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The map label for this gene is 39997174

Identifier: 39997174

GI number: 39997174

Start: 2281463

End: 2282884

Strand: Reverse

Name: 39997174

Synonym: GSU2076

Alternate gene names: NA

Gene position: 2282884-2281463 (Counterclockwise)

Preceding gene: 39997176

Following gene: 39997173

Centisome position: 59.85

GC content: 60.83

Gene sequence:

>1422_bases
ATGAAGAAAAAGGTACTGATTGGCGCATCGCTCGCAGCCGTTGTCTTAACCGGCGCAGCAATGGTGGGTGCAGCTGTTCC
GCCCCCGCCGGTAAACCAGTTCCTGGGGATCTACGATACCAAGTTTCCCAACCTGACCAAAGCCGACTGTCTCGAGTGTC
ACGTCAGCGACACGGTGCTCGTCCAGCAGCATCACGCCCTGATCAACACGGTTACGCCGCCGGCAAGCTGCATCAATACC
TCCGGCACTGTCCCCCCGACCCTTGCCACCGGTTGCCACGTCATGGTTCCCGACGGCTCGGGCGGTTTTACCTTCCAGGA
TTTCAGAAACTGTTTCAACTGCCACACCCAGACTCCGCACCACACCTCTCCCGCCGCTGTTGCCAAGGACTGCAAGTACT
GCCACGGCAACTTCATCGACAACCCGCTTGACGGCCACTACATTCCGACCTACAGCGCAAGCTCCGTCACTCCGATGCCG
AGCGGCAGGTCTGTAACCGCTACGGATGGCAATGTTGTTATCGTTCAGGGCTGCGAAGCATGCCACCAGGCCGCACCCAA
CGCCATCGATCCGAAGACCAATACGGTCCGCCCGATCTTCAGCAACCAGGATACTCACCACGGCACCGGCATCACCGACT
GCAACCTCTGCCACAATACGTCCTCCAATGTACCGATCCGCCAGTGCGAGGTCTGCCACGGCGTGAACTCGCTCCACAAT
ATCCAGAAGGACAGCCCCAATGCCGCCAACCTCGGCACGGTCAAGCCGGGGCTGGAGGATCTGGGCTGGGGCCACATCGG
CAACAACTGGGACTGCCAGGGCTGCCACTGGTCCTGGTTCGGTAATTCCTCGCCCTACACCAATGCCACCGTGCCCGCCA
TCAACGGCCAGAGCAGCTACACGGTCACCGCGGGCAAGGAAGCCGTCCTGACCATCGTCGGCTCCAGCTTCGTCAACGTC
GGACCCGACGGCGTGACCACCTATCAGCCCACTGTTGCGCTCGTCAGCGGCAGCACGAGCCTGACACTCACTCCCTTCTC
GGTCACCGAAAGCGAGATCAAGGTGTCCGTACCCGCCCTCGTTGAAGGCGTCTACGAGCTCCGCATCACCAAGGCCAACA
AGGTCAGCAACCTTGCCAAGCTGACCGTCGCGCCGGCGCGGATCATTGCCTCCGCCACCCTTGCGACTGGCAAGACCCTT
ACCATTACCGGCACCGGTTTCGGACCGGCACCGAGCTCCGAGTACGACGCCGGTATCGGTGTGTACGCCGGAACCACCCA
GGCAAACGTCATTTCCTGGAGCGACACCAAGGTGGTTGCCACCAGCCCGGACTTTGCAACCAACGGCTACGTGACCGTAA
AAACCATCAACGGTCCGCTCTCCGGCAAAATCCTGGCGGCTCCGAAGAAAGTCAAACGGTAA

Upstream 100 bases:

>100_bases
ATGACATGCCGAAAGGAGGTGGCAAGGAGGAAGGAATACGTCAATCGCTTTGAATGTAATGTTTCATAATGGAGTCTTCA
CAAGAAAGGAGCAGAAAGGA

Downstream 100 bases:

>100_bases
TACCTTTCCGACCAACGGGGCAGGGGATTCGTTCCCCTGCCCTCCATCTCCTCCCCAGACATCATTTACATGCATTCGCG
ATGTGATTCACCATCGTCGA

Product: cytochrome C

Products: NA

Alternate protein names: Cytochrome C

Number of amino acids: Translated: 473; Mature: 473

Protein sequence:

>473_residues
MKKKVLIGASLAAVVLTGAAMVGAAVPPPPVNQFLGIYDTKFPNLTKADCLECHVSDTVLVQQHHALINTVTPPASCINT
SGTVPPTLATGCHVMVPDGSGGFTFQDFRNCFNCHTQTPHHTSPAAVAKDCKYCHGNFIDNPLDGHYIPTYSASSVTPMP
SGRSVTATDGNVVIVQGCEACHQAAPNAIDPKTNTVRPIFSNQDTHHGTGITDCNLCHNTSSNVPIRQCEVCHGVNSLHN
IQKDSPNAANLGTVKPGLEDLGWGHIGNNWDCQGCHWSWFGNSSPYTNATVPAINGQSSYTVTAGKEAVLTIVGSSFVNV
GPDGVTTYQPTVALVSGSTSLTLTPFSVTESEIKVSVPALVEGVYELRITKANKVSNLAKLTVAPARIIASATLATGKTL
TITGTGFGPAPSSEYDAGIGVYAGTTQANVISWSDTKVVATSPDFATNGYVTVKTINGPLSGKILAAPKKVKR

Sequences:

>Translated_473_residues
MKKKVLIGASLAAVVLTGAAMVGAAVPPPPVNQFLGIYDTKFPNLTKADCLECHVSDTVLVQQHHALINTVTPPASCINT
SGTVPPTLATGCHVMVPDGSGGFTFQDFRNCFNCHTQTPHHTSPAAVAKDCKYCHGNFIDNPLDGHYIPTYSASSVTPMP
SGRSVTATDGNVVIVQGCEACHQAAPNAIDPKTNTVRPIFSNQDTHHGTGITDCNLCHNTSSNVPIRQCEVCHGVNSLHN
IQKDSPNAANLGTVKPGLEDLGWGHIGNNWDCQGCHWSWFGNSSPYTNATVPAINGQSSYTVTAGKEAVLTIVGSSFVNV
GPDGVTTYQPTVALVSGSTSLTLTPFSVTESEIKVSVPALVEGVYELRITKANKVSNLAKLTVAPARIIASATLATGKTL
TITGTGFGPAPSSEYDAGIGVYAGTTQANVISWSDTKVVATSPDFATNGYVTVKTINGPLSGKILAAPKKVKR
>Mature_473_residues
MKKKVLIGASLAAVVLTGAAMVGAAVPPPPVNQFLGIYDTKFPNLTKADCLECHVSDTVLVQQHHALINTVTPPASCINT
SGTVPPTLATGCHVMVPDGSGGFTFQDFRNCFNCHTQTPHHTSPAAVAKDCKYCHGNFIDNPLDGHYIPTYSASSVTPMP
SGRSVTATDGNVVIVQGCEACHQAAPNAIDPKTNTVRPIFSNQDTHHGTGITDCNLCHNTSSNVPIRQCEVCHGVNSLHN
IQKDSPNAANLGTVKPGLEDLGWGHIGNNWDCQGCHWSWFGNSSPYTNATVPAINGQSSYTVTAGKEAVLTIVGSSFVNV
GPDGVTTYQPTVALVSGSTSLTLTPFSVTESEIKVSVPALVEGVYELRITKANKVSNLAKLTVAPARIIASATLATGKTL
TITGTGFGPAPSSEYDAGIGVYAGTTQANVISWSDTKVVATSPDFATNGYVTVKTINGPLSGKILAAPKKVKR

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 49379; Mature: 49379

Theoretical pI: Translated: 7.50; Mature: 7.50

Prosite motif: PS51008 MULTIHEME_CYTC

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

3.4 %Cys     (Translated Protein)
0.8 %Met     (Translated Protein)
4.2 %Cys+Met (Translated Protein)
3.4 %Cys     (Mature Protein)
0.8 %Met     (Mature Protein)
4.2 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MKKKVLIGASLAAVVLTGAAMVGAAVPPPPVNQFLGIYDTKFPNLTKADCLECHVSDTVL
CCCEEEECCHHHHHHHHHHHHHCCCCCCCCHHHHHCCCCCCCCCCCHHHHEEEECCCEEE
VQQHHALINTVTPPASCINTSGTVPPTLATGCHVMVPDGSGGFTFQDFRNCFNCHTQTPH
EEHHHHHEECCCCCHHHHCCCCCCCCHHHCCCEEEEECCCCCCCHHHHHHHHHCCCCCCC
HTSPAAVAKDCKYCHGNFIDNPLDGHYIPTYSASSVTPMPSGRSVTATDGNVVIVQGCEA
CCCCHHHHHHHHHHCCCCCCCCCCCCEECCCCCCCCCCCCCCCEEEECCCCEEEEECCHH
CHQAAPNAIDPKTNTVRPIFSNQDTHHGTGITDCNLCHNTSSNVPIRQCEVCHGVNSLHN
HHHCCCCCCCCCCCCCCEEECCCCCCCCCCCCCCCEECCCCCCCCHHHHHHHHHHHHHHH
IQKDSPNAANLGTVKPGLEDLGWGHIGNNWDCQGCHWSWFGNSSPYTNATVPAINGQSSY
HCCCCCCCCCCCCCCCCHHHCCCCCCCCCCCCCCCEEEECCCCCCCCCCEEEEECCCCCE
TVTAGKEAVLTIVGSSFVNVGPDGVTTYQPTVALVSGSTSLTLTPFSVTESEIKVSVPAL
EEECCCCEEEEEECCCCEECCCCCCEEECCEEEEEECCCEEEEEEEECCCCCEEEECHHH
VEGVYELRITKANKVSNLAKLTVAPARIIASATLATGKTLTITGTGFGPAPSSEYDAGIG
HCCEEEEEEECCHHHHHHHHEEECHHHHHHHHHCCCCCEEEEEECCCCCCCCCCCCCCEE
VYAGTTQANVISWSDTKVVATSPDFATNGYVTVKTINGPLSGKILAAPKKVKR
EEECCCCCEEEEECCCEEEEECCCCCCCCEEEEEEECCCCCCCEEECCHHHCC
>Mature Secondary Structure
MKKKVLIGASLAAVVLTGAAMVGAAVPPPPVNQFLGIYDTKFPNLTKADCLECHVSDTVL
CCCEEEECCHHHHHHHHHHHHHCCCCCCCCHHHHHCCCCCCCCCCCHHHHEEEECCCEEE
VQQHHALINTVTPPASCINTSGTVPPTLATGCHVMVPDGSGGFTFQDFRNCFNCHTQTPH
EEHHHHHEECCCCCHHHHCCCCCCCCHHHCCCEEEEECCCCCCCHHHHHHHHHCCCCCCC
HTSPAAVAKDCKYCHGNFIDNPLDGHYIPTYSASSVTPMPSGRSVTATDGNVVIVQGCEA
CCCCHHHHHHHHHHCCCCCCCCCCCCEECCCCCCCCCCCCCCCEEEECCCCEEEEECCHH
CHQAAPNAIDPKTNTVRPIFSNQDTHHGTGITDCNLCHNTSSNVPIRQCEVCHGVNSLHN
HHHCCCCCCCCCCCCCCEEECCCCCCCCCCCCCCCEECCCCCCCCHHHHHHHHHHHHHHH
IQKDSPNAANLGTVKPGLEDLGWGHIGNNWDCQGCHWSWFGNSSPYTNATVPAINGQSSY
HCCCCCCCCCCCCCCCCHHHCCCCCCCCCCCCCCCEEEECCCCCCCCCCEEEEECCCCCE
TVTAGKEAVLTIVGSSFVNVGPDGVTTYQPTVALVSGSTSLTLTPFSVTESEIKVSVPAL
EEECCCCEEEEEECCCCEECCCCCCEEECCEEEEEECCCEEEEEEEECCCCCEEEECHHH
VEGVYELRITKANKVSNLAKLTVAPARIIASATLATGKTLTITGTGFGPAPSSEYDAGIG
HCCEEEEEEECCHHHHHHHHEEECHHHHHHHHHCCCCCEEEEEECCCCCCCCCCCCCCEE
VYAGTTQANVISWSDTKVVATSPDFATNGYVTVKTINGPLSGKILAAPKKVKR
EEECCCCCEEEEECCCEEEEECCCCCCCCEEEEEEECCCCCCCEEECCHHHCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: NA