSVDTVILNDVIEHLEKEEAVNLLRATERIARRQIALFTPLGFMPQSHPDGKDAWGLDGGAWQEHKSGWQPDDFDET WDIVAAEVFHKSDSMGNELEKPFGALWAIKTFDDELSTGQGVLSVKQKMYSLVDYTFKKMSKLTR
Specific function: Unknown
COG id: COG0500
COG function: function code QR; SAM-dependent methyltransferases
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 25870; Mature: 25739
Theoretical pI: Translated: 6.17; Mature: 6.17
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.3 %Cys (Translated Protein) 2.7 %Met (Translated Protein) 4.0 %Cys+Met (Translated Protein) 1.3 %Cys (Mature Protein) 2.2 %Met (Mature Protein) 3.6 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MAVTWVEAGKLFPEAIKKLQHVRVLMDIGCGIRPQQFLRPLVHICCEPFGQYVEHLQTLI CEEEEHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHH KERTDRNYVVINATWAETVRLFPPKSVDTVILNDVIEHLEKEEAVNLLRATERIARRQIA HHHCCCCEEEEEEHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH LFTPLGFMPQSHPDGKDAWGLDGGAWQEHKSGWQPDDFDETWDIVAAEVFHKSDSMGNEL HHCCCCCCCCCCCCCCCCCCCCCCCCHHHHCCCCCCCCCHHHHHHHHHHHHHCCCCCHHH EKPFGALWAIKTFDDELSTGQGVLSVKQKMYSLVDYTFKKMSKLTR HHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHCC >Mature Secondary Structure AVTWVEAGKLFPEAIKKLQHVRVLMDIGCGIRPQQFLRPLVHICCEPFGQYVEHLQTLI EEEEHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHH KERTDRNYVVINATWAETVRLFPPKSVDTVILNDVIEHLEKEEAVNLLRATERIARRQIA HHHCCCCEEEEEEHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH LFTPLGFMPQSHPDGKDAWGLDGGAWQEHKSGWQPDDFDETWDIVAAEVFHKSDSMGNEL HHCCCCCCCCCCCCCCCCCCCCCCCCHHHHCCCCCCCCCHHHHHHHHHHHHHCCCCCHHH EKPFGALWAIKTFDDELSTGQGVLSVKQKMYSLVDYTFKKMSKLTR HHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHCC
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA