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The map label for this gene is 39997079

Identifier: 39997079

GI number: 39997079

Start: 2171409

End: 2172638

Strand: Reverse

Name: 39997079

Synonym: GSU1981

Alternate gene names: NA

Gene position: 2172638-2171409 (Counterclockwise)

Preceding gene: 39997080

Following gene: 39997078

Centisome position: 56.96

GC content: 58.05

Gene sequence:

>1230_bases
ATGAAACAGGCAGCCCCGCTTCTCATCTGCTGTGCATGCGCCGCGCTCGTTCCGTTTCCAGCCAATGCCGCTGATTTCCG
GTTTACCCCCAACATAACCGTGAGCGAGGAGTTCACCGACAACGTCTTCGAGACGGCCGAGGGGAAGCGCTACGACTTCA
TTACCCGCCTGCTTCCGGGCCTTTCACTTGATTATAAGGCCCCAGTTCTGGACCTCTCCGTGGCGTACAATTACGACTAC
CGCTACTATGCACGCAACAGCCGCAGCGACGACACCACCCACAACCTTGACGCCCGTGGCCTGGCGCGAATTGTCGACGA
GTTCCTCTTTCTGGAAGCCAGCGATACCTACAAACGTGTCTCCCTCGACGTTTCCCGCGATACCAGCAACGAAAGCCTGT
TCCGCAACCAGTCGGACCAGAACATCGTCACCGCTTCGCCCTATTTCGTCATCAGCACCATCCCCCACTACACCATTAAG
GGTGGGTATCGCTACACCAATACCTGGTACAAGGATCCATCCGGCATCGACAAGACCGAGCACCGCGCCTTTGCCGACCT
CAGCTATGAGGTGACCAAGCAGCTTTCCCTGACCGGCACGTATTCCTACGTGATCGAGGACACTGCGGAATCGGACCTGA
ACCGCCACGAGGCCATGGCGGGCGGACGCTATGAGTACGCCGACAAGAGCTTCGTCTTTGCCAATGGCGGTGCTTCCCGC
ATTTCCTACCGGGGAGGGGACACCTTCACCAATCCCATCTGGAATGCCGGGCTTACTCATGCCTTCGATTCCTTCACCGT
TACGCTGTCCACCGGCGTCCAGTACAGCGAAGACCCCCTGCGCGCCTCCACGGAGGAGACCTTTTACTCGGCCGTATTCG
ATATGCCCCTGAAGCGTGGGGCGCTGAACCTGAACGCTTCCTACTCTGACTTCGTCAATACCGCAACCGATGAGCGGGAA
ACCAGACGGTACGGCGGTGGATTCACCCTGCACCATGAGCTCACTCAACGTCTTACCGGCACCCTCGGCTTTGCCGCCGA
ACGTTACGAACAGAACCTGCTGGATGCCTATACCCGCAAATTCTTCGTGGATGCCGGCCTTCGCTACGAACTGGGCGAAG
GGTTTTCCCTGGGGCTTACCTACCGCTACATCGATTACCACTCCCCCCGGATCGTAGCAGACAACTACACCGTAAACCGG
GCGATGGTGGAGATCAGGAAGGTCTTCTAG

Upstream 100 bases:

>100_bases
TGCCAGCCGCAGGACTCTCCCAAAGGGCTGCTGAAGAGGATGTTCGGTGCCTGACGGTGCCTTGTGCAATGCTATGAATA
GTACCTCAAGGGAGAGAACC

Downstream 100 bases:

>100_bases
TGCGTAACGCGCTCTCTATAGATGTGGAGGATTACTTCCAGGTAAGCGCCTTTGAAGGGTGCTCTCCTCCGGAACAGTGG
GACTGTTTTCCCCTTCGGGT

Product: hypothetical protein

Products: NA

Alternate protein names: Lipoprotein

Number of amino acids: Translated: 409; Mature: 409

Protein sequence:

>409_residues
MKQAAPLLICCACAALVPFPANAADFRFTPNITVSEEFTDNVFETAEGKRYDFITRLLPGLSLDYKAPVLDLSVAYNYDY
RYYARNSRSDDTTHNLDARGLARIVDEFLFLEASDTYKRVSLDVSRDTSNESLFRNQSDQNIVTASPYFVISTIPHYTIK
GGYRYTNTWYKDPSGIDKTEHRAFADLSYEVTKQLSLTGTYSYVIEDTAESDLNRHEAMAGGRYEYADKSFVFANGGASR
ISYRGGDTFTNPIWNAGLTHAFDSFTVTLSTGVQYSEDPLRASTEETFYSAVFDMPLKRGALNLNASYSDFVNTATDERE
TRRYGGGFTLHHELTQRLTGTLGFAAERYEQNLLDAYTRKFFVDAGLRYELGEGFSLGLTYRYIDYHSPRIVADNYTVNR
AMVEIRKVF

Sequences:

>Translated_409_residues
MKQAAPLLICCACAALVPFPANAADFRFTPNITVSEEFTDNVFETAEGKRYDFITRLLPGLSLDYKAPVLDLSVAYNYDY
RYYARNSRSDDTTHNLDARGLARIVDEFLFLEASDTYKRVSLDVSRDTSNESLFRNQSDQNIVTASPYFVISTIPHYTIK
GGYRYTNTWYKDPSGIDKTEHRAFADLSYEVTKQLSLTGTYSYVIEDTAESDLNRHEAMAGGRYEYADKSFVFANGGASR
ISYRGGDTFTNPIWNAGLTHAFDSFTVTLSTGVQYSEDPLRASTEETFYSAVFDMPLKRGALNLNASYSDFVNTATDERE
TRRYGGGFTLHHELTQRLTGTLGFAAERYEQNLLDAYTRKFFVDAGLRYELGEGFSLGLTYRYIDYHSPRIVADNYTVNR
AMVEIRKVF
>Mature_409_residues
MKQAAPLLICCACAALVPFPANAADFRFTPNITVSEEFTDNVFETAEGKRYDFITRLLPGLSLDYKAPVLDLSVAYNYDY
RYYARNSRSDDTTHNLDARGLARIVDEFLFLEASDTYKRVSLDVSRDTSNESLFRNQSDQNIVTASPYFVISTIPHYTIK
GGYRYTNTWYKDPSGIDKTEHRAFADLSYEVTKQLSLTGTYSYVIEDTAESDLNRHEAMAGGRYEYADKSFVFANGGASR
ISYRGGDTFTNPIWNAGLTHAFDSFTVTLSTGVQYSEDPLRASTEETFYSAVFDMPLKRGALNLNASYSDFVNTATDERE
TRRYGGGFTLHHELTQRLTGTLGFAAERYEQNLLDAYTRKFFVDAGLRYELGEGFSLGLTYRYIDYHSPRIVADNYTVNR
AMVEIRKVF

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 46362; Mature: 46362

Theoretical pI: Translated: 5.07; Mature: 5.07

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.7 %Cys     (Translated Protein)
1.0 %Met     (Translated Protein)
1.7 %Cys+Met (Translated Protein)
0.7 %Cys     (Mature Protein)
1.0 %Met     (Mature Protein)
1.7 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MKQAAPLLICCACAALVPFPANAADFRFTPNITVSEEFTDNVFETAEGKRYDFITRLLPG
CCCCCHHHHHHHHHHHCCCCCCCCCEEECCCEEECHHHHHHHHHHCCCCHHHHHHHHHCC
LSLDYKAPVLDLSVAYNYDYRYYARNSRSDDTTHNLDARGLARIVDEFLFLEASDTYKRV
CCCCCCCCEEEEEEEEECCEEEEECCCCCCCCCCCCCHHHHHHHHHHHHEEECCCCEEEE
SLDVSRDTSNESLFRNQSDQNIVTASPYFVISTIPHYTIKGGYRYTNTWYKDPSGIDKTE
EEEECCCCCCHHHHCCCCCCCEEEECCEEEEECCCCEEEECCEEECCCEECCCCCCCHHH
HRAFADLSYEVTKQLSLTGTYSYVIEDTAESDLNRHEAMAGGRYEYADKSFVFANGGASR
HHHHHHCCHHHHHEEEEEEEEEEEEECCHHHHHHHHHHHCCCCEEECCCEEEEECCCCCE
ISYRGGDTFTNPIWNAGLTHAFDSFTVTLSTGVQYSEDPLRASTEETFYSAVFDMPLKRG
EEECCCCCCCCCCCCCCHHHCCCCEEEEEECCCEECCCCCCCCHHHHHHHHHHHCCHHCC
ALNLNASYSDFVNTATDERETRRYGGGFTLHHELTQRLTGTLGFAAERYEQNLLDAYTRK
EEECCCCHHHHHHCCCCHHHHHHHCCCEEEHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
FFVDAGLRYELGEGFSLGLTYRYIDYHSPRIVADNYTVNRAMVEIRKVF
HHCCCCCEEECCCCEEEEEEEEEEEECCCEEEECCCCHHHHHHHHHHCC
>Mature Secondary Structure
MKQAAPLLICCACAALVPFPANAADFRFTPNITVSEEFTDNVFETAEGKRYDFITRLLPG
CCCCCHHHHHHHHHHHCCCCCCCCCEEECCCEEECHHHHHHHHHHCCCCHHHHHHHHHCC
LSLDYKAPVLDLSVAYNYDYRYYARNSRSDDTTHNLDARGLARIVDEFLFLEASDTYKRV
CCCCCCCCEEEEEEEEECCEEEEECCCCCCCCCCCCCHHHHHHHHHHHHEEECCCCEEEE
SLDVSRDTSNESLFRNQSDQNIVTASPYFVISTIPHYTIKGGYRYTNTWYKDPSGIDKTE
EEEECCCCCCHHHHCCCCCCCEEEECCEEEEECCCCEEEECCEEECCCEECCCCCCCHHH
HRAFADLSYEVTKQLSLTGTYSYVIEDTAESDLNRHEAMAGGRYEYADKSFVFANGGASR
HHHHHHCCHHHHHEEEEEEEEEEEEECCHHHHHHHHHHHCCCCEEECCCEEEEECCCCCE
ISYRGGDTFTNPIWNAGLTHAFDSFTVTLSTGVQYSEDPLRASTEETFYSAVFDMPLKRG
EEECCCCCCCCCCCCCCHHHCCCCEEEEEECCCEECCCCCCCCHHHHHHHHHHHCCHHCC
ALNLNASYSDFVNTATDERETRRYGGGFTLHHELTQRLTGTLGFAAERYEQNLLDAYTRK
EEECCCCHHHHHHCCCCHHHHHHHCCCEEEHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
FFVDAGLRYELGEGFSLGLTYRYIDYHSPRIVADNYTVNRAMVEIRKVF
HHCCCCCEEECCCCEEEEEEEEEEEECCCEEEECCCCHHHHHHHHHHCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: NA