| Definition | Geobacter sulfurreducens PCA chromosome, complete genome. |
|---|---|
| Accession | NC_002939 |
| Length | 3,814,139 |
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The map label for this gene is cdsA [H]
Identifier: 39997014
GI number: 39997014
Start: 2095545
End: 2096246
Strand: Reverse
Name: cdsA [H]
Synonym: GSU1916
Alternate gene names: 39997014
Gene position: 2096246-2095545 (Counterclockwise)
Preceding gene: 39997015
Following gene: 39997013
Centisome position: 54.96
GC content: 58.83
Gene sequence:
>702_bases ATGGCGCTTCCGGACCGCAGGGCGGAAGGAGTAGCTGCTTCCCTGGCCGGGGCACTTATACCCGCGTTCCTGGCTGCTCA GGATCGTATCATCGAAATGGTTCCTTTCCGCACGTCGGCAACCCTGTTCGCTTTTGTCCTGACGATTGTCTTCCTCGCAT TCGCTCTCAGGGTTCTGTTCAGCTTTCGCGATGTCCGGTCGGCCGCAGTCGAAACGGCTCTGTTCGCGACGGGGTTTCTC TACGTGCCGCTGCTCCTGACCCACCTTGCATGGCTGCGCGCTCTTCCGGACGGGGTCGGCTGGATCTTCCTCGTTCTCGT TATCGTCATGTCCGGAGATACGGCAGCGTACTATGTGGGAAGTAATCTGGGCCGCCGCAAGCTTTATCCGTCAGTTAGTC CCAACAAGAGCGTTGAGGGGGCGATCGGCGGATTACTCGGCAGCCTTGCCGGAACCTTTGTGGCGCGTCTTACCTTTTTC CCCGGACTGACCGTCCTTGACTGCATTGCCACGGCGCTCCTGTTGGGAGTTCTCGGTCAGGTCGGCGACCTCTTCGAGTC GTTGCTCAAGCGCAGTTTCGGCGTCAAGGATTCGGGAACGATCGTGCCCGGACACGGCGGCATTCTCGACCGATTGGACA GTATTCTGTTTGCTGTGCCGGCTGCCTACTACTACGCTCTTTTCGTGTTCATGAACCGATAG
Upstream 100 bases:
>100_bases CCTCCCTCTGCTGATTCTGTTCGTCCTCAAGGCGAGCTATGTTCTTTTTGCATCGTTCGTCGTTGTTCTCACGTTTCTTG GGCTCAGCGAATACTATCGT
Downstream 100 bases:
>100_bases GTTTGACAGGGTATCCATGAAAAACATCACCATACTCGGATCAACAGGCTCCATTGGGGTCAGCACGCTGGAAGTTGTCT CCGCCCACCCCGACCGCTTC
Product: phosphate transporter
Products: NA
Alternate protein names: CDP-DAG synthase; CDP-DG synthase; CDP-diacylglycerol synthase; CDS; CDP-diglyceride pyrophosphorylase; CDP-diglyceride synthase; CTP:phosphatidate cytidylyltransferase [H]
Number of amino acids: Translated: 233; Mature: 232
Protein sequence:
>233_residues MALPDRRAEGVAASLAGALIPAFLAAQDRIIEMVPFRTSATLFAFVLTIVFLAFALRVLFSFRDVRSAAVETALFATGFL YVPLLLTHLAWLRALPDGVGWIFLVLVIVMSGDTAAYYVGSNLGRRKLYPSVSPNKSVEGAIGGLLGSLAGTFVARLTFF PGLTVLDCIATALLLGVLGQVGDLFESLLKRSFGVKDSGTIVPGHGGILDRLDSILFAVPAAYYYALFVFMNR
Sequences:
>Translated_233_residues MALPDRRAEGVAASLAGALIPAFLAAQDRIIEMVPFRTSATLFAFVLTIVFLAFALRVLFSFRDVRSAAVETALFATGFL YVPLLLTHLAWLRALPDGVGWIFLVLVIVMSGDTAAYYVGSNLGRRKLYPSVSPNKSVEGAIGGLLGSLAGTFVARLTFF PGLTVLDCIATALLLGVLGQVGDLFESLLKRSFGVKDSGTIVPGHGGILDRLDSILFAVPAAYYYALFVFMNR >Mature_232_residues ALPDRRAEGVAASLAGALIPAFLAAQDRIIEMVPFRTSATLFAFVLTIVFLAFALRVLFSFRDVRSAAVETALFATGFLY VPLLLTHLAWLRALPDGVGWIFLVLVIVMSGDTAAYYVGSNLGRRKLYPSVSPNKSVEGAIGGLLGSLAGTFVARLTFFP GLTVLDCIATALLLGVLGQVGDLFESLLKRSFGVKDSGTIVPGHGGILDRLDSILFAVPAAYYYALFVFMNR
Specific function: Unknown
COG id: COG0575
COG function: function code I; CDP-diglyceride synthetase
Gene ontology:
Cell location: Cell membrane; Multi-pass membrane protein [H]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the CDS family [H]
Homologues:
Organism=Escherichia coli, GI1787677, Length=153, Percent_Identity=38.562091503268, Blast_Score=106, Evalue=1e-24, Organism=Escherichia coli, GI87081696, Length=138, Percent_Identity=44.2028985507246, Blast_Score=99, Evalue=2e-22,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR000374 [H]
Pfam domain/function: PF01148 CTP_transf_1 [H]
EC number: =2.7.7.41 [H]
Molecular weight: Translated: 24942; Mature: 24811
Theoretical pI: Translated: 9.37; Mature: 9.37
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.4 %Cys (Translated Protein) 1.7 %Met (Translated Protein) 2.1 %Cys+Met (Translated Protein) 0.4 %Cys (Mature Protein) 1.3 %Met (Mature Protein) 1.7 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MALPDRRAEGVAASLAGALIPAFLAAQDRIIEMVPFRTSATLFAFVLTIVFLAFALRVLF CCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHH SFRDVRSAAVETALFATGFLYVPLLLTHLAWLRALPDGVGWIFLVLVIVMSGDTAAYYVG HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHCCCCCEEECC SNLGRRKLYPSVSPNKSVEGAIGGLLGSLAGTFVARLTFFPGLTVLDCIATALLLGVLGQ CCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHH VGDLFESLLKRSFGVKDSGTIVPGHGGILDRLDSILFAVPAAYYYALFVFMNR HHHHHHHHHHHHCCCCCCCCEECCCCHHHHHHHHHHHHHHHHHHHHHHHHHCC >Mature Secondary Structure ALPDRRAEGVAASLAGALIPAFLAAQDRIIEMVPFRTSATLFAFVLTIVFLAFALRVLF CCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHH SFRDVRSAAVETALFATGFLYVPLLLTHLAWLRALPDGVGWIFLVLVIVMSGDTAAYYVG HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHCCCCCEEECC SNLGRRKLYPSVSPNKSVEGAIGGLLGSLAGTFVARLTFFPGLTVLDCIATALLLGVLGQ CCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHH VGDLFESLLKRSFGVKDSGTIVPGHGGILDRLDSILFAVPAAYYYALFVFMNR HHHHHHHHHHHHCCCCCCCCEECCCCHHHHHHHHHHHHHHHHHHHHHHHHHCC
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 7.0
TargetDB status: NA
Availability: NA
References: 9384377 [H]