| Definition | Geobacter sulfurreducens PCA chromosome, complete genome. |
|---|---|
| Accession | NC_002939 |
| Length | 3,814,139 |
Click here to switch to the map view.
The map label for this gene is 39997244
Identifier: 39997244
GI number: 39997244
Start: 2363292
End: 2363678
Strand: Reverse
Name: 39997244
Synonym: GSU2146
Alternate gene names: NA
Gene position: 2363678-2363292 (Counterclockwise)
Preceding gene: 39997245
Following gene: 39997243
Centisome position: 61.97
GC content: 49.61
Gene sequence:
>387_bases ATGAAACGTTTTGAAATCACCGTGAAGTCAGAAAAGTCATTTGATCAGGCCGTATCCGCAATTGAAGAGAAAGCGGCAGA AAAAGGGTTTCGTGTTTTGCATACGCACGACGTTGCCAAGACGCTGACGGAAAAAGGGTTCGCCCGTGAGCCGTTGAAGA TTGTCGAAATCTGCAATGCCAAGTACGCCAGTCAGGTTCTTGAGAAGGATGTCAGAATCGCCTTGATGCTTCCTTGCCCG ATCAGCATTTACGAGCAAAAGGGAGAGACGTTCATCAGCACCATGCTGCCGACGGCCATCGTGGATTTTTTCCCTGAAGC CGGCATAGAGACCCTGGCGTCGGATGTTGAGCGGATTGTGCTTGATATCATCAATCTCGCGAAGTGA
Upstream 100 bases:
>100_bases GCGTCGTTACTGGTAACGCTCAACAGCTTGCGACTGTTGCGAGTCAATGACATACACTGAGGATCAACCCAACTAAGCTT GCTTACAAAGGGAGGTCAAC
Downstream 100 bases:
>100_bases GAAGAAAGCTGTCATTGGCAAGGCCCGATTCCCCTCTGTCGGAGCTCATGCACAAGGGATGATCGACATGAATAATTACA TTCTCCTTGTGGAGGACGAT
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 128; Mature: 128
Protein sequence:
>128_residues MKRFEITVKSEKSFDQAVSAIEEKAAEKGFRVLHTHDVAKTLTEKGFAREPLKIVEICNAKYASQVLEKDVRIALMLPCP ISIYEQKGETFISTMLPTAIVDFFPEAGIETLASDVERIVLDIINLAK
Sequences:
>Translated_128_residues MKRFEITVKSEKSFDQAVSAIEEKAAEKGFRVLHTHDVAKTLTEKGFAREPLKIVEICNAKYASQVLEKDVRIALMLPCP ISIYEQKGETFISTMLPTAIVDFFPEAGIETLASDVERIVLDIINLAK >Mature_128_residues MKRFEITVKSEKSFDQAVSAIEEKAAEKGFRVLHTHDVAKTLTEKGFAREPLKIVEICNAKYASQVLEKDVRIALMLPCP ISIYEQKGETFISTMLPTAIVDFFPEAGIETLASDVERIVLDIINLAK
Specific function: Unknown
COG id: COG3439
COG function: function code S; Uncharacterized conserved protein
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 14329; Mature: 14329
Theoretical pI: Translated: 5.29; Mature: 5.29
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.6 %Cys (Translated Protein) 2.3 %Met (Translated Protein) 3.9 %Cys+Met (Translated Protein) 1.6 %Cys (Mature Protein) 2.3 %Met (Mature Protein) 3.9 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MKRFEITVKSEKSFDQAVSAIEEKAAEKGFRVLHTHDVAKTLTEKGFAREPLKIVEICNA CCCEEEEECCCCCHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHCCCCCCCHHHHHHHCC KYASQVLEKDVRIALMLPCPISIYEQKGETFISTMLPTAIVDFFPEAGIETLASDVERIV HHHHHHHHCCCCEEEECCCCHHHHHHCCHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHH LDIINLAK HHHHHHCC >Mature Secondary Structure MKRFEITVKSEKSFDQAVSAIEEKAAEKGFRVLHTHDVAKTLTEKGFAREPLKIVEICNA CCCEEEEECCCCCHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHCCCCCCCHHHHHHHCC KYASQVLEKDVRIALMLPCPISIYEQKGETFISTMLPTAIVDFFPEAGIETLASDVERIV HHHHHHHHCCCCEEEECCCCHHHHHHCCHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHH LDIINLAK HHHHHHCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA