Definition Geobacter sulfurreducens PCA chromosome, complete genome.
Accession NC_002939
Length 3,814,139

Click here to switch to the map view.

The map label for this gene is cdsA [H]

Identifier: 39997014

GI number: 39997014

Start: 2095545

End: 2096246

Strand: Reverse

Name: cdsA [H]

Synonym: GSU1916

Alternate gene names: 39997014

Gene position: 2096246-2095545 (Counterclockwise)

Preceding gene: 39997015

Following gene: 39997013

Centisome position: 54.96

GC content: 58.83

Gene sequence:

>702_bases
ATGGCGCTTCCGGACCGCAGGGCGGAAGGAGTAGCTGCTTCCCTGGCCGGGGCACTTATACCCGCGTTCCTGGCTGCTCA
GGATCGTATCATCGAAATGGTTCCTTTCCGCACGTCGGCAACCCTGTTCGCTTTTGTCCTGACGATTGTCTTCCTCGCAT
TCGCTCTCAGGGTTCTGTTCAGCTTTCGCGATGTCCGGTCGGCCGCAGTCGAAACGGCTCTGTTCGCGACGGGGTTTCTC
TACGTGCCGCTGCTCCTGACCCACCTTGCATGGCTGCGCGCTCTTCCGGACGGGGTCGGCTGGATCTTCCTCGTTCTCGT
TATCGTCATGTCCGGAGATACGGCAGCGTACTATGTGGGAAGTAATCTGGGCCGCCGCAAGCTTTATCCGTCAGTTAGTC
CCAACAAGAGCGTTGAGGGGGCGATCGGCGGATTACTCGGCAGCCTTGCCGGAACCTTTGTGGCGCGTCTTACCTTTTTC
CCCGGACTGACCGTCCTTGACTGCATTGCCACGGCGCTCCTGTTGGGAGTTCTCGGTCAGGTCGGCGACCTCTTCGAGTC
GTTGCTCAAGCGCAGTTTCGGCGTCAAGGATTCGGGAACGATCGTGCCCGGACACGGCGGCATTCTCGACCGATTGGACA
GTATTCTGTTTGCTGTGCCGGCTGCCTACTACTACGCTCTTTTCGTGTTCATGAACCGATAG

Upstream 100 bases:

>100_bases
CCTCCCTCTGCTGATTCTGTTCGTCCTCAAGGCGAGCTATGTTCTTTTTGCATCGTTCGTCGTTGTTCTCACGTTTCTTG
GGCTCAGCGAATACTATCGT

Downstream 100 bases:

>100_bases
GTTTGACAGGGTATCCATGAAAAACATCACCATACTCGGATCAACAGGCTCCATTGGGGTCAGCACGCTGGAAGTTGTCT
CCGCCCACCCCGACCGCTTC

Product: phosphate transporter

Products: NA

Alternate protein names: CDP-DAG synthase; CDP-DG synthase; CDP-diacylglycerol synthase; CDS; CDP-diglyceride pyrophosphorylase; CDP-diglyceride synthase; CTP:phosphatidate cytidylyltransferase [H]

Number of amino acids: Translated: 233; Mature: 232

Protein sequence:

>233_residues
MALPDRRAEGVAASLAGALIPAFLAAQDRIIEMVPFRTSATLFAFVLTIVFLAFALRVLFSFRDVRSAAVETALFATGFL
YVPLLLTHLAWLRALPDGVGWIFLVLVIVMSGDTAAYYVGSNLGRRKLYPSVSPNKSVEGAIGGLLGSLAGTFVARLTFF
PGLTVLDCIATALLLGVLGQVGDLFESLLKRSFGVKDSGTIVPGHGGILDRLDSILFAVPAAYYYALFVFMNR

Sequences:

>Translated_233_residues
MALPDRRAEGVAASLAGALIPAFLAAQDRIIEMVPFRTSATLFAFVLTIVFLAFALRVLFSFRDVRSAAVETALFATGFL
YVPLLLTHLAWLRALPDGVGWIFLVLVIVMSGDTAAYYVGSNLGRRKLYPSVSPNKSVEGAIGGLLGSLAGTFVARLTFF
PGLTVLDCIATALLLGVLGQVGDLFESLLKRSFGVKDSGTIVPGHGGILDRLDSILFAVPAAYYYALFVFMNR
>Mature_232_residues
ALPDRRAEGVAASLAGALIPAFLAAQDRIIEMVPFRTSATLFAFVLTIVFLAFALRVLFSFRDVRSAAVETALFATGFLY
VPLLLTHLAWLRALPDGVGWIFLVLVIVMSGDTAAYYVGSNLGRRKLYPSVSPNKSVEGAIGGLLGSLAGTFVARLTFFP
GLTVLDCIATALLLGVLGQVGDLFESLLKRSFGVKDSGTIVPGHGGILDRLDSILFAVPAAYYYALFVFMNR

Specific function: Unknown

COG id: COG0575

COG function: function code I; CDP-diglyceride synthetase

Gene ontology:

Cell location: Cell membrane; Multi-pass membrane protein [H]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the CDS family [H]

Homologues:

Organism=Escherichia coli, GI1787677, Length=153, Percent_Identity=38.562091503268, Blast_Score=106, Evalue=1e-24,
Organism=Escherichia coli, GI87081696, Length=138, Percent_Identity=44.2028985507246, Blast_Score=99, Evalue=2e-22,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR000374 [H]

Pfam domain/function: PF01148 CTP_transf_1 [H]

EC number: =2.7.7.41 [H]

Molecular weight: Translated: 24942; Mature: 24811

Theoretical pI: Translated: 9.37; Mature: 9.37

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.4 %Cys     (Translated Protein)
1.7 %Met     (Translated Protein)
2.1 %Cys+Met (Translated Protein)
0.4 %Cys     (Mature Protein)
1.3 %Met     (Mature Protein)
1.7 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MALPDRRAEGVAASLAGALIPAFLAAQDRIIEMVPFRTSATLFAFVLTIVFLAFALRVLF
CCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHH
SFRDVRSAAVETALFATGFLYVPLLLTHLAWLRALPDGVGWIFLVLVIVMSGDTAAYYVG
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHCCCCCEEECC
SNLGRRKLYPSVSPNKSVEGAIGGLLGSLAGTFVARLTFFPGLTVLDCIATALLLGVLGQ
CCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHH
VGDLFESLLKRSFGVKDSGTIVPGHGGILDRLDSILFAVPAAYYYALFVFMNR
HHHHHHHHHHHHCCCCCCCCEECCCCHHHHHHHHHHHHHHHHHHHHHHHHHCC
>Mature Secondary Structure 
ALPDRRAEGVAASLAGALIPAFLAAQDRIIEMVPFRTSATLFAFVLTIVFLAFALRVLF
CCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHH
SFRDVRSAAVETALFATGFLYVPLLLTHLAWLRALPDGVGWIFLVLVIVMSGDTAAYYVG
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHCCCCCEEECC
SNLGRRKLYPSVSPNKSVEGAIGGLLGSLAGTFVARLTFFPGLTVLDCIATALLLGVLGQ
CCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHH
VGDLFESLLKRSFGVKDSGTIVPGHGGILDRLDSILFAVPAAYYYALFVFMNR
HHHHHHHHHHHHCCCCCCCCEECCCCHHHHHHHHHHHHHHHHHHHHHHHHHCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 7.0

TargetDB status: NA

Availability: NA

References: 9384377 [H]