| Definition | Geobacter sulfurreducens PCA chromosome, complete genome. |
|---|---|
| Accession | NC_002939 |
| Length | 3,814,139 |
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The map label for this gene is livK [C]
Identifier: 39996833
GI number: 39996833
Start: 1899003
End: 1900145
Strand: Reverse
Name: livK [C]
Synonym: GSU1734
Alternate gene names: 39996833
Gene position: 1900145-1899003 (Counterclockwise)
Preceding gene: 39996834
Following gene: 39996832
Centisome position: 49.82
GC content: 59.76
Gene sequence:
>1143_bases ATGCTGAAAAGAGGATCCTTTATCCTGACGCTCGCCGCATCGTTCATGATGCTGGCTGCCAACGTATTTGCCGCGTCACC CATCCGGATAGGCGCACTCTTCGCCGTAACCGGACCGGCGTCGTTCCTGGGGGAACCGGAACGTAACACCGCCCAGATGA TGGTCAACAAGATCAACGCCGCCGGCGGTATCAAGGGAAGAAAAGTCGAACTGATCGTCTATGACACGCAAGGCGACGCC ACCAAGGCCGTGCAGGCGGCCAACCGGCTCATCAAGGACGACAAGGTGGTTGCCATCATCGGCCCCAGCACGACCGGGGA CACCATGGCGGTCATCCCTATCGTGGAAAAGGCCCAGATTCCCCTCGTTTCCTGTGCTGCCGGCAGCAAGATCACCGAAC CGGTGAAAAAATGGGTCTTCAAGACTGCCCAGAACGACGGGCTTGCAGTGGCAAAGATCTATGAACAACTCAACCGCCTC AGGATGAGCAAAGTGGCGATCCTGACGGTATCCGACGGGTTCGGCTCTTCCGGGCGCGAGCAACTCAAGGCCCAGGCGGC GCAACACGGCATCCAGATCGTTTCCGATGACACGTATGGGCCCAAGGACACGGATATGACGGCGCAGCTTACCAAGATCC GCAGCAGCGGCGCCCAGGCCGTGATCTGCTGGGGCACCAACCCCGGCCCTGCCGTCATTGCCCGCAACGCCAAGCAACTC GGGCTCGCCATTCCCATCTACATGAGTCATGGCGTGTCATCCAAGAAGTTCATCGAGCTTGCCGGCGATGCAGCCGAAGG AATCATTCTGCCGTCGGGCCGGGTCATCGTCGCCGACCTGCTTCCCGCCGCGGACAAGCAGAAGAAGTCGCTCATGGCAT ACGTCAAGGATTACCAGAAGCAGTTCAAGGCCGAGGGTGACCATTTTGGCGGCCATGCCTGGGATGCGGTGATGTTGCTG AAAGGTGCCCTGGAGCGTGGGGGTGACAGGCCTGCCGCCATCCGCGACCAGTTGGAGAAGACCAGAAACTTCGCGGGTAT TGGAGGCATCTTCAACTACTCCGCCGCCGACCATGCCGGCCTCGGCAAGGATGCCTTCGTCCTCGTGACGATCCACAACA AGGACTTTGCTCTCGTCAAGTAA
Upstream 100 bases:
>100_bases CCCCTCGGATCATAACGGTCTGGATCTTTCGGCATTCGAGATGGTCCGCGTGACCAAAGGCGATTGGGAACTGATCAAAT AACTCATGGGGAGGGGTGTG
Downstream 100 bases:
>100_bases GGTCCTTGCCGCACCATTGCGATCGAACCTTGGGAGCGCAGGCTGTCCCGGCCGCGCTCCCTCATTGTGAACCGGATGTA TACAGCATGAATTTAGGCCA
Product: branched-chain amino acid ABC transporter periplasmic amino acid-binding protein
Products: ADP; phosphate; L-leucine [Cytoplasm] [C]
Alternate protein names: NA
Number of amino acids: Translated: 380; Mature: 380
Protein sequence:
>380_residues MLKRGSFILTLAASFMMLAANVFAASPIRIGALFAVTGPASFLGEPERNTAQMMVNKINAAGGIKGRKVELIVYDTQGDA TKAVQAANRLIKDDKVVAIIGPSTTGDTMAVIPIVEKAQIPLVSCAAGSKITEPVKKWVFKTAQNDGLAVAKIYEQLNRL RMSKVAILTVSDGFGSSGREQLKAQAAQHGIQIVSDDTYGPKDTDMTAQLTKIRSSGAQAVICWGTNPGPAVIARNAKQL GLAIPIYMSHGVSSKKFIELAGDAAEGIILPSGRVIVADLLPAADKQKKSLMAYVKDYQKQFKAEGDHFGGHAWDAVMLL KGALERGGDRPAAIRDQLEKTRNFAGIGGIFNYSAADHAGLGKDAFVLVTIHNKDFALVK
Sequences:
>Translated_380_residues MLKRGSFILTLAASFMMLAANVFAASPIRIGALFAVTGPASFLGEPERNTAQMMVNKINAAGGIKGRKVELIVYDTQGDA TKAVQAANRLIKDDKVVAIIGPSTTGDTMAVIPIVEKAQIPLVSCAAGSKITEPVKKWVFKTAQNDGLAVAKIYEQLNRL RMSKVAILTVSDGFGSSGREQLKAQAAQHGIQIVSDDTYGPKDTDMTAQLTKIRSSGAQAVICWGTNPGPAVIARNAKQL GLAIPIYMSHGVSSKKFIELAGDAAEGIILPSGRVIVADLLPAADKQKKSLMAYVKDYQKQFKAEGDHFGGHAWDAVMLL KGALERGGDRPAAIRDQLEKTRNFAGIGGIFNYSAADHAGLGKDAFVLVTIHNKDFALVK >Mature_380_residues MLKRGSFILTLAASFMMLAANVFAASPIRIGALFAVTGPASFLGEPERNTAQMMVNKINAAGGIKGRKVELIVYDTQGDA TKAVQAANRLIKDDKVVAIIGPSTTGDTMAVIPIVEKAQIPLVSCAAGSKITEPVKKWVFKTAQNDGLAVAKIYEQLNRL RMSKVAILTVSDGFGSSGREQLKAQAAQHGIQIVSDDTYGPKDTDMTAQLTKIRSSGAQAVICWGTNPGPAVIARNAKQL GLAIPIYMSHGVSSKKFIELAGDAAEGIILPSGRVIVADLLPAADKQKKSLMAYVKDYQKQFKAEGDHFGGHAWDAVMLL KGALERGGDRPAAIRDQLEKTRNFAGIGGIFNYSAADHAGLGKDAFVLVTIHNKDFALVK
Specific function: Component of an amino-acid transport system (Potential) [H]
COG id: NA
COG function: NA
Gene ontology:
Cell location: Periplasmic Protein [C]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the leucine-binding protein family [H]
Homologues:
Organism=Escherichia coli, GI1789867, Length=343, Percent_Identity=27.6967930029155, Blast_Score=82, Evalue=8e-17, Organism=Escherichia coli, GI48994941, Length=269, Percent_Identity=25.2788104089219, Blast_Score=79, Evalue=5e-16,
Paralogues:
None
Copy number: 240 Molecules/Cell In: Growth Phase, Minimal Media (Based on E. coli). [C]
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR001828 - InterPro: IPR000709 [H]
Pfam domain/function: PF01094 ANF_receptor [H]
EC number: NA
Molecular weight: Translated: 40363; Mature: 40363
Theoretical pI: Translated: 10.13; Mature: 10.13
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.5 %Cys (Translated Protein) 2.9 %Met (Translated Protein) 3.4 %Cys+Met (Translated Protein) 0.5 %Cys (Mature Protein) 2.9 %Met (Mature Protein) 3.4 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MLKRGSFILTLAASFMMLAANVFAASPIRIGALFAVTGPASFLGEPERNTAQMMVNKINA CCCCCCCHHHHHHHHHHHHHHHHHCCCEEEEEEEEECCCHHHCCCCCCCHHHHHHHHHHH AGGIKGRKVELIVYDTQGDATKAVQAANRLIKDDKVVAIIGPSTTGDTMAVIPIVEKAQI CCCCCCCEEEEEEEECCCCHHHHHHHHHHHHCCCCEEEEECCCCCCCCEEEEEEECCCCC PLVSCAAGSKITEPVKKWVFKTAQNDGLAVAKIYEQLNRLRMSKVAILTVSDGFGSSGRE CEEEECCCCHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHCEEEEEEEECCCCCCHHH QLKAQAAQHGIQIVSDDTYGPKDTDMTAQLTKIRSSGAQAVICWGTNPGPAVIARNAKQL HHHHHHHHCCCEEEECCCCCCCCCCHHHHHHHHHCCCCCEEEEECCCCCCEEEECCHHHC GLAIPIYMSHGVSSKKFIELAGDAAEGIILPSGRVIVADLLPAADKQKKSLMAYVKDYQK CEEEEEEECCCCCCCCEEEECCCCCCCEECCCCCEEEEECCCCCCHHHHHHHHHHHHHHH QFKAEGDHFGGHAWDAVMLLKGALERGGDRPAAIRDQLEKTRNFAGIGGIFNYSAADHAG HHHCCCCCCCCHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHCCCCCCCEEECCCCCCCC LGKDAFVLVTIHNKDFALVK CCCCEEEEEEEECCCEEEEC >Mature Secondary Structure MLKRGSFILTLAASFMMLAANVFAASPIRIGALFAVTGPASFLGEPERNTAQMMVNKINA CCCCCCCHHHHHHHHHHHHHHHHHCCCEEEEEEEEECCCHHHCCCCCCCHHHHHHHHHHH AGGIKGRKVELIVYDTQGDATKAVQAANRLIKDDKVVAIIGPSTTGDTMAVIPIVEKAQI CCCCCCCEEEEEEEECCCCHHHHHHHHHHHHCCCCEEEEECCCCCCCCEEEEEEECCCCC PLVSCAAGSKITEPVKKWVFKTAQNDGLAVAKIYEQLNRLRMSKVAILTVSDGFGSSGRE CEEEECCCCHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHCEEEEEEEECCCCCCHHH QLKAQAAQHGIQIVSDDTYGPKDTDMTAQLTKIRSSGAQAVICWGTNPGPAVIARNAKQL HHHHHHHHCCCEEEECCCCCCCCCCHHHHHHHHHCCCCCEEEEECCCCCCEEEECCHHHC GLAIPIYMSHGVSSKKFIELAGDAAEGIILPSGRVIVADLLPAADKQKKSLMAYVKDYQK CEEEEEEECCCCCCCCEEEECCCCCCCEECCCCCEEEEECCCCCCHHHHHHHHHHHHHHH QFKAEGDHFGGHAWDAVMLLKGALERGGDRPAAIRDQLEKTRNFAGIGGIFNYSAADHAG HHHCCCCCCCCHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHCCCCCCCEEECCCCCCCC LGKDAFVLVTIHNKDFALVK CCCCEEEEEEEECCCEEEEC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: ATP; L-leucine [Periplasm]; H2O [C]
Specific reaction: ATP + L-leucine [Periplasm] + H2O = ADP + phosphate + L-leucine [Cytoplasm] [C]
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: 11756688 [H]