| Definition | Geobacter sulfurreducens PCA chromosome, complete genome. |
|---|---|
| Accession | NC_002939 |
| Length | 3,814,139 |
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The map label for this gene is livK [C]
Identifier: 39996834
GI number: 39996834
Start: 1900164
End: 1901300
Strand: Reverse
Name: livK [C]
Synonym: GSU1735
Alternate gene names: 39996834
Gene position: 1901300-1900164 (Counterclockwise)
Preceding gene: 39996835
Following gene: 39996833
Centisome position: 49.85
GC content: 56.64
Gene sequence:
>1137_bases ATGAACAGAATCTTCGCTGTTATCGTCGGTATCGTCGGTCTGTTGGTGGCCGGCATCGCCTCGGCAGCAGAACCGTTCAG GATCGGAGCGCTTTTTTCCATAACCGGTCCCGCGTCATTTCTGGGAGAGCCCGAGAAGAATACCCTGGAGATGCTGGTGA AGGACGCCAACGCCAGGGGTGGGATTGGCGGCCGCAAACTTGAGCTGGTGGTCTACGACACCCAGGGGGACGTGACCAAG GCGGTTCAACTGGCCAACAAACTGATCAAGAACGACAAAGTGAGTGTCATCGTCGGACCGAGTACCACCGGCGAAACCAT GGCGGTAATTCCCTTGGCGGAAAAGGAGAAAATCCCGCTCATTTCCTGCGCTGCGGGCATCAAGATTACCGATCCGGTCA AAAAGTGGGTATTCAAAACCCCGGCCAATGACCATGTGGCTGCCGAAAAGATCCTGATCCAGGCGGCCAGGCTGAAGCAG AAGTCTCTTGCCATTATCACCGTTTCCGACGGGTTCGGCTCCTCTGGGCGTGAACAGCTCAAGGCCCTGGCCGGCCAGAA GGGCTTCAGAATTGTGGCCGATGAGGTGTACGGTCCCAAGGACACCGACATGACCGCCCAACTCACCAAGATCAAGGCGG CCAAGCCCGACGCGGTCATCTGCTGGGGAACAAATCCCGGTCCTGCACTCATTGCCCGCAACATGAAACAACTCGGGATC AAGGTCCCGCTCTACATGAGCCACGGTGTGGCGTCCAAAAAGTTCATCGAACTGGCCGGGGCCGATGCCGCCGAAGGGAT TATGTTGCCGGCGGGCAAGCTTGCCATTTTCGACAAGCTCCCCAAGAACGATCCCCAGTACAAGTTGCTCAAATCGTATG ATGAATCCTATCGCAAGGCATACGGCGTGGAGGCTTCGACCTTCGGTGGTTACGCCTATGATTCCTTCCTCCTGATTTCC GGCGCCATGAAAAAGGGAACCTCTCCCCAGCAGATCAGGGACGGCCTTGAGCAGACCCGGAAGCTCGTCAGCGTCTCGGG GATTTTCACCATGTCCCCCTCGGATCATAACGGTCTGGATCTTTCGGCATTCGAGATGGTCCGCGTGACCAAAGGCGATT GGGAACTGATCAAATAA
Upstream 100 bases:
>100_bases TGAGACAGAGAAGGCCATCACAGCCCTTATCAACAACGGATTTACTGTCCTCGAGGGCGAACGCCTGTACGCAATGTAGC CACTTCAGGGAGGGGGGAGC
Downstream 100 bases:
>100_bases CTCATGGGGAGGGGTGTGATGCTGAAAAGAGGATCCTTTATCCTGACGCTCGCCGCATCGTTCATGATGCTGGCTGCCAA CGTATTTGCCGCGTCACCCA
Product: branched-chain amino acid ABC transporter periplasmic amino acid-binding protein
Products: ADP; phosphate; L-leucine [Cytoplasm] [C]
Alternate protein names: NA
Number of amino acids: Translated: 378; Mature: 378
Protein sequence:
>378_residues MNRIFAVIVGIVGLLVAGIASAAEPFRIGALFSITGPASFLGEPEKNTLEMLVKDANARGGIGGRKLELVVYDTQGDVTK AVQLANKLIKNDKVSVIVGPSTTGETMAVIPLAEKEKIPLISCAAGIKITDPVKKWVFKTPANDHVAAEKILIQAARLKQ KSLAIITVSDGFGSSGREQLKALAGQKGFRIVADEVYGPKDTDMTAQLTKIKAAKPDAVICWGTNPGPALIARNMKQLGI KVPLYMSHGVASKKFIELAGADAAEGIMLPAGKLAIFDKLPKNDPQYKLLKSYDESYRKAYGVEASTFGGYAYDSFLLIS GAMKKGTSPQQIRDGLEQTRKLVSVSGIFTMSPSDHNGLDLSAFEMVRVTKGDWELIK
Sequences:
>Translated_378_residues MNRIFAVIVGIVGLLVAGIASAAEPFRIGALFSITGPASFLGEPEKNTLEMLVKDANARGGIGGRKLELVVYDTQGDVTK AVQLANKLIKNDKVSVIVGPSTTGETMAVIPLAEKEKIPLISCAAGIKITDPVKKWVFKTPANDHVAAEKILIQAARLKQ KSLAIITVSDGFGSSGREQLKALAGQKGFRIVADEVYGPKDTDMTAQLTKIKAAKPDAVICWGTNPGPALIARNMKQLGI KVPLYMSHGVASKKFIELAGADAAEGIMLPAGKLAIFDKLPKNDPQYKLLKSYDESYRKAYGVEASTFGGYAYDSFLLIS GAMKKGTSPQQIRDGLEQTRKLVSVSGIFTMSPSDHNGLDLSAFEMVRVTKGDWELIK >Mature_378_residues MNRIFAVIVGIVGLLVAGIASAAEPFRIGALFSITGPASFLGEPEKNTLEMLVKDANARGGIGGRKLELVVYDTQGDVTK AVQLANKLIKNDKVSVIVGPSTTGETMAVIPLAEKEKIPLISCAAGIKITDPVKKWVFKTPANDHVAAEKILIQAARLKQ KSLAIITVSDGFGSSGREQLKALAGQKGFRIVADEVYGPKDTDMTAQLTKIKAAKPDAVICWGTNPGPALIARNMKQLGI KVPLYMSHGVASKKFIELAGADAAEGIMLPAGKLAIFDKLPKNDPQYKLLKSYDESYRKAYGVEASTFGGYAYDSFLLIS GAMKKGTSPQQIRDGLEQTRKLVSVSGIFTMSPSDHNGLDLSAFEMVRVTKGDWELIK
Specific function: Component of an amino-acid transport system (Potential) [H]
COG id: NA
COG function: NA
Gene ontology:
Cell location: Periplasmic Protein [C]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the leucine-binding protein family [H]
Homologues:
Organism=Escherichia coli, GI48994941, Length=285, Percent_Identity=26.3157894736842, Blast_Score=84, Evalue=1e-17, Organism=Escherichia coli, GI1789867, Length=288, Percent_Identity=28.4722222222222, Blast_Score=81, Evalue=1e-16,
Paralogues:
None
Copy number: 240 Molecules/Cell In: Growth Phase, Minimal Media (Based on E. coli). [C]
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR001828 [H]
Pfam domain/function: PF01094 ANF_receptor [H]
EC number: NA
Molecular weight: Translated: 40440; Mature: 40440
Theoretical pI: Translated: 9.93; Mature: 9.93
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.5 %Cys (Translated Protein) 2.6 %Met (Translated Protein) 3.2 %Cys+Met (Translated Protein) 0.5 %Cys (Mature Protein) 2.6 %Met (Mature Protein) 3.2 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MNRIFAVIVGIVGLLVAGIASAAEPFRIGALFSITGPASFLGEPEKNTLEMLVKDANARG CCHHHHHHHHHHHHHHHHHHHCCCCEEEEEEEEECCCHHHCCCCCHHHHHHHHCCCCCCC GIGGRKLELVVYDTQGDVTKAVQLANKLIKNDKVSVIVGPSTTGETMAVIPLAEKEKIPL CCCCEEEEEEEECCCCCHHHHHHHHHHHHCCCCEEEEECCCCCCCEEEEEEECCCCCCCE ISCAAGIKITDPVKKWVFKTPANDHVAAEKILIQAARLKQKSLAIITVSDGFGSSGREQL EEECCCCEECCHHHHHEECCCCCCHHHHHHHHHHHHHCCCCCEEEEEEECCCCCCHHHHH KALAGQKGFRIVADEVYGPKDTDMTAQLTKIKAAKPDAVICWGTNPGPALIARNMKQLGI HHHHCCCCCEEEEECCCCCCCCCCHHHHHEEECCCCCEEEEECCCCCHHHHHHHHHHCCC KVPLYMSHGVASKKFIELAGADAAEGIMLPAGKLAIFDKLPKNDPQYKLLKSYDESYRKA EEEEEECCCCCHHHHHEECCCCCCCCEECCCCCEEEECCCCCCCCHHHHHHHHHHHHHHH YGVEASTFGGYAYDSFLLISGAMKKGTSPQQIRDGLEQTRKLVSVSGIFTMSPSDHNGLD HCCCCCCCCCHHHHHHHEEEHHHHCCCCHHHHHHHHHHHHHHHEECEEEEECCCCCCCCC LSAFEMVRVTKGDWELIK HHHEEEEEEECCCEEECC >Mature Secondary Structure MNRIFAVIVGIVGLLVAGIASAAEPFRIGALFSITGPASFLGEPEKNTLEMLVKDANARG CCHHHHHHHHHHHHHHHHHHHCCCCEEEEEEEEECCCHHHCCCCCHHHHHHHHCCCCCCC GIGGRKLELVVYDTQGDVTKAVQLANKLIKNDKVSVIVGPSTTGETMAVIPLAEKEKIPL CCCCEEEEEEEECCCCCHHHHHHHHHHHHCCCCEEEEECCCCCCCEEEEEEECCCCCCCE ISCAAGIKITDPVKKWVFKTPANDHVAAEKILIQAARLKQKSLAIITVSDGFGSSGREQL EEECCCCEECCHHHHHEECCCCCCHHHHHHHHHHHHHCCCCCEEEEEEECCCCCCHHHHH KALAGQKGFRIVADEVYGPKDTDMTAQLTKIKAAKPDAVICWGTNPGPALIARNMKQLGI HHHHCCCCCEEEEECCCCCCCCCCHHHHHEEECCCCCEEEEECCCCCHHHHHHHHHHCCC KVPLYMSHGVASKKFIELAGADAAEGIMLPAGKLAIFDKLPKNDPQYKLLKSYDESYRKA EEEEEECCCCCHHHHHEECCCCCCCCEECCCCCEEEECCCCCCCCHHHHHHHHHHHHHHH YGVEASTFGGYAYDSFLLISGAMKKGTSPQQIRDGLEQTRKLVSVSGIFTMSPSDHNGLD HCCCCCCCCCHHHHHHHEEEHHHHCCCCHHHHHHHHHHHHHHHEECEEEEECCCCCCCCC LSAFEMVRVTKGDWELIK HHHEEEEEEECCCEEECC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: ATP; L-leucine [Periplasm]; H2O [C]
Specific reaction: ATP + L-leucine [Periplasm] + H2O = ADP + phosphate + L-leucine [Cytoplasm] [C]
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA