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The map label for this gene is yhiD [H]

Identifier: 39997027

GI number: 39997027

Start: 2109917

End: 2110594

Strand: Reverse

Name: yhiD [H]

Synonym: GSU1929

Alternate gene names: 39997027

Gene position: 2110594-2109917 (Counterclockwise)

Preceding gene: 39997028

Following gene: 39997026

Centisome position: 55.34

GC content: 58.7

Gene sequence:

>678_bases
ATGGATTTCACGTTTGAGATGATAGGAAGGCTTGTCCTCGCGTCTGTCCTTGGCGCACTCATTGGTCTGGAGCGCGAGCT
GCACGGTCGTCCCGCCGGTTTCAGAACCCACCTGCTCGTTTCCCTTGGCGCCTGCCTCTTTGTTGTCACCTCTATCGAGT
TCCATCGTCTCTATGCCAATACGAGCGGCGTAGGCTCCATCGGTGCCGACCCCGGCCGTGTAGCAGCCCAGGTGGTGGCC
GGTATCGGCTTTCTGGGCGCCGGGGCCATAATTCGCGAAGGAACTTCAATCAGGGGTCTTACCACCGCTGCCTGCCTCTG
GGTCGCCGCCGCCATCGGACTTTCCTGCGGTATCGGTCTGTTCGCCATCTCGCTGTTCGTCACTGCCATCTCGCTGGCGG
CCCTGCTTCTGCTCAAGAGGGTCGAGGGGCTGCTTTCCCGCGATACGTACACCTCCGTCAAGGTCTGGAGCGACGATCTG
GAAGGACAGCTGGAACGTATTGAACAGATTTTGCAAGAGTGTCGTCTTCAGGTACTCACAATGAGCGTGGAGAGGGATAT
GACGGCAGCAAGTCTGCGTCTCACCTATCAGGTCAAAGTCACTTCCCGCGGTCATGCATGCGGCATTATGGATGCAGTGG
TGTCCGTGGCCGGCGTTAAGCGAGTCAGGATCGACTGA

Upstream 100 bases:

>100_bases
CTGCGAGTCCCGCTACTCCCTGACCGTTACGCTCGATCCAGAGCCAACCGACGGCTGACATCACACTCTGTCGGACCATT
TCCGGCGCCTGTGAGGAACC

Downstream 100 bases:

>100_bases
TTTGCCGGCCGGCGTCACGAGTGAAGTGTCACGTGCTAAAACAGCGTGCAATTTTTAGCATTCTATTATGAAAATATTAA
ATGGTTGCAATAAATGCGCG

Product: MgtC family protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 225; Mature: 225

Protein sequence:

>225_residues
MDFTFEMIGRLVLASVLGALIGLERELHGRPAGFRTHLLVSLGACLFVVTSIEFHRLYANTSGVGSIGADPGRVAAQVVA
GIGFLGAGAIIREGTSIRGLTTAACLWVAAAIGLSCGIGLFAISLFVTAISLAALLLLKRVEGLLSRDTYTSVKVWSDDL
EGQLERIEQILQECRLQVLTMSVERDMTAASLRLTYQVKVTSRGHACGIMDAVVSVAGVKRVRID

Sequences:

>Translated_225_residues
MDFTFEMIGRLVLASVLGALIGLERELHGRPAGFRTHLLVSLGACLFVVTSIEFHRLYANTSGVGSIGADPGRVAAQVVA
GIGFLGAGAIIREGTSIRGLTTAACLWVAAAIGLSCGIGLFAISLFVTAISLAALLLLKRVEGLLSRDTYTSVKVWSDDL
EGQLERIEQILQECRLQVLTMSVERDMTAASLRLTYQVKVTSRGHACGIMDAVVSVAGVKRVRID
>Mature_225_residues
MDFTFEMIGRLVLASVLGALIGLERELHGRPAGFRTHLLVSLGACLFVVTSIEFHRLYANTSGVGSIGADPGRVAAQVVA
GIGFLGAGAIIREGTSIRGLTTAACLWVAAAIGLSCGIGLFAISLFVTAISLAALLLLKRVEGLLSRDTYTSVKVWSDDL
EGQLERIEQILQECRLQVLTMSVERDMTAASLRLTYQVKVTSRGHACGIMDAVVSVAGVKRVRID

Specific function: Unknown

COG id: COG1285

COG function: function code S; Uncharacterized membrane protein

Gene ontology:

Cell location: Cell inner membrane; Multi-pass membrane protein (Potential) [H]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the MgtC/SapB family [H]

Homologues:

Organism=Escherichia coli, GI1789924, Length=185, Percent_Identity=32.972972972973, Blast_Score=112, Evalue=3e-26,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR003416 [H]

Pfam domain/function: PF02308 MgtC [H]

EC number: NA

Molecular weight: Translated: 23917; Mature: 23917

Theoretical pI: Translated: 8.22; Mature: 8.22

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

2.2 %Cys     (Translated Protein)
2.2 %Met     (Translated Protein)
4.4 %Cys+Met (Translated Protein)
2.2 %Cys     (Mature Protein)
2.2 %Met     (Mature Protein)
4.4 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MDFTFEMIGRLVLASVLGALIGLERELHGRPAGFRTHLLVSLGACLFVVTSIEFHRLYAN
CCCHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHCC
TSGVGSIGADPGRVAAQVVAGIGFLGAGAIIREGTSIRGLTTAACLWVAAAIGLSCGIGL
CCCCCCCCCCHHHHHHHHHHHHHHHHCCHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHH
FAISLFVTAISLAALLLLKRVEGLLSRDTYTSVKVWSDDLEGQLERIEQILQECRLQVLT
HHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCEEEEECCHHHHHHHHHHHHHHHHHHHHHH
MSVERDMTAASLRLTYQVKVTSRGHACGIMDAVVSVAGVKRVRID
HHHHHCCHHHEEEEEEEEEECCCCCHHHHHHHHHHHHCCHHCCCC
>Mature Secondary Structure
MDFTFEMIGRLVLASVLGALIGLERELHGRPAGFRTHLLVSLGACLFVVTSIEFHRLYAN
CCCHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHCC
TSGVGSIGADPGRVAAQVVAGIGFLGAGAIIREGTSIRGLTTAACLWVAAAIGLSCGIGL
CCCCCCCCCCHHHHHHHHHHHHHHHHCCHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHH
FAISLFVTAISLAALLLLKRVEGLLSRDTYTSVKVWSDDLEGQLERIEQILQECRLQVLT
HHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCEEEEECCHHHHHHHHHHHHHHHHHHHHHH
MSVERDMTAASLRLTYQVKVTSRGHACGIMDAVVSVAGVKRVRID
HHHHHCCHHHEEEEEEEEEECCCCCHHHHHHHHHHHHCCHHCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 7.0

TargetDB status: NA

Availability: NA

References: 11206551; 11258796 [H]