| Definition | Geobacter sulfurreducens PCA chromosome, complete genome. |
|---|---|
| Accession | NC_002939 |
| Length | 3,814,139 |
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The map label for this gene is metK [H]
Identifier: 308513310
GI number: 308513310
Start: 2058779
End: 2059948
Strand: Reverse
Name: metK [H]
Synonym: NA
Alternate gene names: 308513310
Gene position: 2059948-2058779 (Counterclockwise)
Preceding gene: 39996979
Following gene: 39996975
Centisome position: 54.01
GC content: 59.74
Gene sequence:
>1170_bases ATGGAGATGAAGGATTATATTTTCACGTCCGAATCGGTATCCGAAGGTCACCCCGACAAGGTTGCCGACCAGGTTTCGGA TGCCATTCTCGATGCGATACTTACTCAGGACAAAAGGGCGAGGGTTGCCTGTGAAACGCTTGTTACCACCGGCATGGCGG TAATCGCCGGCGAAATCACCACCACAGCGGTGGTCGACTACCCGAAGGTCGTGCGCGAGACCATCAAGGAGATCGGCTAC AACGATTCGGCCATGGGCTTCGACTGGGAAACCTGCGCGGTCCTTGTCTCCATTGACAAGCAATCCCCCGACATCTCCCA GGGCGTCACCGAGGGGGAAGGGATGTTCAAGGAGCAGGGCGCGGGCGACCAGGGGCTTATGTTCGGCTATGCCTGCAATG AAACTCCCGAGCTTATGCCGATGACCATCATGTACTCGCACCGGCTGACCCAGAAGCTGGCCGAAGTCCGCAAAAACGGA ACCCTCGATTTCCTTCGCCCCGACTCCAAATCGCAGGTTTCCATCCAGTATGTCGACGACAGGCCGGTCCGGGTCGACAC GGTGGTCATCTCCTCCCAGCACACGCCGGAAGTCTCCTATGAAACCATCAAGGAAGGGATCATCGAGGAGGTCGTCAAGA AGATCATCCCCGTGGAGCTCATGGACGACAAGACCCGCTTCCTCATCAACCCCACCGGCCGGTTCGTGATCGGTGGTCCC ATGGGCGACTGCGGCCTCACGGGTCGCAAGATCATCGTCGACAGCTACGGCGGTCACGGTGCCCACGGCGGCGGCGCCTT CTCGGGTAAGGATCCTTCCAAAGTCGACCGGTCAGCTGCCTACATGGGGCGTTACGTGGCCAAGAACCTGGTTGCGGCAG GGCTGTGCGAGCGCTGCGAAGTTCAGGTCGCCTATGCCATCGGCGTGGCCGAGCCCGTGTCGGTCATGGTCGACACTGCG GGTACCGGCAAAATTCCGTCCGCACGAATCGCGGAGATCATCCGTGAGGTTTTTGATCTGCGTCCCCGCGCCATCATCGA GCAGCTCGACCTGCTTCGCCCGATTTACCGCAAGACCGCGGCCTACGGCCATTTCGGCCGCGAACTCCCCGAATTCACCT GGGAGCGGACCGACAAGATCGATATCATCCGCCAGAAGGCTGGAATCTAA
Upstream 100 bases:
NA
Downstream 100 bases:
NA
Product: S-adenosylmethionine synthetase
Products: NA
Alternate protein names: AdoMet synthase; MAT; Methionine adenosyltransferase [H]
Number of amino acids: Translated: 389; Mature: 389
Protein sequence:
NA
Sequences:
>Translated_389_residues MEMKDYIFTSESVSEGHPDKVADQVSDAILDAILTQDKRARVACETLVTTGMAVIAGEITTTAVVDYPKVVRETIKEIGY NDSAMGFDWETCAVLVSIDKQSPDISQGVTEGEGMFKEQGAGDQGLMFGYACNETPELMPMTIMYSHRLTQKLAEVRKNG TLDFLRPDSKSQVSIQYVDDRPVRVDTVVISSQHTPEVSYETIKEGIIEEVVKKIIPVELMDDKTRFLINPTGRFVIGGP MGDCGLTGRKIIVDSYGGHGAHGGGAFSGKDPSKVDRSAAYMGRYVAKNLVAAGLCERCEVQVAYAIGVAEPVSVMVDTA GTGKIPSARIAEIIREVFDLRPRAIIEQLDLLRPIYRKTAAYGHFGRELPEFTWERTDKIDIIRQKAGI >Mature_389_residues MEMKDYIFTSESVSEGHPDKVADQVSDAILDAILTQDKRARVACETLVTTGMAVIAGEITTTAVVDYPKVVRETIKEIGY NDSAMGFDWETCAVLVSIDKQSPDISQGVTEGEGMFKEQGAGDQGLMFGYACNETPELMPMTIMYSHRLTQKLAEVRKNG TLDFLRPDSKSQVSIQYVDDRPVRVDTVVISSQHTPEVSYETIKEGIIEEVVKKIIPVELMDDKTRFLINPTGRFVIGGP MGDCGLTGRKIIVDSYGGHGAHGGGAFSGKDPSKVDRSAAYMGRYVAKNLVAAGLCERCEVQVAYAIGVAEPVSVMVDTA GTGKIPSARIAEIIREVFDLRPRAIIEQLDLLRPIYRKTAAYGHFGRELPEFTWERTDKIDIIRQKAGI
Specific function: Catalyzes the formation of S-adenosylmethionine from methionine and ATP. The overall synthetic reaction is composed of two sequential steps, AdoMet formation and the subsequent tripolyphosphate hydrolysis which occurs prior to release of AdoMet from the e
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasm [H]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the AdoMet synthase family [H]
Homologues:
Organism=Homo sapiens, GI5174529, Length=384, Percent_Identity=57.5520833333333, Blast_Score=436, Evalue=1e-122, Organism=Homo sapiens, GI4557737, Length=379, Percent_Identity=56.2005277044855, Blast_Score=426, Evalue=1e-119, Organism=Escherichia coli, GI1789311, Length=387, Percent_Identity=64.5994832041344, Blast_Score=531, Evalue=1e-152, Organism=Caenorhabditis elegans, GI17538494, Length=386, Percent_Identity=57.2538860103627, Blast_Score=439, Evalue=1e-124, Organism=Caenorhabditis elegans, GI17538498, Length=386, Percent_Identity=57.5129533678757, Blast_Score=439, Evalue=1e-123, Organism=Caenorhabditis elegans, GI25145633, Length=386, Percent_Identity=57.5129533678757, Blast_Score=437, Evalue=1e-123, Organism=Caenorhabditis elegans, GI17551082, Length=384, Percent_Identity=55.9895833333333, Blast_Score=425, Evalue=1e-119, Organism=Caenorhabditis elegans, GI32565905, Length=386, Percent_Identity=51.0362694300518, Blast_Score=371, Evalue=1e-103, Organism=Caenorhabditis elegans, GI32565911, Length=335, Percent_Identity=56.4179104477612, Blast_Score=369, Evalue=1e-102, Organism=Caenorhabditis elegans, GI25145635, Length=335, Percent_Identity=56.4179104477612, Blast_Score=367, Evalue=1e-102, Organism=Caenorhabditis elegans, GI32565903, Length=308, Percent_Identity=55.5194805194805, Blast_Score=332, Evalue=2e-91, Organism=Caenorhabditis elegans, GI32565909, Length=87, Percent_Identity=60.9195402298851, Blast_Score=116, Evalue=2e-26, Organism=Caenorhabditis elegans, GI32565907, Length=44, Percent_Identity=65.9090909090909, Blast_Score=68, Evalue=8e-12, Organism=Saccharomyces cerevisiae, GI6320710, Length=383, Percent_Identity=56.9190600522193, Blast_Score=445, Evalue=1e-126, Organism=Saccharomyces cerevisiae, GI6323209, Length=375, Percent_Identity=57.6, Blast_Score=443, Evalue=1e-125, Organism=Drosophila melanogaster, GI45552159, Length=381, Percent_Identity=56.4304461942257, Blast_Score=411, Evalue=1e-115, Organism=Drosophila melanogaster, GI24580529, Length=381, Percent_Identity=56.4304461942257, Blast_Score=411, Evalue=1e-115, Organism=Drosophila melanogaster, GI24580537, Length=381, Percent_Identity=56.4304461942257, Blast_Score=411, Evalue=1e-115, Organism=Drosophila melanogaster, GI24580533, Length=381, Percent_Identity=56.4304461942257, Blast_Score=411, Evalue=1e-115, Organism=Drosophila melanogaster, GI24580535, Length=381, Percent_Identity=56.4304461942257, Blast_Score=411, Evalue=1e-115, Organism=Drosophila melanogaster, GI24580531, Length=381, Percent_Identity=56.4304461942257, Blast_Score=411, Evalue=1e-115, Organism=Drosophila melanogaster, GI24580527, Length=384, Percent_Identity=55.9895833333333, Blast_Score=409, Evalue=1e-114, Organism=Drosophila melanogaster, GI24580525, Length=384, Percent_Identity=55.9895833333333, Blast_Score=409, Evalue=1e-114, Organism=Drosophila melanogaster, GI24580541, Length=368, Percent_Identity=55.4347826086957, Blast_Score=385, Evalue=1e-107, Organism=Drosophila melanogaster, GI24580539, Length=122, Percent_Identity=59.8360655737705, Blast_Score=150, Evalue=2e-36,
Paralogues:
None
Copy number: 7,000 Molecules/Cell In: Glucose minimal media [C]
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR022631 - InterPro: IPR022630 - InterPro: IPR022629 - InterPro: IPR022628 - InterPro: IPR002133 - InterPro: IPR022636 [H]
Pfam domain/function: PF02773 S-AdoMet_synt_C; PF02772 S-AdoMet_synt_M; PF00438 S-AdoMet_synt_N [H]
EC number: =2.5.1.6 [H]
Molecular weight: Translated: 42697; Mature: 42697
Theoretical pI: Translated: 4.93; Mature: 4.93
Prosite motif: PS00376 ADOMET_SYNTHETASE_1 ; PS00377 ADOMET_SYNTHETASE_2
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.5 %Cys (Translated Protein) 3.3 %Met (Translated Protein) 4.9 %Cys+Met (Translated Protein) 1.5 %Cys (Mature Protein) 3.3 %Met (Mature Protein) 4.9 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MEMKDYIFTSESVSEGHPDKVADQVSDAILDAILTQDKRARVACETLVTTGMAVIAGEIT CCCCHHEEECCCCCCCCCHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHCHHHHCCCHH TTAVVDYPKVVRETIKEIGYNDSAMGFDWETCAVLVSIDKQSPDISQGVTEGEGMFKEQG HHHHHCCHHHHHHHHHHCCCCCCCCCCCHHHEEEEEEECCCCCCHHHCCCCCCCCHHHCC AGDQGLMFGYACNETPELMPMTIMYSHRLTQKLAEVRKNGTLDFLRPDSKSQVSIQYVDD CCCCCEEEEEECCCCCCCCEEHHHHHHHHHHHHHHHHHCCCEEEECCCCCCEEEEEEECC RPVRVDTVVISSQHTPEVSYETIKEGIIEEVVKKIIPVELMDDKTRFLINPTGRFVIGGP CCEEEEEEEEECCCCCCCCHHHHHHHHHHHHHHHHCCEEEECCCCEEEECCCCCEEECCC MGDCGLTGRKIIVDSYGGHGAHGGGAFSGKDPSKVDRSAAYMGRYVAKNLVAAGLCERCE CCCCCCCCCEEEEECCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCC VQVAYAIGVAEPVSVMVDTAGTGKIPSARIAEIIREVFDLRPRAIIEQLDLLRPIYRKTA EEEEEEECCCCCCEEEEECCCCCCCCHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHH AYGHFGRELPEFTWERTDKIDIIRQKAGI HHHHHHHHHHHHHHCCCCHHHHHHHHCCC >Mature Secondary Structure MEMKDYIFTSESVSEGHPDKVADQVSDAILDAILTQDKRARVACETLVTTGMAVIAGEIT CCCCHHEEECCCCCCCCCHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHCHHHHCCCHH TTAVVDYPKVVRETIKEIGYNDSAMGFDWETCAVLVSIDKQSPDISQGVTEGEGMFKEQG HHHHHCCHHHHHHHHHHCCCCCCCCCCCHHHEEEEEEECCCCCCHHHCCCCCCCCHHHCC AGDQGLMFGYACNETPELMPMTIMYSHRLTQKLAEVRKNGTLDFLRPDSKSQVSIQYVDD CCCCCEEEEEECCCCCCCCEEHHHHHHHHHHHHHHHHHCCCEEEECCCCCCEEEEEEECC RPVRVDTVVISSQHTPEVSYETIKEGIIEEVVKKIIPVELMDDKTRFLINPTGRFVIGGP CCEEEEEEEEECCCCCCCCHHHHHHHHHHHHHHHHCCEEEECCCCEEEECCCCCEEECCC MGDCGLTGRKIIVDSYGGHGAHGGGAFSGKDPSKVDRSAAYMGRYVAKNLVAAGLCERCE CCCCCCCCCEEEEECCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCC VQVAYAIGVAEPVSVMVDTAGTGKIPSARIAEIIREVFDLRPRAIIEQLDLLRPIYRKTA EEEEEEECCCCCCEEEEECCCCCCCCHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHH AYGHFGRELPEFTWERTDKIDIIRQKAGI HHHHHHHHHHHHHHCCCCHHHHHHHHCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA