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The map label for this gene is 39997078

Identifier: 39997078

GI number: 39997078

Start: 2170504

End: 2171385

Strand: Reverse

Name: 39997078

Synonym: GSU1980

Alternate gene names: NA

Gene position: 2171385-2170504 (Counterclockwise)

Preceding gene: 39997079

Following gene: 39997077

Centisome position: 56.93

GC content: 61.11

Gene sequence:

>882_bases
GTGGAGGATTACTTCCAGGTAAGCGCCTTTGAAGGGTGCTCTCCTCCGGAACAGTGGGACTGTTTTCCCCTTCGGGTGGA
GAAGAATACGTCCCGTATCCTCGACATGCTCGATGCCGGGGGCGTTAAGGCCACGTTCTTCGTCCTCGGCTGGGTGGCGG
AACGCGCGCCGGAACTGGTAAAAGAGATAGCACGACGGGGCCACGAGGTTGCCAGCCACGGCTATGGTCACCGCCGGGTT
TCTACCCAGACCAGGCAGGAATTCCGGGCCGACATCCGCAGAAGCAAGGCGCTGATCGAGAATCTTACCGGCAGTCCCGT
CCACGGCTATCGCGCGCCCAGCTATTCGATCTCACGAAAAGTCCTCTGGGCCTTCGACGAACTGCTCGACGCCGGTTACT
GTTACGACTCCAGCGTCTTTCCCGTCCGCCATGACCTCTACGGCATCCCTGACTGGCCGAGCCACCCCTTTCGGGTCGTG
AAGGGGAACGGTGGGTGGGAGCCGTCCGCAACTGCCCCTGACAGCGAAGACGGCATCACCGGCCAGATGCCGTCCATCCT
TGAAATGCCGATAACCACCCTTACCCTCGGGGGCAGGAACATTCCCATTGCCGGGGGCGGCTATTTCCGCTTTTTCCCCT
ATGCCTTCACCCGGTGGGGACTGCGGCGCATCAACCGGCGTGAGAAACGGTCGTTCATCTTCTATCTCCATCCCTGGGAG
ATGGACCCCGACCAGCCCAGAATGGCCGGTGCTCCGGCCAAGAGCCGCTTTCGGCATTACCTGAACCTGCACCGGACCGA
AGAGCGGTTCCGCCGACTGTTGGGAGAATTTCGCTTCACCCCCGTGATGGACCTTCTGGCCGTAGGGATGGTTGAACCAT
GA

Upstream 100 bases:

>100_bases
ATTACCACTCCCCCCGGATCGTAGCAGACAACTACACCGTAAACCGGGCGATGGTGGAGATCAGGAAGGTCTTCTAGTGC
GTAACGCGCTCTCTATAGAT

Downstream 100 bases:

>100_bases
ATACGAACGAGATGACCACGAACGGGAACATATCCATGGGTGGTAAAAGCGCCGGGGCCAGGCTCGGACTGCTTGCCCTG
TTCTGCTGCGCCTTTGTGGC

Product: polysaccharide deacetylase domain-containing protein

Products: NA

Alternate protein names: Xylanase/Chitin Deacetylase; Polysaccharide Deacetylase Family Protein; Polysaccharide Deacetylase Domain-Containing Protein; PEP-CTERM Locus Polysaccharide Deactylase; Polysaccharide Deactylase Domain-Containing Protein; Acetylxylan Esterase; Polysaccharide Deacetylase N-Terminal Fragment; Polysaccharide Deacetylase Domain Protein; Polysaccharide Deacetylase Pda4C; Peptidoglycan N-Acetylglucosamine Deacetylase A; Chitooligosaccharide Deacetylase

Number of amino acids: Translated: 293; Mature: 293

Protein sequence:

>293_residues
MEDYFQVSAFEGCSPPEQWDCFPLRVEKNTSRILDMLDAGGVKATFFVLGWVAERAPELVKEIARRGHEVASHGYGHRRV
STQTRQEFRADIRRSKALIENLTGSPVHGYRAPSYSISRKVLWAFDELLDAGYCYDSSVFPVRHDLYGIPDWPSHPFRVV
KGNGGWEPSATAPDSEDGITGQMPSILEMPITTLTLGGRNIPIAGGGYFRFFPYAFTRWGLRRINRREKRSFIFYLHPWE
MDPDQPRMAGAPAKSRFRHYLNLHRTEERFRRLLGEFRFTPVMDLLAVGMVEP

Sequences:

>Translated_293_residues
MEDYFQVSAFEGCSPPEQWDCFPLRVEKNTSRILDMLDAGGVKATFFVLGWVAERAPELVKEIARRGHEVASHGYGHRRV
STQTRQEFRADIRRSKALIENLTGSPVHGYRAPSYSISRKVLWAFDELLDAGYCYDSSVFPVRHDLYGIPDWPSHPFRVV
KGNGGWEPSATAPDSEDGITGQMPSILEMPITTLTLGGRNIPIAGGGYFRFFPYAFTRWGLRRINRREKRSFIFYLHPWE
MDPDQPRMAGAPAKSRFRHYLNLHRTEERFRRLLGEFRFTPVMDLLAVGMVEP
>Mature_293_residues
MEDYFQVSAFEGCSPPEQWDCFPLRVEKNTSRILDMLDAGGVKATFFVLGWVAERAPELVKEIARRGHEVASHGYGHRRV
STQTRQEFRADIRRSKALIENLTGSPVHGYRAPSYSISRKVLWAFDELLDAGYCYDSSVFPVRHDLYGIPDWPSHPFRVV
KGNGGWEPSATAPDSEDGITGQMPSILEMPITTLTLGGRNIPIAGGGYFRFFPYAFTRWGLRRINRREKRSFIFYLHPWE
MDPDQPRMAGAPAKSRFRHYLNLHRTEERFRRLLGEFRFTPVMDLLAVGMVEP

Specific function: Unknown

COG id: COG0726

COG function: function code G; Predicted xylanase/chitin deacetylase

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 33648; Mature: 33648

Theoretical pI: Translated: 9.02; Mature: 9.02

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.0 %Cys     (Translated Protein)
2.7 %Met     (Translated Protein)
3.8 %Cys+Met (Translated Protein)
1.0 %Cys     (Mature Protein)
2.7 %Met     (Mature Protein)
3.8 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MEDYFQVSAFEGCSPPEQWDCFPLRVEKNTSRILDMLDAGGVKATFFVLGWVAERAPELV
CCCCEEEECCCCCCCCCCCCCEEEEECCCHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHH
KEIARRGHEVASHGYGHRRVSTQTRQEFRADIRRSKALIENLTGSPVHGYRAPSYSISRK
HHHHHCCHHHHHCCCCCCCCCHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCHHHHHH
VLWAFDELLDAGYCYDSSVFPVRHDLYGIPDWPSHPFRVVKGNGGWEPSATAPDSEDGIT
HHHHHHHHHHCCCCCCCCCCCHHHHCCCCCCCCCCCEEEEECCCCCCCCCCCCCCCCCCC
GQMPSILEMPITTLTLGGRNIPIAGGGYFRFFPYAFTRWGLRRINRREKRSFIFYLHPWE
CCCCHHHHCCCEEEEECCCCCCEECCCHHHHHHHHHHHHHHHHHHHHHCCCEEEEEECCC
MDPDQPRMAGAPAKSRFRHYLNLHRTEERFRRLLGEFRFTPVMDLLAVGMVEP
CCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHCCCCC
>Mature Secondary Structure
MEDYFQVSAFEGCSPPEQWDCFPLRVEKNTSRILDMLDAGGVKATFFVLGWVAERAPELV
CCCCEEEECCCCCCCCCCCCCEEEEECCCHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHH
KEIARRGHEVASHGYGHRRVSTQTRQEFRADIRRSKALIENLTGSPVHGYRAPSYSISRK
HHHHHCCHHHHHCCCCCCCCCHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCHHHHHH
VLWAFDELLDAGYCYDSSVFPVRHDLYGIPDWPSHPFRVVKGNGGWEPSATAPDSEDGIT
HHHHHHHHHHCCCCCCCCCCCHHHHCCCCCCCCCCCEEEEECCCCCCCCCCCCCCCCCCC
GQMPSILEMPITTLTLGGRNIPIAGGGYFRFFPYAFTRWGLRRINRREKRSFIFYLHPWE
CCCCHHHHCCCEEEEECCCCCCEECCCHHHHHHHHHHHHHHHHHHHHHCCCEEEEEECCC
MDPDQPRMAGAPAKSRFRHYLNLHRTEERFRRLLGEFRFTPVMDLLAVGMVEP
CCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA