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The map label for this gene is yloC [H]

Identifier: 39997337

GI number: 39997337

Start: 2453748

End: 2454626

Strand: Reverse

Name: yloC [H]

Synonym: GSU2239

Alternate gene names: 39997337

Gene position: 2454626-2453748 (Counterclockwise)

Preceding gene: 39997338

Following gene: 39997336

Centisome position: 64.36

GC content: 61.77

Gene sequence:

>879_bases
ATGATCAAGAGCATGACGGGCTACGGCAAGTCCGTGGTCGAAACCGATACCGGGCGCACCATTGTCGAAATTCGTTCGGT
GAATCATCGTTACGGCGAGGTTTACGTAAAGATGCCGCGTACGCTTCTTGCCTTCGAGAATGACGTTCGCAAGGCAGTGG
GCGACCGGCTCAAGCGCGGAAAAATTGAGGTCTTCGTTCAACGGGAGGAGGCGGTGGGGGGAGAGAACCTGCCCAACGTC
AATGTTCCTCTGGCCAAGGCCTATCGGGATGCCTTCGAACAACTGAAACGCGAACTCGACCTTGCTGATCCCGTGACGCT
GCCGCTCATCCTGTCCCAACGCGATGTCCTGTCCGCCCGGGAAGAGGACGGCAACGAGGACGCCCTGCGCGGTGAACTCC
TCGGCGCAGTGCGAGGAGCCGTGGAGGCCATGGAAACCATGCGCCTGCGGGAGGGAGAGGCGCTGCTCGCCGACCTGACG
GCGCGGCGCCGGACCCTGTCCGACATCATCGAGCGGATTGCGCTGCGCGCGCCGGCCATGGTTGCCGAGTACGCCGCCCG
CCTGCGTGAACGGTTGACGCAACTCCTGAGCGGAACCACGCTGGACGAGACCCGCTTCGCCCAGGAAGTCGCACTTATGG
CCGACCGCAGCGACATTACCGAGGAGCTGGTTCGTTTCCGTAGTCACCTGGTCCAGTTCGACGACACCCTGAAGCTGTCC
GAACCGGTGGGGCGCAAACTCGACTTCCTGATGCAGGAGTTCAACCGCGAGGTGAACACCATCGGTTCCAAGGCGGGAGA
TGCGGACACCGCAGCGCTGGTGGTGGAGCTCAAGGCCGAGTTGGAGAAGATTCGCGAGCAGGTCCAGAATATTGAATAG

Upstream 100 bases:

>100_bases
CCGATGCCTGGCGCTGGGAAAAGAAAATCAGCGGCAACTAGTGGCCGATTGTGGTGGCGCACGCGCTTCCCTTATCTTAG
TTCACACAGATGGAGCATTC

Downstream 100 bases:

>100_bases
CGTTTGCCACGAGCGGGGTCTTGATGAAACGTGAAGGGGTTTTATACATACTGTCGGCACCGTCGGGGGCGGGTAAAACC
ACGCTGTGCAGAGAAATAAT

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 292; Mature: 292

Protein sequence:

>292_residues
MIKSMTGYGKSVVETDTGRTIVEIRSVNHRYGEVYVKMPRTLLAFENDVRKAVGDRLKRGKIEVFVQREEAVGGENLPNV
NVPLAKAYRDAFEQLKRELDLADPVTLPLILSQRDVLSAREEDGNEDALRGELLGAVRGAVEAMETMRLREGEALLADLT
ARRRTLSDIIERIALRAPAMVAEYAARLRERLTQLLSGTTLDETRFAQEVALMADRSDITEELVRFRSHLVQFDDTLKLS
EPVGRKLDFLMQEFNREVNTIGSKAGDADTAALVVELKAELEKIREQVQNIE

Sequences:

>Translated_292_residues
MIKSMTGYGKSVVETDTGRTIVEIRSVNHRYGEVYVKMPRTLLAFENDVRKAVGDRLKRGKIEVFVQREEAVGGENLPNV
NVPLAKAYRDAFEQLKRELDLADPVTLPLILSQRDVLSAREEDGNEDALRGELLGAVRGAVEAMETMRLREGEALLADLT
ARRRTLSDIIERIALRAPAMVAEYAARLRERLTQLLSGTTLDETRFAQEVALMADRSDITEELVRFRSHLVQFDDTLKLS
EPVGRKLDFLMQEFNREVNTIGSKAGDADTAALVVELKAELEKIREQVQNIE
>Mature_292_residues
MIKSMTGYGKSVVETDTGRTIVEIRSVNHRYGEVYVKMPRTLLAFENDVRKAVGDRLKRGKIEVFVQREEAVGGENLPNV
NVPLAKAYRDAFEQLKRELDLADPVTLPLILSQRDVLSAREEDGNEDALRGELLGAVRGAVEAMETMRLREGEALLADLT
ARRRTLSDIIERIALRAPAMVAEYAARLRERLTQLLSGTTLDETRFAQEVALMADRSDITEELVRFRSHLVQFDDTLKLS
EPVGRKLDFLMQEFNREVNTIGSKAGDADTAALVVELKAELEKIREQVQNIE

Specific function: Unknown

COG id: COG1561

COG function: function code S; Uncharacterized stress-induced protein

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the UPF0701 family [H]

Homologues:

Organism=Escherichia coli, GI1790075, Length=294, Percent_Identity=35.7142857142857, Blast_Score=147, Evalue=1e-36,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR005229
- InterPro:   IPR013551
- InterPro:   IPR013527 [H]

Pfam domain/function: PF08340 DUF1732; PF03755 YicC_N [H]

EC number: NA

Molecular weight: Translated: 32868; Mature: 32868

Theoretical pI: Translated: 4.92; Mature: 4.92

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
2.7 %Met     (Translated Protein)
2.7 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
2.7 %Met     (Mature Protein)
2.7 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MIKSMTGYGKSVVETDTGRTIVEIRSVNHRYGEVYVKMPRTLLAFENDVRKAVGDRLKRG
CCCCCCCCCCHHEECCCCCEEEEHHHCCCHHHHHHHHCHHHHHHHHHHHHHHHHHHHHCC
KIEVFVQREEAVGGENLPNVNVPLAKAYRDAFEQLKRELDLADPVTLPLILSQRDVLSAR
CEEEEEEHHHHCCCCCCCCCCCHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHH
EEDGNEDALRGELLGAVRGAVEAMETMRLREGEALLADLTARRRTLSDIIERIALRAPAM
HCCCCHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHCHHH
VAEYAARLRERLTQLLSGTTLDETRFAQEVALMADRSDITEELVRFRSHLVQFDDTLKLS
HHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCC
EPVGRKLDFLMQEFNREVNTIGSKAGDADTAALVVELKAELEKIREQVQNIE
CHHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHHHHCCC
>Mature Secondary Structure
MIKSMTGYGKSVVETDTGRTIVEIRSVNHRYGEVYVKMPRTLLAFENDVRKAVGDRLKRG
CCCCCCCCCCHHEECCCCCEEEEHHHCCCHHHHHHHHCHHHHHHHHHHHHHHHHHHHHCC
KIEVFVQREEAVGGENLPNVNVPLAKAYRDAFEQLKRELDLADPVTLPLILSQRDVLSAR
CEEEEEEHHHHCCCCCCCCCCCHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHH
EEDGNEDALRGELLGAVRGAVEAMETMRLREGEALLADLTARRRTLSDIIERIALRAPAM
HCCCCHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHCHHH
VAEYAARLRERLTQLLSGTTLDETRFAQEVALMADRSDITEELVRFRSHLVQFDDTLKLS
HHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCC
EPVGRKLDFLMQEFNREVNTIGSKAGDADTAALVVELKAELEKIREQVQNIE
CHHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHHHHCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 9534248; 9384377 [H]