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The map label for this gene is 39997161

Identifier: 39997161

GI number: 39997161

Start: 2262514

End: 2263368

Strand: Reverse

Name: 39997161

Synonym: GSU2063

Alternate gene names: NA

Gene position: 2263368-2262514 (Counterclockwise)

Preceding gene: 39997162

Following gene: 39997160

Centisome position: 59.34

GC content: 61.75

Gene sequence:

>855_bases
GTGAACGATAAGCGGACCGAGATTTTCGAGATCATCCGTGACACGAGCACGCTCCCGACGCTTCCCGGCATCGTGACACG
GCTCCAGGCCCTGTCGGAAAACCGCAAGTCGACCATTCAGGAAATGGCGCAACTCGTCTCCTCTGACCAGATCCTGTCGG
CGCGGGTGCTGCGTCTGGTGAACTCCCCCTCCTACGGGTTCTACCGGGTTTCCACCATTTCCAACGCCCTGATCCTCCTG
GGCGTGAATGTCATCAAGAGTCTGGCGCTTAGCTCCTCCATCTTCGAAATCATGGAGAAGACCATCGTTGGGCTTTGGGA
GCACTCCCTCGGCGCCGGCGTGGCTGCGAACATCATTGCCCGCCGCCTGAAGCTCCCCGAGGTGGAGGAAATCTCCACGG
CAGCGCTTCTGCACGACATCGGCAAGGTGATCATCAAGGAGAAATGCCCCGAGGACTACGCCCGTGTCGCCATGCTCATG
GAGAGGAAGGGACTGGCCATGCTGGACGCGGAGCGGGAGCTGCTGGGAACCGATCACGCGGAGGTGGGGGAGTGGCTCGT
GCGGAGCTGGTACCTGCCGGACAAGCTGAGCGAGCCCGTGGCCTGTCACCACGACGTGGCACGCTCATCGACCCACCAGG
TCAAGACCGCCGTGGTCCATCTGGCCGATGTGCTCGTGAAGGCCAGCGGCTTCGGTTTCAGCGGCGACGAGTATGTCCCC
CAGATCCAGCCCGAGGCGTGGCAGAGGCTGGGCATGACCGAGGGCGACCTGGTTGCCATTGTGGAAGAGCTGGAGGACCG
GCTGATCGAAACGAAGAACTTCAGTCTGGAGATACAGGCCGTCGATGAGATCTGA

Upstream 100 bases:

>100_bases
GATCTGGACCGGCGTTTCAGCAAAGTGGAGGGGAATCCGCTCATGCAGCGGCTCAAGGAACTGTTCCAGGCGGGCATCGT
CCGCTCCGTGGAGGGTGGCG

Downstream 100 bases:

>100_bases
CCTGAGAATAGCCATCGTTGCCAATGAAAAGCGGGGGGACGGCAATATCGAGCTCCGCCTCCAGAGTAAAGGGTATCAGG
TGGTGACCCTGACGACCCCC

Product: HD domain-containing protein

Products: NA

Alternate protein names: Signal Transduction Protein; HD Domain-Containing Protein; Metal-Dependent Hydrolase HDOD; Histidine Kinase; HD Domain Protein; HDOD Domain Family; Response Regulator Receiver Protein; Diguanylate Cyclase; Metal-Dependent Phosphoesterase; HD Family Protein; HDIG Domain-Containing Protein; Response Regulator Receiver Modulated Diguanylate Cyclase; Sensor Histidine Kinase; Chemotaxis Signal Transduction Protein; Adenylate/Guanylate Cyclase; Metal-Dependent Phosphohydrolase; GGDEF Domain-Containing Protein; Phosphohydrolase; HDOD Domain Protein; Response Regulator; HD-GYP Domain-Containing Protein; Fusion Protein Comosed Of NSignal Transduction Protein; Hdod Domain Family; CheY-Like Response Regulator; Transmembrane GGDEF Family Signalling Protein; HDIG Domain Protein; Signal Transduction Family Protein; Hdod Domain Family Protein

Number of amino acids: Translated: 284; Mature: 284

Protein sequence:

>284_residues
MNDKRTEIFEIIRDTSTLPTLPGIVTRLQALSENRKSTIQEMAQLVSSDQILSARVLRLVNSPSYGFYRVSTISNALILL
GVNVIKSLALSSSIFEIMEKTIVGLWEHSLGAGVAANIIARRLKLPEVEEISTAALLHDIGKVIIKEKCPEDYARVAMLM
ERKGLAMLDAERELLGTDHAEVGEWLVRSWYLPDKLSEPVACHHDVARSSTHQVKTAVVHLADVLVKASGFGFSGDEYVP
QIQPEAWQRLGMTEGDLVAIVEELEDRLIETKNFSLEIQAVDEI

Sequences:

>Translated_284_residues
MNDKRTEIFEIIRDTSTLPTLPGIVTRLQALSENRKSTIQEMAQLVSSDQILSARVLRLVNSPSYGFYRVSTISNALILL
GVNVIKSLALSSSIFEIMEKTIVGLWEHSLGAGVAANIIARRLKLPEVEEISTAALLHDIGKVIIKEKCPEDYARVAMLM
ERKGLAMLDAERELLGTDHAEVGEWLVRSWYLPDKLSEPVACHHDVARSSTHQVKTAVVHLADVLVKASGFGFSGDEYVP
QIQPEAWQRLGMTEGDLVAIVEELEDRLIETKNFSLEIQAVDEI
>Mature_284_residues
MNDKRTEIFEIIRDTSTLPTLPGIVTRLQALSENRKSTIQEMAQLVSSDQILSARVLRLVNSPSYGFYRVSTISNALILL
GVNVIKSLALSSSIFEIMEKTIVGLWEHSLGAGVAANIIARRLKLPEVEEISTAALLHDIGKVIIKEKCPEDYARVAMLM
ERKGLAMLDAERELLGTDHAEVGEWLVRSWYLPDKLSEPVACHHDVARSSTHQVKTAVVHLADVLVKASGFGFSGDEYVP
QIQPEAWQRLGMTEGDLVAIVEELEDRLIETKNFSLEIQAVDEI

Specific function: Unknown

COG id: COG1639

COG function: function code T; Predicted signal transduction protein

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 31544; Mature: 31544

Theoretical pI: Translated: 4.88; Mature: 4.88

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.7 %Cys     (Translated Protein)
2.5 %Met     (Translated Protein)
3.2 %Cys+Met (Translated Protein)
0.7 %Cys     (Mature Protein)
2.5 %Met     (Mature Protein)
3.2 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MNDKRTEIFEIIRDTSTLPTLPGIVTRLQALSENRKSTIQEMAQLVSSDQILSARVLRLV
CCCHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHH
NSPSYGFYRVSTISNALILLGVNVIKSLALSSSIFEIMEKTIVGLWEHSLGAGVAANIIA
CCCCCCEEEHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHH
RRLKLPEVEEISTAALLHDIGKVIIKEKCPEDYARVAMLMERKGLAMLDAERELLGTDHA
HHHCCCCHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHCCCHHHHHHHHHHCCCHH
EVGEWLVRSWYLPDKLSEPVACHHDVARSSTHQVKTAVVHLADVLVKASGFGFSGDEYVP
HHHHHHHHHCCCCHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCC
QIQPEAWQRLGMTEGDLVAIVEELEDRLIETKNFSLEIQAVDEI
CCCHHHHHHCCCCCCHHHHHHHHHHHHHHHCCCCEEEEEEECCC
>Mature Secondary Structure
MNDKRTEIFEIIRDTSTLPTLPGIVTRLQALSENRKSTIQEMAQLVSSDQILSARVLRLV
CCCHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHH
NSPSYGFYRVSTISNALILLGVNVIKSLALSSSIFEIMEKTIVGLWEHSLGAGVAANIIA
CCCCCCEEEHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHH
RRLKLPEVEEISTAALLHDIGKVIIKEKCPEDYARVAMLMERKGLAMLDAERELLGTDHA
HHHCCCCHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHCCCHHHHHHHHHHCCCHH
EVGEWLVRSWYLPDKLSEPVACHHDVARSSTHQVKTAVVHLADVLVKASGFGFSGDEYVP
HHHHHHHHHCCCCHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCC
QIQPEAWQRLGMTEGDLVAIVEELEDRLIETKNFSLEIQAVDEI
CCCHHHHHHCCCCCCHHHHHHHHHHHHHHHCCCCEEEEEEECCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA