| Definition | Geobacter sulfurreducens PCA chromosome, complete genome. |
|---|---|
| Accession | NC_002939 |
| Length | 3,814,139 |
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The map label for this gene is 39997065
Identifier: 39997065
GI number: 39997065
Start: 2157132
End: 2158214
Strand: Reverse
Name: 39997065
Synonym: GSU1967
Alternate gene names: NA
Gene position: 2158214-2157132 (Counterclockwise)
Preceding gene: 39997066
Following gene: 39997064
Centisome position: 56.58
GC content: 57.8
Gene sequence:
>1083_bases ATGGAGCGAGACCGGAGAATTGATACCATTCGCGGCCTGCTGGTGGCGATCATGATCATCGACCACGTGGGGGGCTACCT GAAGCTGGCCACGGCACAGACCTTGGGGTATGTCTCGGCTGCGGAAGGGTTCGTCTTCCTGTCGGGGTTCGTCTGCGCCA AGGTTTATGGCCGATACCTGGACAACACCAGGCAGTTGTTGACAAAGACCTTCAGGAGAAGCTTCCTCATCTACCGGTAC CACATTGCCGTGGCGCTGCTGCTGCCCCTGCTGGCGCTGCTGATTCCTCCGTACCAACGGTCGTGGATGGAACTTCTGCA CCCCTACGATGTGGCCCCGCTGAAAACGGTCCTGCTCGATCTGGTGCTCCTCCACCAGGGTGATTATCTCGATATCCTGC CGCTCTATGCCTGGTTGCTGCTGTTGTGCCCCGCGCTGCTTCTTCTGGTGCGCCGGGTGGGAGCGGTTCCGGTACTGGCC GTCAGTTTCGGTTTCTGGGTTGCCGGCCAGTTTGTCGATCCGATGCAGCTCATTGCCAGTTCCTTTGGCGCCCAGTATGG TACCGGCTTCTTCAACCTGATCTCATGGCAGTTTCTGTTTACCCTCGGTCTCTGTCTCGGCATATCCGGCCAATGGCTGG ACAGGCTGTGCGCCAATAAGATGATGCTGGCTACCGTTGCAGTGTGCTGCCTTGTATTTTTTGCCTTCAGGCATTCCGAT CTGGCGGTCAATCACTCGCTATTGGTCGACAGGAGCAAGCTGCCGATACATCGCCTGCTGAACTTCTGTTTTCTCATGGT GCTGCTCCGCCAGATGCTCCAGAACGTGCCCCGCGATTTCTTCGTGCCGTATGTCGAATATATCGGTCGGCATTCGCTGC AGATATTTTCCCTGCACGTGCTGGTCATTTATCTGTTCAGACCCGTGGCCTGGCGGATGGATTCCATGTTCGGCGAGGCA GGGCTCACCGCCCTGTCCCTCGTGATCTTCGCCCTGAGTACCCTTCCGGTCTATGTGTATAACCGGTACCGGCAAACGTC CTCCCTTCTGTTCCGGCAGGGGCTGGACAGCGGTCTGCGCTGA
Upstream 100 bases:
>100_bases GACTACCAGAAGGCCCAGGAAGATGTGCGGAGCGGAAAGATACAGTGATGTGCGCCGACAACCATCCGTTGCCGGGCGGC ATGGCGGGAGCCTGCTGACC
Downstream 100 bases:
>100_bases GACGGCGCAGACCAAAACGTTGATGACGGATTGAACTGTATGCCGATTGATATCACTTCCTTTGATTTCACTGCCTGCGG CGAGGAGATGTACCGGCTCT
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 360; Mature: 360
Protein sequence:
>360_residues MERDRRIDTIRGLLVAIMIIDHVGGYLKLATAQTLGYVSAAEGFVFLSGFVCAKVYGRYLDNTRQLLTKTFRRSFLIYRY HIAVALLLPLLALLIPPYQRSWMELLHPYDVAPLKTVLLDLVLLHQGDYLDILPLYAWLLLLCPALLLLVRRVGAVPVLA VSFGFWVAGQFVDPMQLIASSFGAQYGTGFFNLISWQFLFTLGLCLGISGQWLDRLCANKMMLATVAVCCLVFFAFRHSD LAVNHSLLVDRSKLPIHRLLNFCFLMVLLRQMLQNVPRDFFVPYVEYIGRHSLQIFSLHVLVIYLFRPVAWRMDSMFGEA GLTALSLVIFALSTLPVYVYNRYRQTSSLLFRQGLDSGLR
Sequences:
>Translated_360_residues MERDRRIDTIRGLLVAIMIIDHVGGYLKLATAQTLGYVSAAEGFVFLSGFVCAKVYGRYLDNTRQLLTKTFRRSFLIYRY HIAVALLLPLLALLIPPYQRSWMELLHPYDVAPLKTVLLDLVLLHQGDYLDILPLYAWLLLLCPALLLLVRRVGAVPVLA VSFGFWVAGQFVDPMQLIASSFGAQYGTGFFNLISWQFLFTLGLCLGISGQWLDRLCANKMMLATVAVCCLVFFAFRHSD LAVNHSLLVDRSKLPIHRLLNFCFLMVLLRQMLQNVPRDFFVPYVEYIGRHSLQIFSLHVLVIYLFRPVAWRMDSMFGEA GLTALSLVIFALSTLPVYVYNRYRQTSSLLFRQGLDSGLR >Mature_360_residues MERDRRIDTIRGLLVAIMIIDHVGGYLKLATAQTLGYVSAAEGFVFLSGFVCAKVYGRYLDNTRQLLTKTFRRSFLIYRY HIAVALLLPLLALLIPPYQRSWMELLHPYDVAPLKTVLLDLVLLHQGDYLDILPLYAWLLLLCPALLLLVRRVGAVPVLA VSFGFWVAGQFVDPMQLIASSFGAQYGTGFFNLISWQFLFTLGLCLGISGQWLDRLCANKMMLATVAVCCLVFFAFRHSD LAVNHSLLVDRSKLPIHRLLNFCFLMVLLRQMLQNVPRDFFVPYVEYIGRHSLQIFSLHVLVIYLFRPVAWRMDSMFGEA GLTALSLVIFALSTLPVYVYNRYRQTSSLLFRQGLDSGLR
Specific function: Unknown
COG id: COG4645
COG function: function code S; Uncharacterized protein conserved in bacteria
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 41032; Mature: 41032
Theoretical pI: Translated: 9.50; Mature: 9.50
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.9 %Cys (Translated Protein) 2.8 %Met (Translated Protein) 4.7 %Cys+Met (Translated Protein) 1.9 %Cys (Mature Protein) 2.8 %Met (Mature Protein) 4.7 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MERDRRIDTIRGLLVAIMIIDHVGGYLKLATAQTLGYVSAAEGFVFLSGFVCAKVYGRYL CCCCHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHCHHHHHHHHHHHHHHHHHH DNTRQLLTKTFRRSFLIYRYHIAVALLLPLLALLIPPYQRSWMELLHPYDVAPLKTVLLD HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHCCCCCHHHHHHHHH LVLLHQGDYLDILPLYAWLLLLCPALLLLVRRVGAVPVLAVSFGFWVAGQFVDPMQLIAS HHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHCCCCHHHHHHH SFGAQYGTGFFNLISWQFLFTLGLCLGISGQWLDRLCANKMMLATVAVCCLVFFAFRHSD HHCCHHCCHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCC LAVNHSLLVDRSKLPIHRLLNFCFLMVLLRQMLQNVPRDFFVPYVEYIGRHSLQIFSLHV HHCCHHHHCCCCCCCHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHCCCHHHHHHHHH LVIYLFRPVAWRMDSMFGEAGLTALSLVIFALSTLPVYVYNRYRQTSSLLFRQGLDSGLR HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCC >Mature Secondary Structure MERDRRIDTIRGLLVAIMIIDHVGGYLKLATAQTLGYVSAAEGFVFLSGFVCAKVYGRYL CCCCHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHCHHHHHHHHHHHHHHHHHH DNTRQLLTKTFRRSFLIYRYHIAVALLLPLLALLIPPYQRSWMELLHPYDVAPLKTVLLD HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHCCCCCHHHHHHHHH LVLLHQGDYLDILPLYAWLLLLCPALLLLVRRVGAVPVLAVSFGFWVAGQFVDPMQLIAS HHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHCCCCHHHHHHH SFGAQYGTGFFNLISWQFLFTLGLCLGISGQWLDRLCANKMMLATVAVCCLVFFAFRHSD HHCCHHCCHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCC LAVNHSLLVDRSKLPIHRLLNFCFLMVLLRQMLQNVPRDFFVPYVEYIGRHSLQIFSLHV HHCCHHHHCCCCCCCHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHCCCHHHHHHHHH LVIYLFRPVAWRMDSMFGEAGLTALSLVIFALSTLPVYVYNRYRQTSSLLFRQGLDSGLR HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA