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The map label for this gene is yedQ [C]

Identifier: 39997160

GI number: 39997160

Start: 2261604

End: 2262524

Strand: Reverse

Name: yedQ [C]

Synonym: GSU2062

Alternate gene names: 39997160

Gene position: 2262524-2261604 (Counterclockwise)

Preceding gene: 39997161

Following gene: 39997159

Centisome position: 59.32

GC content: 58.74

Gene sequence:

>921_bases
ATGAGATCTGACCTGAGAATAGCCATCGTTGCCAATGAAAAGCGGGGGGACGGCAATATCGAGCTCCGCCTCCAGAGTAA
AGGGTATCAGGTGGTGACCCTGACGACCCCCTCCAGCGTCATGGGATTCATCTACTCGGATCCCCCCGACGTGATCCTCA
TGGATCTCTCCTCGCCCGACGAGGCGTTCCTGGGCATTATCAGGAGCCTCAAGGACGACTTTTTCTTCAGCACCATTCCG
GTCATCGGCATGATGCCGGAGCCGGCGGCAGAGTTTTTCGACTGGGATGAGTATCCCCTGGATGATTTCGTTACCTTCCC
CCTGAATTTCCGGGAGCTTTTTACCCGCATCGTTCTGTCGCTGCGGCGGCTGCGGCGGGTTTTCGACAACAATCCTCTCA
CCAGGCTGCCGGGCAACACCTCCATTCAGCGCGCCATCGAGCAGACGGTGGGCAAGCCCATGGCGGTCTGCTATGTGGAC
ATCAACCACTTCAAGCAGTATAACGATGTCTACGGTTTCGCCCACGGCGACGAGGTCCTGAGGATGCTCGGCCGCATCAT
GTCCAACGCCGTGAAGGACGCAGGCGACGGCTTCGCGGGACACATCGGCGGGGACGATTTCGTCTTTATCGTCCCCTTCG
ACCAGGCCGAGGTGGTTGCCGGGCGGATCATCGCCAATTTCACTGCCGTGGTTTCGGAACTCTTCAACGAGGAGGAAAAG
CGTAATGGCTTTTTCCTGGCCCACGACCGCAAGGGGAACGAGGAGAAGGTCCCCCTCATGGGGGTCGCCATCGCCATCGT
TCCCACGGACTCTCCCAAAATCGGCCACTACGCCAAGGTGGCCGAGGTGGCGGCAGAGCTCAAGACCCTTGCCAAGCAAT
CCCACAAGAGCTGCTTTGTCGTCGACCGACGTAAGTACTGA

Upstream 100 bases:

>100_bases
AGGCTGGGCATGACCGAGGGCGACCTGGTTGCCATTGTGGAAGAGCTGGAGGACCGGCTGATCGAAACGAAGAACTTCAG
TCTGGAGATACAGGCCGTCG

Downstream 100 bases:

>100_bases
TCCGTTTTCCATCTTCATTCCATCACGCAAGGAGATACCGCGCCATGCTCCGCAAGGCCCAGATTGCCGACGTCAAGGAT
ATACAGAAGCTTCTCACCCA

Product: GGDEF domain-containing protein

Products: NA

Alternate protein names: Response Regulator Receiver Modulated Diguanylate Cyclase; Diguanylate Cyclase; EAL/GGDEF Domain-Containing Protein; GGDEF Domain Protein; GGDEF Domain-Containing Protein; Cyclic Diguanylate Phosphodiesterase Domain Protein; Response Regulator Receiver Protein; Signal Transduction Protein; Signaling Protein; Two-Component Response Regulator; Response Regulator Receiver; Sensory Box/GGDEF Family Protein; EAL Domain-Containing Protein; GGDEF/EAL Sensory Box Protein; Histidine Kinase; Response Regulator/GGDEF Domain-Containing Protein; Two-Component System Response Regulator Receiver; Response Regulator; EAL Domain Protein; Sensor Protein; Sensory Box Histidine Kinase/Response Regulator; Diguanylate Cyclase/Phosphodiesterase Family Protein; Ggdef Domain Protein; EAL Domain Proteni; Signal Protein; EAL Domain/GGDEF Domain-Containing Protein; Diguanylate Cyclase Domain Protein; EAL Domain/GGDEF Domain Protein; CheY-Like Response Regulator Modulated Diguanylate Cyclase; Diguanylate Phosphodiesterase; GGDEFCBS:EAL Domain-Containing Protein; GGDEF Domain/HAMP Domain-Containing Protein; EAL Domain-Containing; Diguanylate Cyclase/Phosphodiesterase With Cbs Domains; Eal/Ggdef Domain Protein

Number of amino acids: Translated: 306; Mature: 306

Protein sequence:

>306_residues
MRSDLRIAIVANEKRGDGNIELRLQSKGYQVVTLTTPSSVMGFIYSDPPDVILMDLSSPDEAFLGIIRSLKDDFFFSTIP
VIGMMPEPAAEFFDWDEYPLDDFVTFPLNFRELFTRIVLSLRRLRRVFDNNPLTRLPGNTSIQRAIEQTVGKPMAVCYVD
INHFKQYNDVYGFAHGDEVLRMLGRIMSNAVKDAGDGFAGHIGGDDFVFIVPFDQAEVVAGRIIANFTAVVSELFNEEEK
RNGFFLAHDRKGNEEKVPLMGVAIAIVPTDSPKIGHYAKVAEVAAELKTLAKQSHKSCFVVDRRKY

Sequences:

>Translated_306_residues
MRSDLRIAIVANEKRGDGNIELRLQSKGYQVVTLTTPSSVMGFIYSDPPDVILMDLSSPDEAFLGIIRSLKDDFFFSTIP
VIGMMPEPAAEFFDWDEYPLDDFVTFPLNFRELFTRIVLSLRRLRRVFDNNPLTRLPGNTSIQRAIEQTVGKPMAVCYVD
INHFKQYNDVYGFAHGDEVLRMLGRIMSNAVKDAGDGFAGHIGGDDFVFIVPFDQAEVVAGRIIANFTAVVSELFNEEEK
RNGFFLAHDRKGNEEKVPLMGVAIAIVPTDSPKIGHYAKVAEVAAELKTLAKQSHKSCFVVDRRKY
>Mature_306_residues
MRSDLRIAIVANEKRGDGNIELRLQSKGYQVVTLTTPSSVMGFIYSDPPDVILMDLSSPDEAFLGIIRSLKDDFFFSTIP
VIGMMPEPAAEFFDWDEYPLDDFVTFPLNFRELFTRIVLSLRRLRRVFDNNPLTRLPGNTSIQRAIEQTVGKPMAVCYVD
INHFKQYNDVYGFAHGDEVLRMLGRIMSNAVKDAGDGFAGHIGGDDFVFIVPFDQAEVVAGRIIANFTAVVSELFNEEEK
RNGFFLAHDRKGNEEKVPLMGVAIAIVPTDSPKIGHYAKVAEVAAELKTLAKQSHKSCFVVDRRKY

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Integral membrane protein (Potential) [C]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 34366; Mature: 34366

Theoretical pI: Translated: 5.44; Mature: 5.44

Prosite motif: PS50110 RESPONSE_REGULATORY ; PS50887 GGDEF

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.7 %Cys     (Translated Protein)
2.9 %Met     (Translated Protein)
3.6 %Cys+Met (Translated Protein)
0.7 %Cys     (Mature Protein)
2.9 %Met     (Mature Protein)
3.6 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MRSDLRIAIVANEKRGDGNIELRLQSKGYQVVTLTTPSSVMGFIYSDPPDVILMDLSSPD
CCCCEEEEEEEECCCCCCCEEEEEECCCEEEEEEECCHHHEEEEECCCCCEEEEECCCCH
EAFLGIIRSLKDDFFFSTIPVIGMMPEPAAEFFDWDEYPLDDFVTFPLNFRELFTRIVLS
HHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHCCCCCCCCCCEEECCCCHHHHHHHHHHH
LRRLRRVFDNNPLTRLPGNTSIQRAIEQTVGKPMAVCYVDINHFKQYNDVYGFAHGDEVL
HHHHHHHHCCCCCEECCCCHHHHHHHHHHHCCCEEEEEEEHHHHHHHHHHCCCCCHHHHH
RMLGRIMSNAVKDAGDGFAGHIGGDDFVFIVPFDQAEVVAGRIIANFTAVVSELFNEEEK
HHHHHHHHHHHHHCCCCCEECCCCCCEEEEEECCCHHHHHHHHHHHHHHHHHHHHCHHHH
RNGFFLAHDRKGNEEKVPLMGVAIAIVPTDSPKIGHYAKVAEVAAELKTLAKQSHKSCFV
CCCEEEEECCCCCCCCCCEEEEEEEEEECCCCCCCHHHHHHHHHHHHHHHHHHCCCCEEE
VDRRKY
EECCCC
>Mature Secondary Structure
MRSDLRIAIVANEKRGDGNIELRLQSKGYQVVTLTTPSSVMGFIYSDPPDVILMDLSSPD
CCCCEEEEEEEECCCCCCCEEEEEECCCEEEEEEECCHHHEEEEECCCCCEEEEECCCCH
EAFLGIIRSLKDDFFFSTIPVIGMMPEPAAEFFDWDEYPLDDFVTFPLNFRELFTRIVLS
HHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHCCCCCCCCCCEEECCCCHHHHHHHHHHH
LRRLRRVFDNNPLTRLPGNTSIQRAIEQTVGKPMAVCYVDINHFKQYNDVYGFAHGDEVL
HHHHHHHHCCCCCEECCCCHHHHHHHHHHHCCCEEEEEEEHHHHHHHHHHCCCCCHHHHH
RMLGRIMSNAVKDAGDGFAGHIGGDDFVFIVPFDQAEVVAGRIIANFTAVVSELFNEEEK
HHHHHHHHHHHHHCCCCCEECCCCCCEEEEEECCCHHHHHHHHHHHHHHHHHHHHCHHHH
RNGFFLAHDRKGNEEKVPLMGVAIAIVPTDSPKIGHYAKVAEVAAELKTLAKQSHKSCFV
CCCEEEEECCCCCCCCCCEEEEEEEEEECCCCCCCHHHHHHHHHHHHHHHHHHCCCCEEE
VDRRKY
EECCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 7.0

TargetDB status: NA

Availability: NA

References: NA