| Definition | Geobacter sulfurreducens PCA chromosome, complete genome. |
|---|---|
| Accession | NC_002939 |
| Length | 3,814,139 |
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The map label for this gene is 39996975
Identifier: 39996975
GI number: 39996975
Start: 2055808
End: 2056890
Strand: Reverse
Name: 39996975
Synonym: GSU1877
Alternate gene names: NA
Gene position: 2056890-2055808 (Counterclockwise)
Preceding gene: 308513310
Following gene: 39996974
Centisome position: 53.93
GC content: 61.4
Gene sequence:
>1083_bases ATGGTCGGACCGCTGAAAATCGGCAGGCATGAAGTGAAGTATCCCCTCATCCAGGGCGGGATGGGGGTAAGGATATCGGG GGGACGGCTTGCCGGTCATGTGGCGAAGTGTGGCGGAGTCGGCCTGGTGGCGGCTGCGGGGATATCCCTCAGTGGCCTGT TCACTGGCGCGAATTACCTCCAGAGCAATCCCGAGGCCATGAGGAAGGAATTGCGCAAGGCCTATGCCATCGCTCCCGAC GGGGTCATCGGCGTGAACATCATGGTGGCGCTGACCGATTACGAGGAACTGGTCCGCGCCTCCATCGACGGCGGGGCCAA GGTCATCGTCTGCGGTGCGGGTCTTCCCCTGACCCTGCCTGAACTGACCGCCCACGCCCCCGAAGTGGCCCTGGTCCCAA TCGTCTCGTCGGTCCGGGCGGCCCAGCTTATTGCGAAAAAGTGGGAAAAAGGTTTCGGCCGTCTGCCCGATGCGGTGGTC GTGGAGGACCCTGACACCGCCGGCGGACACTTGGGTGAAAAGCTCGAAAATATTGGTGCCGGCACCTATGACCAATACGG CACTATCAGGGCGATCAAGGCCTATTTTCTCGAAGAATATGGGGTTTCAGTGCCGGTTGTCGCAGCGGGAGGGATCTGGG ATCGCGACGACGTGCTCCATGCTTTTGAGCAGGGAGCGGACGCCGTGCAGATGGCCAGCCGGTTCGTGCCGACCGTCGAG TGCGATGCCGACGACGCCTACAAGCAGGCGTACCTTGAGTGCCGCCGGGAAGACATCGGGCTTATCATGAGTCCGGCGGG GCTGCCCGGGCGCGCCATTCTCCGCAACCAGGACCAGATCGTGCTCCATGACCAGCTCAAGGGGGTTGCCTGCGGTAATG GCTGTCTCAAGAAGTGCTCCTATAAAGAAACCGGCGAGCGGTTCTGCATTGTCAATGCCCTTGATCGGGCCCAGCGCGGC GATGTGGAAACAGGGCTGGTCTTCTGCGGAACCAACGCCTGGAAAGCAGATCGGATCACCACGGTTCAGGAGATATTCGA CGAGCTCTTCGCCGTGGGTGAGGAATCGGAAAAAGCCGCCTGA
Upstream 100 bases:
>100_bases CGGGTTTGCAAGGTTTCCTTTTACAAAACTATTACACCTGCATCCTGGCGGTTCTGCTATGGTGTAACGGGCGTATACAA ACGACACCACGGAGGTGTAC
Downstream 100 bases:
>100_bases CCGTGCTGCGTTTTTTGCCCCGTGATGCTTGCCGTCACGGGGTTTTTTCGTTATGGCCGCGCTATTGACCCGCTTTCGGT GTGGTATACTACGTTCTATT
Product: 2-nitropropane dioxygenase family oxidoreductase
Products: NA
Alternate protein names: 2-Nitropropane Dioxygenase; Enoyl-(Acyl-Carrier-Protein) Reductase II; Oxidoreductase 2-Nitropropane Dioxygenase Family; 2-Nitropropane Dioxygenase Family Oxidoreductase; 2-Nitropropane Dioxygenase-Like Protein; Dioxygenase; Oxidoreductase; Dioxygenase Related 2-Nitropropane Dioxygenase; Enoyl-[Acyl-Carrier Protein] Reductase; Enoyl-(Acyl-Carrier-Protein) Reductase; Enoyl-[Acyl-Carrier-Protein] Reductase; Oxidoreductase 2-Nitropropane Dioxygenase Family Protein; 2-Nitropropane Dioxygenase Npd; Enoyl-Acyl Carrier Protein(ACP) Reductase; Trans-2-Enoyl-ACP Reductase; Dioxygenases Related 2-Nitropropane Dioxygenase; 2-Nitropropane Dioxygenase Family; Flavin-Containing Oxidoreductase; Trans-2-Enoyl-ACP Reductase II; 2-Nitropropane Dioxygenase-Releated Protein; 2-Nitropropane Dioxygenase-Like; Enoyl-ACP Reductase; Enoyl-(Acyl-Carrier-Protein) Reductase FabK; Dioxygenase/Reductase; 2-Nitropropane Dioxygenase Family Protein; 2-Nitropropane Dioxygenase-Like Dioxygenase
Number of amino acids: Translated: 360; Mature: 360
Protein sequence:
>360_residues MVGPLKIGRHEVKYPLIQGGMGVRISGGRLAGHVAKCGGVGLVAAAGISLSGLFTGANYLQSNPEAMRKELRKAYAIAPD GVIGVNIMVALTDYEELVRASIDGGAKVIVCGAGLPLTLPELTAHAPEVALVPIVSSVRAAQLIAKKWEKGFGRLPDAVV VEDPDTAGGHLGEKLENIGAGTYDQYGTIRAIKAYFLEEYGVSVPVVAAGGIWDRDDVLHAFEQGADAVQMASRFVPTVE CDADDAYKQAYLECRREDIGLIMSPAGLPGRAILRNQDQIVLHDQLKGVACGNGCLKKCSYKETGERFCIVNALDRAQRG DVETGLVFCGTNAWKADRITTVQEIFDELFAVGEESEKAA
Sequences:
>Translated_360_residues MVGPLKIGRHEVKYPLIQGGMGVRISGGRLAGHVAKCGGVGLVAAAGISLSGLFTGANYLQSNPEAMRKELRKAYAIAPD GVIGVNIMVALTDYEELVRASIDGGAKVIVCGAGLPLTLPELTAHAPEVALVPIVSSVRAAQLIAKKWEKGFGRLPDAVV VEDPDTAGGHLGEKLENIGAGTYDQYGTIRAIKAYFLEEYGVSVPVVAAGGIWDRDDVLHAFEQGADAVQMASRFVPTVE CDADDAYKQAYLECRREDIGLIMSPAGLPGRAILRNQDQIVLHDQLKGVACGNGCLKKCSYKETGERFCIVNALDRAQRG DVETGLVFCGTNAWKADRITTVQEIFDELFAVGEESEKAA >Mature_360_residues MVGPLKIGRHEVKYPLIQGGMGVRISGGRLAGHVAKCGGVGLVAAAGISLSGLFTGANYLQSNPEAMRKELRKAYAIAPD GVIGVNIMVALTDYEELVRASIDGGAKVIVCGAGLPLTLPELTAHAPEVALVPIVSSVRAAQLIAKKWEKGFGRLPDAVV VEDPDTAGGHLGEKLENIGAGTYDQYGTIRAIKAYFLEEYGVSVPVVAAGGIWDRDDVLHAFEQGADAVQMASRFVPTVE CDADDAYKQAYLECRREDIGLIMSPAGLPGRAILRNQDQIVLHDQLKGVACGNGCLKKCSYKETGERFCIVNALDRAQRG DVETGLVFCGTNAWKADRITTVQEIFDELFAVGEESEKAA
Specific function: Unknown
COG id: COG2070
COG function: function code R; Dioxygenases related to 2-nitropropane dioxygenase
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 38272; Mature: 38272
Theoretical pI: Translated: 5.14; Mature: 5.14
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
2.5 %Cys (Translated Protein) 1.7 %Met (Translated Protein) 4.2 %Cys+Met (Translated Protein) 2.5 %Cys (Mature Protein) 1.7 %Met (Mature Protein) 4.2 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MVGPLKIGRHEVKYPLIQGGMGVRISGGRLAGHVAKCGGVGLVAAAGISLSGLFTGANYL CCCCCCCCCHHCCCCEEECCCEEEEECCCCCHHHHHCCCCCEEHHCCCEEEHHHCCHHHH QSNPEAMRKELRKAYAIAPDGVIGVNIMVALTDYEELVRASIDGGAKVIVCGAGLPLTLP HCCHHHHHHHHHHHHCCCCCCEEEEEEEEEECCHHHHHHHHCCCCCEEEEECCCCCCCCH ELTAHAPEVALVPIVSSVRAAQLIAKKWEKGFGRLPDAVVVEDPDTAGGHLGEKLENIGA HHHCCCCCEEEHHHHHHHHHHHHHHHHHHHHHCCCCCEEEEECCCCCCCHHHHHHHHCCC GTYDQYGTIRAIKAYFLEEYGVSVPVVAAGGIWDRDDVLHAFEQGADAVQMASRFVPTVE CCCCCCCHHHHHHHHHHHHHCCCCEEEEECCCCCHHHHHHHHHCCCHHHHHHHHCCCEEE CDADDAYKQAYLECRREDIGLIMSPAGLPGRAILRNQDQIVLHDQLKGVACGNGCLKKCS CCCCHHHHHHHHHHHHHCCCEEECCCCCCCHHHCCCCCCEEEECCCCCEEECCHHHHHCC YKETGERFCIVNALDRAQRGDVETGLVFCGTNAWKADRITTVQEIFDELFAVGEESEKAA CCCCCCEEEEEEHHHHHHCCCCCCCEEEECCCCCCCHHHHHHHHHHHHHHHCCCCCCCCC >Mature Secondary Structure MVGPLKIGRHEVKYPLIQGGMGVRISGGRLAGHVAKCGGVGLVAAAGISLSGLFTGANYL CCCCCCCCCHHCCCCEEECCCEEEEECCCCCHHHHHCCCCCEEHHCCCEEEHHHCCHHHH QSNPEAMRKELRKAYAIAPDGVIGVNIMVALTDYEELVRASIDGGAKVIVCGAGLPLTLP HCCHHHHHHHHHHHHCCCCCCEEEEEEEEEECCHHHHHHHHCCCCCEEEEECCCCCCCCH ELTAHAPEVALVPIVSSVRAAQLIAKKWEKGFGRLPDAVVVEDPDTAGGHLGEKLENIGA HHHCCCCCEEEHHHHHHHHHHHHHHHHHHHHHCCCCCEEEEECCCCCCCHHHHHHHHCCC GTYDQYGTIRAIKAYFLEEYGVSVPVVAAGGIWDRDDVLHAFEQGADAVQMASRFVPTVE CCCCCCCHHHHHHHHHHHHHCCCCEEEEECCCCCHHHHHHHHHCCCHHHHHHHHCCCEEE CDADDAYKQAYLECRREDIGLIMSPAGLPGRAILRNQDQIVLHDQLKGVACGNGCLKKCS CCCCHHHHHHHHHHHHHCCCEEECCCCCCCHHHCCCCCCEEEECCCCCEEECCHHHHHCC YKETGERFCIVNALDRAQRGDVETGLVFCGTNAWKADRITTVQEIFDELFAVGEESEKAA CCCCCCEEEEEEHHHHHHCCCCCCCEEEECCCCCCCHHHHHHHHHHHHHHHCCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA