Definition Geobacter sulfurreducens PCA chromosome, complete genome.
Accession NC_002939
Length 3,814,139

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The map label for this gene is 39996975

Identifier: 39996975

GI number: 39996975

Start: 2055808

End: 2056890

Strand: Reverse

Name: 39996975

Synonym: GSU1877

Alternate gene names: NA

Gene position: 2056890-2055808 (Counterclockwise)

Preceding gene: 308513310

Following gene: 39996974

Centisome position: 53.93

GC content: 61.4

Gene sequence:

>1083_bases
ATGGTCGGACCGCTGAAAATCGGCAGGCATGAAGTGAAGTATCCCCTCATCCAGGGCGGGATGGGGGTAAGGATATCGGG
GGGACGGCTTGCCGGTCATGTGGCGAAGTGTGGCGGAGTCGGCCTGGTGGCGGCTGCGGGGATATCCCTCAGTGGCCTGT
TCACTGGCGCGAATTACCTCCAGAGCAATCCCGAGGCCATGAGGAAGGAATTGCGCAAGGCCTATGCCATCGCTCCCGAC
GGGGTCATCGGCGTGAACATCATGGTGGCGCTGACCGATTACGAGGAACTGGTCCGCGCCTCCATCGACGGCGGGGCCAA
GGTCATCGTCTGCGGTGCGGGTCTTCCCCTGACCCTGCCTGAACTGACCGCCCACGCCCCCGAAGTGGCCCTGGTCCCAA
TCGTCTCGTCGGTCCGGGCGGCCCAGCTTATTGCGAAAAAGTGGGAAAAAGGTTTCGGCCGTCTGCCCGATGCGGTGGTC
GTGGAGGACCCTGACACCGCCGGCGGACACTTGGGTGAAAAGCTCGAAAATATTGGTGCCGGCACCTATGACCAATACGG
CACTATCAGGGCGATCAAGGCCTATTTTCTCGAAGAATATGGGGTTTCAGTGCCGGTTGTCGCAGCGGGAGGGATCTGGG
ATCGCGACGACGTGCTCCATGCTTTTGAGCAGGGAGCGGACGCCGTGCAGATGGCCAGCCGGTTCGTGCCGACCGTCGAG
TGCGATGCCGACGACGCCTACAAGCAGGCGTACCTTGAGTGCCGCCGGGAAGACATCGGGCTTATCATGAGTCCGGCGGG
GCTGCCCGGGCGCGCCATTCTCCGCAACCAGGACCAGATCGTGCTCCATGACCAGCTCAAGGGGGTTGCCTGCGGTAATG
GCTGTCTCAAGAAGTGCTCCTATAAAGAAACCGGCGAGCGGTTCTGCATTGTCAATGCCCTTGATCGGGCCCAGCGCGGC
GATGTGGAAACAGGGCTGGTCTTCTGCGGAACCAACGCCTGGAAAGCAGATCGGATCACCACGGTTCAGGAGATATTCGA
CGAGCTCTTCGCCGTGGGTGAGGAATCGGAAAAAGCCGCCTGA

Upstream 100 bases:

>100_bases
CGGGTTTGCAAGGTTTCCTTTTACAAAACTATTACACCTGCATCCTGGCGGTTCTGCTATGGTGTAACGGGCGTATACAA
ACGACACCACGGAGGTGTAC

Downstream 100 bases:

>100_bases
CCGTGCTGCGTTTTTTGCCCCGTGATGCTTGCCGTCACGGGGTTTTTTCGTTATGGCCGCGCTATTGACCCGCTTTCGGT
GTGGTATACTACGTTCTATT

Product: 2-nitropropane dioxygenase family oxidoreductase

Products: NA

Alternate protein names: 2-Nitropropane Dioxygenase; Enoyl-(Acyl-Carrier-Protein) Reductase II; Oxidoreductase 2-Nitropropane Dioxygenase Family; 2-Nitropropane Dioxygenase Family Oxidoreductase; 2-Nitropropane Dioxygenase-Like Protein; Dioxygenase; Oxidoreductase; Dioxygenase Related 2-Nitropropane Dioxygenase; Enoyl-[Acyl-Carrier Protein] Reductase; Enoyl-(Acyl-Carrier-Protein) Reductase; Enoyl-[Acyl-Carrier-Protein] Reductase; Oxidoreductase 2-Nitropropane Dioxygenase Family Protein; 2-Nitropropane Dioxygenase Npd; Enoyl-Acyl Carrier Protein(ACP) Reductase; Trans-2-Enoyl-ACP Reductase; Dioxygenases Related 2-Nitropropane Dioxygenase; 2-Nitropropane Dioxygenase Family; Flavin-Containing Oxidoreductase; Trans-2-Enoyl-ACP Reductase II; 2-Nitropropane Dioxygenase-Releated Protein; 2-Nitropropane Dioxygenase-Like; Enoyl-ACP Reductase; Enoyl-(Acyl-Carrier-Protein) Reductase FabK; Dioxygenase/Reductase; 2-Nitropropane Dioxygenase Family Protein; 2-Nitropropane Dioxygenase-Like Dioxygenase

Number of amino acids: Translated: 360; Mature: 360

Protein sequence:

>360_residues
MVGPLKIGRHEVKYPLIQGGMGVRISGGRLAGHVAKCGGVGLVAAAGISLSGLFTGANYLQSNPEAMRKELRKAYAIAPD
GVIGVNIMVALTDYEELVRASIDGGAKVIVCGAGLPLTLPELTAHAPEVALVPIVSSVRAAQLIAKKWEKGFGRLPDAVV
VEDPDTAGGHLGEKLENIGAGTYDQYGTIRAIKAYFLEEYGVSVPVVAAGGIWDRDDVLHAFEQGADAVQMASRFVPTVE
CDADDAYKQAYLECRREDIGLIMSPAGLPGRAILRNQDQIVLHDQLKGVACGNGCLKKCSYKETGERFCIVNALDRAQRG
DVETGLVFCGTNAWKADRITTVQEIFDELFAVGEESEKAA

Sequences:

>Translated_360_residues
MVGPLKIGRHEVKYPLIQGGMGVRISGGRLAGHVAKCGGVGLVAAAGISLSGLFTGANYLQSNPEAMRKELRKAYAIAPD
GVIGVNIMVALTDYEELVRASIDGGAKVIVCGAGLPLTLPELTAHAPEVALVPIVSSVRAAQLIAKKWEKGFGRLPDAVV
VEDPDTAGGHLGEKLENIGAGTYDQYGTIRAIKAYFLEEYGVSVPVVAAGGIWDRDDVLHAFEQGADAVQMASRFVPTVE
CDADDAYKQAYLECRREDIGLIMSPAGLPGRAILRNQDQIVLHDQLKGVACGNGCLKKCSYKETGERFCIVNALDRAQRG
DVETGLVFCGTNAWKADRITTVQEIFDELFAVGEESEKAA
>Mature_360_residues
MVGPLKIGRHEVKYPLIQGGMGVRISGGRLAGHVAKCGGVGLVAAAGISLSGLFTGANYLQSNPEAMRKELRKAYAIAPD
GVIGVNIMVALTDYEELVRASIDGGAKVIVCGAGLPLTLPELTAHAPEVALVPIVSSVRAAQLIAKKWEKGFGRLPDAVV
VEDPDTAGGHLGEKLENIGAGTYDQYGTIRAIKAYFLEEYGVSVPVVAAGGIWDRDDVLHAFEQGADAVQMASRFVPTVE
CDADDAYKQAYLECRREDIGLIMSPAGLPGRAILRNQDQIVLHDQLKGVACGNGCLKKCSYKETGERFCIVNALDRAQRG
DVETGLVFCGTNAWKADRITTVQEIFDELFAVGEESEKAA

Specific function: Unknown

COG id: COG2070

COG function: function code R; Dioxygenases related to 2-nitropropane dioxygenase

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 38272; Mature: 38272

Theoretical pI: Translated: 5.14; Mature: 5.14

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

2.5 %Cys     (Translated Protein)
1.7 %Met     (Translated Protein)
4.2 %Cys+Met (Translated Protein)
2.5 %Cys     (Mature Protein)
1.7 %Met     (Mature Protein)
4.2 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MVGPLKIGRHEVKYPLIQGGMGVRISGGRLAGHVAKCGGVGLVAAAGISLSGLFTGANYL
CCCCCCCCCHHCCCCEEECCCEEEEECCCCCHHHHHCCCCCEEHHCCCEEEHHHCCHHHH
QSNPEAMRKELRKAYAIAPDGVIGVNIMVALTDYEELVRASIDGGAKVIVCGAGLPLTLP
HCCHHHHHHHHHHHHCCCCCCEEEEEEEEEECCHHHHHHHHCCCCCEEEEECCCCCCCCH
ELTAHAPEVALVPIVSSVRAAQLIAKKWEKGFGRLPDAVVVEDPDTAGGHLGEKLENIGA
HHHCCCCCEEEHHHHHHHHHHHHHHHHHHHHHCCCCCEEEEECCCCCCCHHHHHHHHCCC
GTYDQYGTIRAIKAYFLEEYGVSVPVVAAGGIWDRDDVLHAFEQGADAVQMASRFVPTVE
CCCCCCCHHHHHHHHHHHHHCCCCEEEEECCCCCHHHHHHHHHCCCHHHHHHHHCCCEEE
CDADDAYKQAYLECRREDIGLIMSPAGLPGRAILRNQDQIVLHDQLKGVACGNGCLKKCS
CCCCHHHHHHHHHHHHHCCCEEECCCCCCCHHHCCCCCCEEEECCCCCEEECCHHHHHCC
YKETGERFCIVNALDRAQRGDVETGLVFCGTNAWKADRITTVQEIFDELFAVGEESEKAA
CCCCCCEEEEEEHHHHHHCCCCCCCEEEECCCCCCCHHHHHHHHHHHHHHHCCCCCCCCC
>Mature Secondary Structure
MVGPLKIGRHEVKYPLIQGGMGVRISGGRLAGHVAKCGGVGLVAAAGISLSGLFTGANYL
CCCCCCCCCHHCCCCEEECCCEEEEECCCCCHHHHHCCCCCEEHHCCCEEEHHHCCHHHH
QSNPEAMRKELRKAYAIAPDGVIGVNIMVALTDYEELVRASIDGGAKVIVCGAGLPLTLP
HCCHHHHHHHHHHHHCCCCCCEEEEEEEEEECCHHHHHHHHCCCCCEEEEECCCCCCCCH
ELTAHAPEVALVPIVSSVRAAQLIAKKWEKGFGRLPDAVVVEDPDTAGGHLGEKLENIGA
HHHCCCCCEEEHHHHHHHHHHHHHHHHHHHHHCCCCCEEEEECCCCCCCHHHHHHHHCCC
GTYDQYGTIRAIKAYFLEEYGVSVPVVAAGGIWDRDDVLHAFEQGADAVQMASRFVPTVE
CCCCCCCHHHHHHHHHHHHHCCCCEEEEECCCCCHHHHHHHHHCCCHHHHHHHHCCCEEE
CDADDAYKQAYLECRREDIGLIMSPAGLPGRAILRNQDQIVLHDQLKGVACGNGCLKKCS
CCCCHHHHHHHHHHHHHCCCEEECCCCCCCHHHCCCCCCEEEECCCCCEEECCHHHHHCC
YKETGERFCIVNALDRAQRGDVETGLVFCGTNAWKADRITTVQEIFDELFAVGEESEKAA
CCCCCCEEEEEEHHHHHHCCCCCCCEEEECCCCCCCHHHHHHHHHHHHHHHCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA