Definition Geobacter sulfurreducens PCA chromosome, complete genome.
Accession NC_002939
Length 3,814,139

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The map label for this gene is 39997288

Identifier: 39997288

GI number: 39997288

Start: 2401250

End: 2402416

Strand: Reverse

Name: 39997288

Synonym: GSU2190

Alternate gene names: NA

Gene position: 2402416-2401250 (Counterclockwise)

Preceding gene: 39997289

Following gene: 39997286

Centisome position: 62.99

GC content: 65.12

Gene sequence:

>1167_bases
ATGCGCGACCAGGTGTCTGTCTACACGAACAAACTCATTGCCGACCGCTCGGCACATGCCCAAGGCATAGCCATAGCAGC
CCAGGACGACGTCCTCATTGCCGGGGGTGCCCCTGACCTGGCCCGGCTTGCTGGAGACGTTCTGTCCCGGCTCACCTGCC
TCGGCATGGTGGTGGCCTGCCCATCGCTCCCCTTTGCCGATTTCCTGGTGGCCCGCGCCCCGGCCGGGGAGTCGTGCATC
GTGCCCCGTGACACGGAAACCCGGACCTTTCTGCACGATATCCCCTTTCTGCGCCGCAGCGACCTTGGCGCCGATCCCGC
TCCCGTTATCGCCCGCCTCCTTGGCAGCCGCAAGGGAGTGGTCGTGGAAGGGGTAGGGATCGTGGCCAGCGGAGCCCTTA
CCGTAGAACAGGCCTATATCAACTACTCCTCGGTATTTCATTCGACCTTCGTGAAGTATCTCCAGGATGTGCTTCACCAC
GGCTTCATCCTGCCGGGGGAGGCGGAGGCATTTGCCGCGTTCCGCAGCCAGTGGCTCCGGCCGCTTACGGATGAAGGGCT
CGCCTTCCGGTCCGGCCCCTTGGCGGAACGGGACGAGATCCTCGACGAAATCGCCACGGTGGGGCGCTACACGGTTGAAC
GGGGGCTGGTGGATTCCTTCTTCGGCAACATTTCATGCCGTGCCGGCGAGGTGATCTACATCTCCCAGACCGCGGCGAGC
CTGGATTCCCTGGCCGGCTGCATCGACCCGGTCCCCACGGACAATTCATCCACCTTCGGCATTACCGCCTCCAGCGAACT
CCTGGCCCACCGGCGGATTTACGAGGCTACCGGCGCTGCGACCATTCTTCACGGTCACCCCAAGTTCGCGGTGATCATGA
GCATGGAGTGCGCGGAAGAAGGGTGCGCCATTACCGACTGCTGGAAGGAGTGCGACCGGGTGCGGTTTCTCGGCGATACG
CCGGTGGTGGCGGGCGAGATCGGCGCCGGCGGGCTTGCCAGGAGGGTGCCGCCGGCGATCGCGGGCCCGCGCAAGGCGGT
GGTCTATGGCCACGGGGTCTTTACGGTGGGAGAGACGGACTTTGCCGACGCGTTCCGGGCCCTGGTGTCCGTGGAGAACT
GGTGCCGCGGGGAATATTTTCGCCGGCTGGAAGAGCGGCTCGGGTGA

Upstream 100 bases:

>100_bases
GAACCGATACGTGAGCAATGCTTATCTATCTGGTTGTTGAATAACAATTTTTGCTGGCCGGCATTGATTGTCGGTAGCAA
CGAAATAAACGGGTAAGTAT

Downstream 100 bases:

>100_bases
GCGGGCTCAGGATATCTGTCTGGGGAAGCTGGCGGTAAAGGTGGTGCCTTCGCGCTCGGTGCTCGTAAAGGTGATGGTAC
CCTTCAGGTAGCGTTCGCCG

Product: class II aldolase and adducin N-terminal domain-containing protein

Products: NA

Alternate protein names: L-Fuculose Phosphate Aldolase; Class II Aldolase/Adducin-Like; Aldolase Domain-Containing Protein; Aldolase Class II; Aldolase Class II Protein

Number of amino acids: Translated: 388; Mature: 388

Protein sequence:

>388_residues
MRDQVSVYTNKLIADRSAHAQGIAIAAQDDVLIAGGAPDLARLAGDVLSRLTCLGMVVACPSLPFADFLVARAPAGESCI
VPRDTETRTFLHDIPFLRRSDLGADPAPVIARLLGSRKGVVVEGVGIVASGALTVEQAYINYSSVFHSTFVKYLQDVLHH
GFILPGEAEAFAAFRSQWLRPLTDEGLAFRSGPLAERDEILDEIATVGRYTVERGLVDSFFGNISCRAGEVIYISQTAAS
LDSLAGCIDPVPTDNSSTFGITASSELLAHRRIYEATGAATILHGHPKFAVIMSMECAEEGCAITDCWKECDRVRFLGDT
PVVAGEIGAGGLARRVPPAIAGPRKAVVYGHGVFTVGETDFADAFRALVSVENWCRGEYFRRLEERLG

Sequences:

>Translated_388_residues
MRDQVSVYTNKLIADRSAHAQGIAIAAQDDVLIAGGAPDLARLAGDVLSRLTCLGMVVACPSLPFADFLVARAPAGESCI
VPRDTETRTFLHDIPFLRRSDLGADPAPVIARLLGSRKGVVVEGVGIVASGALTVEQAYINYSSVFHSTFVKYLQDVLHH
GFILPGEAEAFAAFRSQWLRPLTDEGLAFRSGPLAERDEILDEIATVGRYTVERGLVDSFFGNISCRAGEVIYISQTAAS
LDSLAGCIDPVPTDNSSTFGITASSELLAHRRIYEATGAATILHGHPKFAVIMSMECAEEGCAITDCWKECDRVRFLGDT
PVVAGEIGAGGLARRVPPAIAGPRKAVVYGHGVFTVGETDFADAFRALVSVENWCRGEYFRRLEERLG
>Mature_388_residues
MRDQVSVYTNKLIADRSAHAQGIAIAAQDDVLIAGGAPDLARLAGDVLSRLTCLGMVVACPSLPFADFLVARAPAGESCI
VPRDTETRTFLHDIPFLRRSDLGADPAPVIARLLGSRKGVVVEGVGIVASGALTVEQAYINYSSVFHSTFVKYLQDVLHH
GFILPGEAEAFAAFRSQWLRPLTDEGLAFRSGPLAERDEILDEIATVGRYTVERGLVDSFFGNISCRAGEVIYISQTAAS
LDSLAGCIDPVPTDNSSTFGITASSELLAHRRIYEATGAATILHGHPKFAVIMSMECAEEGCAITDCWKECDRVRFLGDT
PVVAGEIGAGGLARRVPPAIAGPRKAVVYGHGVFTVGETDFADAFRALVSVENWCRGEYFRRLEERLG

Specific function: Unknown

COG id: COG0235

COG function: function code G; Ribulose-5-phosphate 4-epimerase and related epimerases and aldolases

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 41633; Mature: 41633

Theoretical pI: Translated: 5.14; Mature: 5.14

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

2.6 %Cys     (Translated Protein)
1.0 %Met     (Translated Protein)
3.6 %Cys+Met (Translated Protein)
2.6 %Cys     (Mature Protein)
1.0 %Met     (Mature Protein)
3.6 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MRDQVSVYTNKLIADRSAHAQGIAIAAQDDVLIAGGAPDLARLAGDVLSRLTCLGMVVAC
CCCCHHHHHHHHHHCCCCCCCCEEEEECCCEEEECCCCHHHHHHHHHHHHHHHHHHHHHC
PSLPFADFLVARAPAGESCIVPRDTETRTFLHDIPFLRRSDLGADPAPVIARLLGSRKGV
CCCCHHHHHHHCCCCCCCEECCCCCCHHHHHHHCCCHHHCCCCCCHHHHHHHHHCCCCCE
VVEGVGIVASGALTVEQAYINYSSVFHSTFVKYLQDVLHHGFILPGEAEAFAAFRSQWLR
EEECCCEEECCCEEEHHHHHHHHHHHHHHHHHHHHHHHHCCEECCCCHHHHHHHHHHHCC
PLTDEGLAFRSGPLAERDEILDEIATVGRYTVERGLVDSFFGNISCRAGEVIYISQTAAS
CCCCCCCEECCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCEECCCCEEEEECHHHH
LDSLAGCIDPVPTDNSSTFGITASSELLAHRRIYEATGAATILHGHPKFAVIMSMECAEE
HHHHHHHCCCCCCCCCCEEEEECHHHHHHHHHHHHHCCCEEEEECCCCEEEEEEEHHHHC
GCAITDCWKECDRVRFLGDTPVVAGEIGAGGLARRVPPAIAGPRKAVVYGHGVFTVGETD
CCCHHHHHHHHHHEEECCCCCEEEECCCCCCHHHHCCCCCCCCCEEEEEECEEEEECCCH
FADAFRALVSVENWCRGEYFRRLEERLG
HHHHHHHHHHHHHHHHHHHHHHHHHHCC
>Mature Secondary Structure
MRDQVSVYTNKLIADRSAHAQGIAIAAQDDVLIAGGAPDLARLAGDVLSRLTCLGMVVAC
CCCCHHHHHHHHHHCCCCCCCCEEEEECCCEEEECCCCHHHHHHHHHHHHHHHHHHHHHC
PSLPFADFLVARAPAGESCIVPRDTETRTFLHDIPFLRRSDLGADPAPVIARLLGSRKGV
CCCCHHHHHHHCCCCCCCEECCCCCCHHHHHHHCCCHHHCCCCCCHHHHHHHHHCCCCCE
VVEGVGIVASGALTVEQAYINYSSVFHSTFVKYLQDVLHHGFILPGEAEAFAAFRSQWLR
EEECCCEEECCCEEEHHHHHHHHHHHHHHHHHHHHHHHHCCEECCCCHHHHHHHHHHHCC
PLTDEGLAFRSGPLAERDEILDEIATVGRYTVERGLVDSFFGNISCRAGEVIYISQTAAS
CCCCCCCEECCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCEECCCCEEEEECHHHH
LDSLAGCIDPVPTDNSSTFGITASSELLAHRRIYEATGAATILHGHPKFAVIMSMECAEE
HHHHHHHCCCCCCCCCCEEEEECHHHHHHHHHHHHHCCCEEEEECCCCEEEEEEEHHHHC
GCAITDCWKECDRVRFLGDTPVVAGEIGAGGLARRVPPAIAGPRKAVVYGHGVFTVGETD
CCCHHHHHHHHHHEEECCCCCEEEECCCCCCHHHHCCCCCCCCCEEEEEECEEEEECCCH
FADAFRALVSVENWCRGEYFRRLEERLG
HHHHHHHHHHHHHHHHHHHHHHHHHHCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: NA