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The map label for this gene is nusB

Identifier: 39996792

GI number: 39996792

Start: 1850731

End: 1851147

Strand: Direct

Name: nusB

Synonym: GSU1692

Alternate gene names: 39996792

Gene position: 1850731-1851147 (Clockwise)

Preceding gene: 39996791

Following gene: 39996793

Centisome position: 48.52

GC content: 60.67

Gene sequence:

>417_bases
GTGGGCGCCCGCCGCCTCGGCAGGGAATTGGCCCTGCAGATGCTGTACTCAAGGGACTATGCTGCCGGCGAAGCTGCGCC
GCTCCTTGAGCTCGTGCTGGACGAATCAGAGCCCGGAGCGGCGGCGGGGCGAAGCTTTGCCGACGACCTGGTCCGCGGAG
TTCTGGAGCACCGCCAGGAGATCGATACTGCCATCACCGGCGCATCGAAAAACTGGTCCATCGGCCGCATGGCCCGGGTC
GACCTGAGCATCCTGCGAATGGCCATGTATGAGTTGCTGTTCCGGTCCGATATTCCCAAGAACGTCACCATAAACGAAGC
CATCGAGGTGGCAAAGAAATTCGGTACCGAGGACTCGCCGGCTTTTATCAACGGCATTCTGGACGAAATCGCTTCAACGC
TCCCTGATAAGGGGTAG

Upstream 100 bases:

>100_bases
AGCAGGCAATCGAAAGGGCCGGAACCAAAGCTGGAAACAAGGGCTTCGATGCGGCAGTGACCGCCATCGAAACGGCGCGC
CTCTACCGGGAGCTCCGCTA

Downstream 100 bases:

>100_bases
CGGCCTCACTAATCCCGACAGGCACCAGAACGAGGAATCATGAAAGAGATCAAGATCGGACTCATCGGTTTCGGCACCAT
CGGCACGGGTGTCGCCAAGC

Product: N utilization substance protein B

Products: NA

Alternate protein names: Protein nusB

Number of amino acids: Translated: 138; Mature: 137

Protein sequence:

>138_residues
MGARRLGRELALQMLYSRDYAAGEAAPLLELVLDESEPGAAAGRSFADDLVRGVLEHRQEIDTAITGASKNWSIGRMARV
DLSILRMAMYELLFRSDIPKNVTINEAIEVAKKFGTEDSPAFINGILDEIASTLPDKG

Sequences:

>Translated_138_residues
MGARRLGRELALQMLYSRDYAAGEAAPLLELVLDESEPGAAAGRSFADDLVRGVLEHRQEIDTAITGASKNWSIGRMARV
DLSILRMAMYELLFRSDIPKNVTINEAIEVAKKFGTEDSPAFINGILDEIASTLPDKG
>Mature_137_residues
GARRLGRELALQMLYSRDYAAGEAAPLLELVLDESEPGAAAGRSFADDLVRGVLEHRQEIDTAITGASKNWSIGRMARVD
LSILRMAMYELLFRSDIPKNVTINEAIEVAKKFGTEDSPAFINGILDEIASTLPDKG

Specific function: Involved in the transcription termination process

COG id: COG0781

COG function: function code K; Transcription termination factor

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the nusB family

Homologues:

Organism=Escherichia coli, GI1786618, Length=62, Percent_Identity=53.2258064516129, Blast_Score=70, Evalue=3e-14,

Paralogues:

None

Copy number: 900 Molecules/Cell In: Glucose minimal media [C]

Swissprot (AC and ID): NUSB_GEOSL (Q74CI1)

Other databases:

- EMBL:   AE017180
- RefSeq:   NP_952743.1
- HSSP:   Q9X286
- ProteinModelPortal:   Q74CI1
- SMR:   Q74CI1
- GeneID:   2685421
- GenomeReviews:   AE017180_GR
- KEGG:   gsu:GSU1692
- NMPDR:   fig|243231.1.peg.1681
- TIGR:   GSU1692
- HOGENOM:   HBG734409
- OMA:   SDNSSRF
- ProtClustDB:   CLSK828489
- BioCyc:   GSUL243231:GSU_1692-MONOMER
- HAMAP:   MF_00073
- InterPro:   IPR011605
- InterPro:   IPR006027
- Gene3D:   G3DSA:1.10.940.10
- TIGRFAMs:   TIGR01951

Pfam domain/function: PF01029 NusB; SSF48013 NusB_RsmB_TIM44

EC number: NA

Molecular weight: Translated: 15066; Mature: 14935

Theoretical pI: Translated: 4.56; Mature: 4.56

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
3.6 %Met     (Translated Protein)
3.6 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
2.9 %Met     (Mature Protein)
2.9 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MGARRLGRELALQMLYSRDYAAGEAAPLLELVLDESEPGAAAGRSFADDLVRGVLEHRQE
CCHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHCCCCCCCHHCHHHHHHHHHHHHHHHHH
IDTAITGASKNWSIGRMARVDLSILRMAMYELLFRSDIPKNVTINEAIEVAKKFGTEDSP
HHHHHCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHCCCCCH
AFINGILDEIASTLPDKG
HHHHHHHHHHHHHCCCCC
>Mature Secondary Structure 
GARRLGRELALQMLYSRDYAAGEAAPLLELVLDESEPGAAAGRSFADDLVRGVLEHRQE
CHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHCCCCCCCHHCHHHHHHHHHHHHHHHHH
IDTAITGASKNWSIGRMARVDLSILRMAMYELLFRSDIPKNVTINEAIEVAKKFGTEDSP
HHHHHCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHCCCCCH
AFINGILDEIASTLPDKG
HHHHHHHHHHHHHCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA