Definition Geobacter sulfurreducens PCA chromosome, complete genome.
Accession NC_002939
Length 3,814,139

Click here to switch to the map view.

The map label for this gene is 39997101

Identifier: 39997101

GI number: 39997101

Start: 2195781

End: 2196227

Strand: Reverse

Name: 39997101

Synonym: GSU2003

Alternate gene names: NA

Gene position: 2196227-2195781 (Counterclockwise)

Preceding gene: 39997102

Following gene: 39997100

Centisome position: 57.58

GC content: 58.17

Gene sequence:

>447_bases
ATGGCGATTCTCTTTCTTCTGCTGGGTCCATGGCGCTCGATGGCCTTCACTGCCCACCAAGTGACGACCGACGCGCGAAT
CGCGTTTGAGCAGATTCTCGACTTGTGGCGGGCGGAGGATCTGGAACGGCTGTACGAGCGCCTCGATCATCCGGCGGCAT
GGGGATGGGACTACTTTGCCGAGCGCATGGTCTACGCTTCCCGGGTCCCGGCTTGCTGCTGGGAAAAGCTTCAGGATGTA
TCCGTAGCGGCCCGTGATGCCGACTATGTGGTCATCAATGCCAAGGTCGGCTTCGAGGTGGAAGGGGTAGGGACCAGGTT
CGTTACCCGCGATTTCCACCTGCGACGGATCGACGGTATCTGGAAGCTCCCCATGAATGATGTCCTCACCCTCTCCAAAT
ACAATTTCCAGCGCATACCCAGGAAAATTTACCAGCGGACACCCTGA

Upstream 100 bases:

>100_bases
GATGAGCTTGGTGCTCCCGGAGGTCCGTTGCACGGCATCATCTGAGCAGCGTTCGATGGCTGTTCATGGCGGGAGGTGTT
TCGTGGCGCGATACCTCTGT

Downstream 100 bases:

>100_bases
GCCGCTGTCTGAACAGCCGGAAACGCATCCGGGCGGACGGAGACGGTTGCTGACGGAAGCCGTCCCTTGACGCCCAATTC
AGTCGATTGACGCAGCGGCC

Product: hypothetical protein

Products: NA

Alternate protein names: None

Number of amino acids: Translated: 148; Mature: 147

Protein sequence:

>148_residues
MAILFLLLGPWRSMAFTAHQVTTDARIAFEQILDLWRAEDLERLYERLDHPAAWGWDYFAERMVYASRVPACCWEKLQDV
SVAARDADYVVINAKVGFEVEGVGTRFVTRDFHLRRIDGIWKLPMNDVLTLSKYNFQRIPRKIYQRTP

Sequences:

>Translated_148_residues
MAILFLLLGPWRSMAFTAHQVTTDARIAFEQILDLWRAEDLERLYERLDHPAAWGWDYFAERMVYASRVPACCWEKLQDV
SVAARDADYVVINAKVGFEVEGVGTRFVTRDFHLRRIDGIWKLPMNDVLTLSKYNFQRIPRKIYQRTP
>Mature_147_residues
AILFLLLGPWRSMAFTAHQVTTDARIAFEQILDLWRAEDLERLYERLDHPAAWGWDYFAERMVYASRVPACCWEKLQDVS
VAARDADYVVINAKVGFEVEGVGTRFVTRDFHLRRIDGIWKLPMNDVLTLSKYNFQRIPRKIYQRTP

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 17426; Mature: 17295

Theoretical pI: Translated: 8.21; Mature: 8.21

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.4 %Cys     (Translated Protein)
2.7 %Met     (Translated Protein)
4.1 %Cys+Met (Translated Protein)
1.4 %Cys     (Mature Protein)
2.0 %Met     (Mature Protein)
3.4 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MAILFLLLGPWRSMAFTAHQVTTDARIAFEQILDLWRAEDLERLYERLDHPAAWGWDYFA
CEEEEEECCCCHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHH
ERMVYASRVPACCWEKLQDVSVAARDADYVVINAKVGFEVEGVGTRFVTRDFHLRRIDGI
HHHHHHHCCCHHHHHHHHHHHHEECCCCEEEEEEEECEEEECCCCEEEECCCHHHHHCCE
WKLPMNDVLTLSKYNFQRIPRKIYQRTP
EECCCCHHEEHHHHHHHHHHHHHHCCCC
>Mature Secondary Structure 
AILFLLLGPWRSMAFTAHQVTTDARIAFEQILDLWRAEDLERLYERLDHPAAWGWDYFA
EEEEEECCCCHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHH
ERMVYASRVPACCWEKLQDVSVAARDADYVVINAKVGFEVEGVGTRFVTRDFHLRRIDGI
HHHHHHHCCCHHHHHHHHHHHHEECCCCEEEEEEEECEEEECCCCEEEECCCHHHHHCCE
WKLPMNDVLTLSKYNFQRIPRKIYQRTP
EECCCCHHEEHHHHHHHHHHHHHHCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA