| Definition | Geobacter sulfurreducens PCA chromosome, complete genome. |
|---|---|
| Accession | NC_002939 |
| Length | 3,814,139 |
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The map label for this gene is fusA-1 [H]
Identifier: 39997031
GI number: 39997031
Start: 2113735
End: 2115828
Strand: Reverse
Name: fusA-1 [H]
Synonym: GSU1933
Alternate gene names: 39997031
Gene position: 2115828-2113735 (Counterclockwise)
Preceding gene: 39997032
Following gene: 39997030
Centisome position: 55.47
GC content: 58.98
Gene sequence:
>2094_bases ATGGGCAAGTATGATACCGCGAAGCTGAGAAACCTTGGAATTGTGGCCCACGGGGGCGCCGGCAAGACCTCGCTCACCGA GGCCATCCTGTACACGGCCGGGATGATCGACCGCCTCGGCCGGGTGGACGACGGCACCTCCACCATGGATTTCGAGCCCG AGGAGATCAAGCGCAAGATCACGATTTCGTCCTCCCTGGATCACTGCGAGTGGAACGGTCATTCACTCCATATTGTCGAT ACCCCTGGCTACGGCAACTTCATCGCCGATACCCGGGCCTGCATGCGTGCTCTTGGCGGCTGCGTTGTCATTCTTTCTGC CATCTCGGGGGTCAAGGTGCAGACCGAGGAGGTCTGGGAGTGGGCCAACGAGTTCGAGTTGCCGCGCATCGCCTTCGTGA ACAAGATGGACCGGGAATATGCCAATTTCCTGCGGGCCATCGACGATATGGAGAAATCACTCAAGGCTCGTGGGGTTGCC GTCCAGATGCCGCTTGGCGCGGCTGAGACCTTCGAGGGGGTCATCGACCTGATCACGATGAAAGCGTACCGTTACGCCAA AGACACCTCCGGCACCTTCAAGGAAGAAGAAATTCCCGCCGAGTATCGTGACGAGGCCCAGCGGCTCCGCGAGCATCTGG TTGAAACCGTGGCCGAGGCTTATGACGGCCTCACCGAGAAGTACCTGGAAACGGGTGAGCTGACCGAGGAGGAGATCCTG GACGGCCTGCGGGTGGGAACCCTGCGTTACACCTTCACACCGGTCTTCTGCGGTTCGGCCACCATGAACATCGGCGTGCG TCATCTGCTGGATTATATCTGCGCCTGCCTGCCGTCACCCCAGGATCGGGGAGCCGTTGCCGGTGCCAACCCCAAGAACG GCGAACCGATCGAGCGGCGCCCGGAGGAGAGTGAGCCCTTCTCTGCCCTGGTCTTCAAGACCACCTCTGATCCCTACACC GGCAAGATATCCATCTTCCGGGTCTATTCCGGCGTCCTCAATTCCGACTCCACCATCTACAATCCGGTCCGTGAATGCGA GGAGCGGATCGGCCAGATCTATGAACTGGAGGGCAAAAAGCAGAAGCCGATCAAGCAGGCCGTTGCCGGCGACATCGTTG CGGTTGCCAAGCTCAAGGAAACCCTCACGGGCGACACCCTCTGCGACAAGGATCACCCCATCATCTACGAACCGGCGAAA CCGCTCCAGCCGGTGATTTCCTACGCGGTCCAGCCCAAGACCAAGAATGACGAGGACAAGATCCACGGTGCACTCCAGAG GCTCATGGAAGAGGATCAGACCATTCAGGTCCGCCGCGACGAGAAGACCCGGGAACTGATTCTTTCAGGCATGGGTCAAG TTCACCTGGAAGTGACCATCGAGAAGCTCAAGCGGAAGTTCAACGTAGACGTGGAAATGAAGACGCAGAAAGTTCCCTAC CTTGAAACCTTCAAAGCCCAGGTCAAGGCCCAAGGCAAGTACAAGAAGCAATCCGGCGGACGGGGCCAGTACGGCGACTG CTGGGTTGAATTCTCGCCGCTCGGCCGGGGAGATGGGTTCCAGTTCGAGGATAAGATCGTGGGTGGTGTTATACCCCGAC AGTATATTCCTGCCGTGGAAAAAGGGATCTTCGAGGCATCCCAGGACGGCTTCCTTGCCGGCTACCCCCTGGTGGACTTC AAGGCGGCGGTCTATGACGGCTCTTTCCACACGGTTGATTCGTCGGAGATGGCGTTCAAGGTGGCCGGCTCCCTCGCGTT CAAAAAGGCCATGGAGACGGCCAAGGTGGTGCTGCTGGAGCCGATGATGAACATGAAGGTCACCGTGCCCGAAGAGACCA TGGGCGACGTCATCGGTGACCTGAACTCCCGTCGGGGTAAGGTGGTGGGGGTTGAGCCCAAGGCCAATTCCCAGATCATC CGTGCCGTGGTCCCCATGTCCGAGGTGCTGGCCTATGCCAACGACCTCAAGTCCATGACGAGCGACCGAGGGCTTTTCAC CATGGAATTCTCCCACTACGAGGAAGTCCCGACGCATCTGGCGCAGAAAGTCGTTGCCGAGTCCCAGAAGGCGGAAGGCA AGAATAATCATTAA
Upstream 100 bases:
>100_bases CAGGGAGTGAGACAGCGGATAATTGCAGCGGATGTGAAGTGCCCACTGTGGGAATCACGGGTCGACGCCGACCTCTACCT TACACGTCACGGGAGGATGT
Downstream 100 bases:
>100_bases GCTGCAGCGGGTCACAGGCGGCGGACGCACCGACAGACGGCGCTCCGCGCCCTGCGCACGGCAGCGGTTTTCGGAGGAGG TAACGAGCGTTATGAACATC
Product: elongation factor G
Products: GDP; phosphate
Alternate protein names: EF-G [H]
Number of amino acids: Translated: 697; Mature: 696
Protein sequence:
>697_residues MGKYDTAKLRNLGIVAHGGAGKTSLTEAILYTAGMIDRLGRVDDGTSTMDFEPEEIKRKITISSSLDHCEWNGHSLHIVD TPGYGNFIADTRACMRALGGCVVILSAISGVKVQTEEVWEWANEFELPRIAFVNKMDREYANFLRAIDDMEKSLKARGVA VQMPLGAAETFEGVIDLITMKAYRYAKDTSGTFKEEEIPAEYRDEAQRLREHLVETVAEAYDGLTEKYLETGELTEEEIL DGLRVGTLRYTFTPVFCGSATMNIGVRHLLDYICACLPSPQDRGAVAGANPKNGEPIERRPEESEPFSALVFKTTSDPYT GKISIFRVYSGVLNSDSTIYNPVRECEERIGQIYELEGKKQKPIKQAVAGDIVAVAKLKETLTGDTLCDKDHPIIYEPAK PLQPVISYAVQPKTKNDEDKIHGALQRLMEEDQTIQVRRDEKTRELILSGMGQVHLEVTIEKLKRKFNVDVEMKTQKVPY LETFKAQVKAQGKYKKQSGGRGQYGDCWVEFSPLGRGDGFQFEDKIVGGVIPRQYIPAVEKGIFEASQDGFLAGYPLVDF KAAVYDGSFHTVDSSEMAFKVAGSLAFKKAMETAKVVLLEPMMNMKVTVPEETMGDVIGDLNSRRGKVVGVEPKANSQII RAVVPMSEVLAYANDLKSMTSDRGLFTMEFSHYEEVPTHLAQKVVAESQKAEGKNNH
Sequences:
>Translated_697_residues MGKYDTAKLRNLGIVAHGGAGKTSLTEAILYTAGMIDRLGRVDDGTSTMDFEPEEIKRKITISSSLDHCEWNGHSLHIVD TPGYGNFIADTRACMRALGGCVVILSAISGVKVQTEEVWEWANEFELPRIAFVNKMDREYANFLRAIDDMEKSLKARGVA VQMPLGAAETFEGVIDLITMKAYRYAKDTSGTFKEEEIPAEYRDEAQRLREHLVETVAEAYDGLTEKYLETGELTEEEIL DGLRVGTLRYTFTPVFCGSATMNIGVRHLLDYICACLPSPQDRGAVAGANPKNGEPIERRPEESEPFSALVFKTTSDPYT GKISIFRVYSGVLNSDSTIYNPVRECEERIGQIYELEGKKQKPIKQAVAGDIVAVAKLKETLTGDTLCDKDHPIIYEPAK PLQPVISYAVQPKTKNDEDKIHGALQRLMEEDQTIQVRRDEKTRELILSGMGQVHLEVTIEKLKRKFNVDVEMKTQKVPY LETFKAQVKAQGKYKKQSGGRGQYGDCWVEFSPLGRGDGFQFEDKIVGGVIPRQYIPAVEKGIFEASQDGFLAGYPLVDF KAAVYDGSFHTVDSSEMAFKVAGSLAFKKAMETAKVVLLEPMMNMKVTVPEETMGDVIGDLNSRRGKVVGVEPKANSQII RAVVPMSEVLAYANDLKSMTSDRGLFTMEFSHYEEVPTHLAQKVVAESQKAEGKNNH >Mature_696_residues GKYDTAKLRNLGIVAHGGAGKTSLTEAILYTAGMIDRLGRVDDGTSTMDFEPEEIKRKITISSSLDHCEWNGHSLHIVDT PGYGNFIADTRACMRALGGCVVILSAISGVKVQTEEVWEWANEFELPRIAFVNKMDREYANFLRAIDDMEKSLKARGVAV QMPLGAAETFEGVIDLITMKAYRYAKDTSGTFKEEEIPAEYRDEAQRLREHLVETVAEAYDGLTEKYLETGELTEEEILD GLRVGTLRYTFTPVFCGSATMNIGVRHLLDYICACLPSPQDRGAVAGANPKNGEPIERRPEESEPFSALVFKTTSDPYTG KISIFRVYSGVLNSDSTIYNPVRECEERIGQIYELEGKKQKPIKQAVAGDIVAVAKLKETLTGDTLCDKDHPIIYEPAKP LQPVISYAVQPKTKNDEDKIHGALQRLMEEDQTIQVRRDEKTRELILSGMGQVHLEVTIEKLKRKFNVDVEMKTQKVPYL ETFKAQVKAQGKYKKQSGGRGQYGDCWVEFSPLGRGDGFQFEDKIVGGVIPRQYIPAVEKGIFEASQDGFLAGYPLVDFK AAVYDGSFHTVDSSEMAFKVAGSLAFKKAMETAKVVLLEPMMNMKVTVPEETMGDVIGDLNSRRGKVVGVEPKANSQIIR AVVPMSEVLAYANDLKSMTSDRGLFTMEFSHYEEVPTHLAQKVVAESQKAEGKNNH
Specific function: Catalyzes the GTP-dependent ribosomal translocation step during translation elongation. During this step, the ribosome changes from the pre-translocational (PRE) to the post- translocational (POST) state as the newly formed A-site-bound peptidyl-tRNA and
COG id: COG0480
COG function: function code J; Translation elongation factors (GTPases)
Gene ontology:
Cell location: Cytoplasm [H]
Metaboloic importance: Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the GTP-binding elongation factor family. EF-G/EF-2 subfamily [H]
Homologues:
Organism=Homo sapiens, GI18390331, Length=699, Percent_Identity=34.0486409155937, Blast_Score=401, Evalue=1e-111, Organism=Homo sapiens, GI19923640, Length=708, Percent_Identity=30.3672316384181, Blast_Score=326, Evalue=4e-89, Organism=Homo sapiens, GI25306283, Length=392, Percent_Identity=34.9489795918367, Blast_Score=214, Evalue=2e-55, Organism=Homo sapiens, GI25306287, Length=289, Percent_Identity=37.3702422145329, Blast_Score=181, Evalue=3e-45, Organism=Homo sapiens, GI4503483, Length=856, Percent_Identity=22.0794392523364, Blast_Score=112, Evalue=2e-24, Organism=Homo sapiens, GI157426893, Length=156, Percent_Identity=28.8461538461538, Blast_Score=72, Evalue=2e-12, Organism=Homo sapiens, GI94966754, Length=138, Percent_Identity=30.4347826086957, Blast_Score=70, Evalue=5e-12, Organism=Escherichia coli, GI1789738, Length=692, Percent_Identity=45.8092485549133, Blast_Score=602, Evalue=1e-173, Organism=Escherichia coli, GI1790835, Length=486, Percent_Identity=25.5144032921811, Blast_Score=142, Evalue=1e-34, Organism=Escherichia coli, GI48994988, Length=173, Percent_Identity=30.635838150289, Blast_Score=80, Evalue=4e-16, Organism=Caenorhabditis elegans, GI17533571, Length=702, Percent_Identity=32.1937321937322, Blast_Score=380, Evalue=1e-105, Organism=Caenorhabditis elegans, GI17556745, Length=710, Percent_Identity=25.4929577464789, Blast_Score=244, Evalue=1e-64, Organism=Saccharomyces cerevisiae, GI6323098, Length=697, Percent_Identity=33.428981348637, Blast_Score=398, Evalue=1e-111, Organism=Saccharomyces cerevisiae, GI6322359, Length=790, Percent_Identity=27.4683544303797, Blast_Score=286, Evalue=8e-78, Organism=Saccharomyces cerevisiae, GI6324707, Length=167, Percent_Identity=26.9461077844311, Blast_Score=64, Evalue=6e-11, Organism=Saccharomyces cerevisiae, GI6320593, Length=167, Percent_Identity=26.9461077844311, Blast_Score=64, Evalue=6e-11, Organism=Drosophila melanogaster, GI24582462, Length=699, Percent_Identity=32.761087267525, Blast_Score=392, Evalue=1e-109, Organism=Drosophila melanogaster, GI221458488, Length=725, Percent_Identity=25.9310344827586, Blast_Score=249, Evalue=3e-66, Organism=Drosophila melanogaster, GI24585709, Length=150, Percent_Identity=31.3333333333333, Blast_Score=72, Evalue=2e-12, Organism=Drosophila melanogaster, GI24585711, Length=150, Percent_Identity=31.3333333333333, Blast_Score=71, Evalue=2e-12, Organism=Drosophila melanogaster, GI24585713, Length=150, Percent_Identity=31.3333333333333, Blast_Score=71, Evalue=2e-12, Organism=Drosophila melanogaster, GI78706572, Length=177, Percent_Identity=25.9887005649718, Blast_Score=67, Evalue=4e-11,
Paralogues:
None
Copy number: 1080 Molecules/Cell In: Growth Phase, Minimal Media (Based on E. coli). 2520 Molecules/Cell In: Growth-Phase, Minimal-Media (Based on E. coli). 20 Molecules/Cell In: Stationary Phase, Rich Media (Based on E. coli). 7984 Molecules/Cell In: Growth Phase, Gl
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR009022 - InterPro: IPR000795 - InterPro: IPR020568 - InterPro: IPR014721 - InterPro: IPR005225 - InterPro: IPR004540 - InterPro: IPR000640 - InterPro: IPR005517 - InterPro: IPR004161 - InterPro: IPR009000 [H]
Pfam domain/function: PF00679 EFG_C; PF03764 EFG_IV; PF00009 GTP_EFTU; PF03144 GTP_EFTU_D2 [H]
EC number: 3.6.5.3
Molecular weight: Translated: 77464; Mature: 77333
Theoretical pI: Translated: 5.27; Mature: 5.27
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.3 %Cys (Translated Protein) 3.0 %Met (Translated Protein) 4.3 %Cys+Met (Translated Protein) 1.3 %Cys (Mature Protein) 2.9 %Met (Mature Protein) 4.2 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MGKYDTAKLRNLGIVAHGGAGKTSLTEAILYTAGMIDRLGRVDDGTSTMDFEPEEIKRKI CCCCCCCHHHCCCEEEECCCCCHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCHHHHHHEE TISSSLDHCEWNGHSLHIVDTPGYGNFIADTRACMRALGGCVVILSAISGVKVQTEEVWE EECCCCCCCCCCCCEEEEEECCCCCCHHHHHHHHHHHHHHHHHHHHHHCCCEEEHHHHHH WANEFELPRIAFVNKMDREYANFLRAIDDMEKSLKARGVAVQMPLGAAETFEGVIDLITM HHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCEEEEECCCCHHHHHHHHHHHHH KAYRYAKDTSGTFKEEEIPAEYRDEAQRLREHLVETVAEAYDGLTEKYLETGELTEEEIL HHHHHHCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHH DGLRVGTLRYTFTPVFCGSATMNIGVRHLLDYICACLPSPQDRGAVAGANPKNGEPIERR CCHHCCEEEEEEEEEEECCCHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCC PEESEPFSALVFKTTSDPYTGKISIFRVYSGVLNSDSTIYNPVRECEERIGQIYELEGKK CCCCCCCEEEEEEECCCCCCCCEEEEEEHHHHHCCCCHHHHHHHHHHHHHCCEEECCCCC QKPIKQAVAGDIVAVAKLKETLTGDTLCDKDHPIIYEPAKPLQPVISYAVQPKTKNDEDK CCHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCEEECCCCHHHHHHHHHCCCCCCCCHHH IHGALQRLMEEDQTIQVRRDEKTRELILSGMGQVHLEVTIEKLKRKFNVDVEMKTQKVPY HHHHHHHHHCCCCEEEEECCHHHHHHHHHCCCCEEEEEHHHHHHHHHCCCEEEECCCCCH LETFKAQVKAQGKYKKQSGGRGQYGDCWVEFSPLGRGDGFQFEDKIVGGVIPRQYIPAVE HHHHHHHHHHCCCCCCCCCCCCCCCCEEEEECCCCCCCCCCCHHHHHCCCCCHHHHHHHH KGIFEASQDGFLAGYPLVDFKAAVYDGSFHTVDSSEMAFKVAGSLAFKKAMETAKVVLLE HHHHHCCCCCCEECCCHHHCCCEEECCCEEECCCCHHHHHHHHHHHHHHHHHHHHHHEEE PMMNMKVTVPEETMGDVIGDLNSRRGKVVGVEPKANSQIIRAVVPMSEVLAYANDLKSMT CCCCCEEECCHHHHHHHHHCCCCCCCCEEEECCCCCCHHHHHHHCHHHHHHHHHHHHHHH SDRGLFTMEFSHYEEVPTHLAQKVVAESQKAEGKNNH CCCCEEEEEHHHHHHHHHHHHHHHHHHHHHCCCCCCC >Mature Secondary Structure GKYDTAKLRNLGIVAHGGAGKTSLTEAILYTAGMIDRLGRVDDGTSTMDFEPEEIKRKI CCCCCCHHHCCCEEEECCCCCHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCHHHHHHEE TISSSLDHCEWNGHSLHIVDTPGYGNFIADTRACMRALGGCVVILSAISGVKVQTEEVWE EECCCCCCCCCCCCEEEEEECCCCCCHHHHHHHHHHHHHHHHHHHHHHCCCEEEHHHHHH WANEFELPRIAFVNKMDREYANFLRAIDDMEKSLKARGVAVQMPLGAAETFEGVIDLITM HHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCEEEEECCCCHHHHHHHHHHHHH KAYRYAKDTSGTFKEEEIPAEYRDEAQRLREHLVETVAEAYDGLTEKYLETGELTEEEIL HHHHHHCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHH DGLRVGTLRYTFTPVFCGSATMNIGVRHLLDYICACLPSPQDRGAVAGANPKNGEPIERR CCHHCCEEEEEEEEEEECCCHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCC PEESEPFSALVFKTTSDPYTGKISIFRVYSGVLNSDSTIYNPVRECEERIGQIYELEGKK CCCCCCCEEEEEEECCCCCCCCEEEEEEHHHHHCCCCHHHHHHHHHHHHHCCEEECCCCC QKPIKQAVAGDIVAVAKLKETLTGDTLCDKDHPIIYEPAKPLQPVISYAVQPKTKNDEDK CCHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCEEECCCCHHHHHHHHHCCCCCCCCHHH IHGALQRLMEEDQTIQVRRDEKTRELILSGMGQVHLEVTIEKLKRKFNVDVEMKTQKVPY HHHHHHHHHCCCCEEEEECCHHHHHHHHHCCCCEEEEEHHHHHHHHHCCCEEEECCCCCH LETFKAQVKAQGKYKKQSGGRGQYGDCWVEFSPLGRGDGFQFEDKIVGGVIPRQYIPAVE HHHHHHHHHHCCCCCCCCCCCCCCCCEEEEECCCCCCCCCCCHHHHHCCCCCHHHHHHHH KGIFEASQDGFLAGYPLVDFKAAVYDGSFHTVDSSEMAFKVAGSLAFKKAMETAKVVLLE HHHHHCCCCCCEECCCHHHCCCEEECCCEEECCCCHHHHHHHHHHHHHHHHHHHHHHEEE PMMNMKVTVPEETMGDVIGDLNSRRGKVVGVEPKANSQIIRAVVPMSEVLAYANDLKSMT CCCCCEEECCHHHHHHHHHCCCCCCCCEEEECCCCCCHHHHHHHCHHHHHHHHHHHHHHH SDRGLFTMEFSHYEEVPTHLAQKVVAESQKAEGKNNH CCCCEEEEEHHHHHHHHHHHHHHHHHHHHHCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: GTP; H2O
Specific reaction: GTP + H2O = GDP + phosphate
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA