| Definition | Geobacter sulfurreducens PCA chromosome, complete genome. |
|---|---|
| Accession | NC_002939 |
| Length | 3,814,139 |
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The map label for this gene is zraS [C]
Identifier: 39996755
GI number: 39996755
Start: 1813112
End: 1815586
Strand: Reverse
Name: zraS [C]
Synonym: GSU1655
Alternate gene names: 39996755
Gene position: 1815586-1813112 (Counterclockwise)
Preceding gene: 39996756
Following gene: 39996754
Centisome position: 47.6
GC content: 56.4
Gene sequence:
>2475_bases ATGGAGTTGCCACCTCTTCGCGTGGTGATCGTTGATGACTCTTCCCTGGATGCCGAGCTGATCCTCAGGGAACTTAATCG CAGCTTTGCGACCGAATTCGTGCGCGTGGACACCCCCAGCGGCATGAGCTCCGTGATTGAGGCTGAGCCATGGGACGTAA TAGTCTCCGACTATTTCATGCCCCAGTTTAGCGGACTTGATGCCATTGCCCTGCTGAAGAAACTCAACAAGGATATCCCG ATCATCATCGTCTCCGGCAAGCTGGGTGAAGATTCGGCGGTTGAGACCATGCGCGCCGGGGCAAGCGACTACATACTCAA AGACAACCTTGCCCGCCTGGTGCCGGCCATACACCGGGAACTAAATGAATTGTCGGTCCGCCGGCAGAAAAGGCGGGCAG AAGAAGAGCTCCGCAAGCTTTACCACGCCGTTGAACAGAGCCCTGTTTCAATTGTCATTACTGATCGGGAAGGCACCATC GAATATGTTAACCCGAAATTCAGCAAACTGACCGGATATGATTCCCACGAGGCCATTGGTCAGAATCCCCGCATCTTAAA ATCGGGAGAAACCCCGGCAGAGGAATACCAACGCCTCTGGCAATCCATCAAGGCAGGGCACGAATGGCACGGTGAATTCC TCAACAAAAAGAAAAACGGCCAACTTTTCTGGGAGCGGGCCTCCATTTCCGCCATAAAAGACGAAACCGGCACAATCACT CATTTCGTCGGCATCAAGGAGGACATCACGGAGCAACGCAGGACCAAGGAAGCGGAACTCCGCAGCTGGAAGCTCTCCGA GGCCATGGCGTCTGCGAGCCTCTGCTTCCTGGAAACCGAAAACATCAGCAAGATGGCCCAGATACTGGTTGACCGCTGCG TAGAGATCACCAATGCGTCCTTCGGCTTTTTGTACGAACTGGTGTTCGGCGGCGACGCACGTATTCTCGCCGTCTCGTCC ACGGCGGCCGTGCCTGCCGGTGGACTCTGTGCCCAGGTAAAGGGACATATCGAGCGTGAAGGTTTTTTTCTCGTCACCCC TAGTGACGGCCTCCTGTTTGAGCCGGTCAAGGCCGGCACGACGGTTCTCACCAACAACCCCACAACCCTGGATCATCTCA TTTGCCGCGACAGCGGGAACCTCGGCCAGATCAATTCCTTTCTCGGCACCCCGCTCAAGGTGGGCAGCCGGGTCGTCGGT ATGATCGGGCTCACTGACCGGCCGGATGGCTTTACTGACATGGAGCGCCGGGAAATCGAGGCATTCGCCCAGACTGCAGC GCTTGCACTCCATAGCGCCAGGGCTGAGATCGAGCATAAAAAGGCCATGGATCAGCTTCGCCAAGCGCAAAAAATGGAGG CGATCGGCCAGCTCGCCGGCGGGATTGCCCATGACTTTAACAACCTGCTGACGGTCATCAACGGGTACAGCACCCTCCTG ATCCATGAGATGCCCAACGACTCACCGTTCAAGGTTGAAGTCGAGCATATTCTCCAAGCCGGCGAGCGGGCGGCGGACCT CACTCATCAGCTCCTCGCCTTCAGCCGGCGCCAAATCCTCGAGCCCAAATACATCGACATCAATCTTCTTGTGAAAAACG TCGAAAAGATGCTGAAACGGCTCATACGAGAGAATATCATCCTCACGACCCGCCTTGCCGAACAGCTTGGGACCGTAAAG GCAGATCCGGGCCAGGTCGAGCAGATCATCATGAACCTTGTGGTCAATGCCCGCGACGCCATGGAGGAGGGAGGCATTCT TACAATAGAAACAGCGAATGTGGAGCTGGACGGCGCATTCGCCCTGAACAATCCCGGGGCAGTCCCGGGGCGCTACATCA TGCTCACCGTAACAGATACCGGCATCGGCATGTCGGAGGAAGTGCGGCGCAAGGTTTTTGAACCGTTTTTCACTACCAAG GCTCAGGGCAAGGGAACCGGATTAGGCCTTGCGACGGTCTATGGTATCGTGAAGCAAAGCGACGGTTACATTCAGGTGTT GAGTCAGCCGGGTAAGGGATCATCGTTCCGGGTTTTTCTCCCGCGCGTCCAGGGCAAAAGCGAGGGGGACATCCTGCTGG ATGACGCGCCTGAGATGCTGGGGTCTGAATCGGTTCTTGTGGTCGAAGATGAGGAAGGTGTCCTCAATCTTGTGGTCCAC ACCCTCTCTGCCCGTGGCTACCGGGTGTTCAGTACGGCATCCCCCGTTGAAGCCATGGAGATATTCAGCCGCAACCGGGA GCGGATCTGCCTCCTTGTGACCGACGTGATCATGCCGGGGATGAGCGGCCCCCTCCTGGCAGAAAACCTCAGAGGGCAGC GAGAGGATCTCAAAATATTGTTCATGTCGGGGTATACTGATGATACCGCAATACCAAGCGAGGCGTCGGATGAACGGACT TCCTTCATCATGAAGCCGTTCACCCCCGATGCGCTGGCCGGAAAAGTTCGCGAATTGCTCGGCACTGTTTCGTGA
Upstream 100 bases:
>100_bases TACAAATGGATCGACAGTGCTAAACGTATCCTGATTTTTGCCGATGAGACATTAAGAAGCAGTCCATTCCGGGATTGTTC ACCGAAACGGAGCACGAATT
Downstream 100 bases:
>100_bases TTATACCGGCATACAGGAGGGAAACCACATGAAAGCCACAATCCTGACGGTCGACGATGAGGAGATGATCAGGGACCTGC TGGTGACGGCGCTGTCCCGC
Product: sensory box histidine kinase/response regulator
Products: NA
Alternate protein names: Blue-light-activated histidine kinase; Response regulator [H]
Number of amino acids: Translated: 824; Mature: 824
Protein sequence:
>824_residues MELPPLRVVIVDDSSLDAELILRELNRSFATEFVRVDTPSGMSSVIEAEPWDVIVSDYFMPQFSGLDAIALLKKLNKDIP IIIVSGKLGEDSAVETMRAGASDYILKDNLARLVPAIHRELNELSVRRQKRRAEEELRKLYHAVEQSPVSIVITDREGTI EYVNPKFSKLTGYDSHEAIGQNPRILKSGETPAEEYQRLWQSIKAGHEWHGEFLNKKKNGQLFWERASISAIKDETGTIT HFVGIKEDITEQRRTKEAELRSWKLSEAMASASLCFLETENISKMAQILVDRCVEITNASFGFLYELVFGGDARILAVSS TAAVPAGGLCAQVKGHIEREGFFLVTPSDGLLFEPVKAGTTVLTNNPTTLDHLICRDSGNLGQINSFLGTPLKVGSRVVG MIGLTDRPDGFTDMERREIEAFAQTAALALHSARAEIEHKKAMDQLRQAQKMEAIGQLAGGIAHDFNNLLTVINGYSTLL IHEMPNDSPFKVEVEHILQAGERAADLTHQLLAFSRRQILEPKYIDINLLVKNVEKMLKRLIRENIILTTRLAEQLGTVK ADPGQVEQIIMNLVVNARDAMEEGGILTIETANVELDGAFALNNPGAVPGRYIMLTVTDTGIGMSEEVRRKVFEPFFTTK AQGKGTGLGLATVYGIVKQSDGYIQVLSQPGKGSSFRVFLPRVQGKSEGDILLDDAPEMLGSESVLVVEDEEGVLNLVVH TLSARGYRVFSTASPVEAMEIFSRNRERICLLVTDVIMPGMSGPLLAENLRGQREDLKILFMSGYTDDTAIPSEASDERT SFIMKPFTPDALAGKVRELLGTVS
Sequences:
>Translated_824_residues MELPPLRVVIVDDSSLDAELILRELNRSFATEFVRVDTPSGMSSVIEAEPWDVIVSDYFMPQFSGLDAIALLKKLNKDIP IIIVSGKLGEDSAVETMRAGASDYILKDNLARLVPAIHRELNELSVRRQKRRAEEELRKLYHAVEQSPVSIVITDREGTI EYVNPKFSKLTGYDSHEAIGQNPRILKSGETPAEEYQRLWQSIKAGHEWHGEFLNKKKNGQLFWERASISAIKDETGTIT HFVGIKEDITEQRRTKEAELRSWKLSEAMASASLCFLETENISKMAQILVDRCVEITNASFGFLYELVFGGDARILAVSS TAAVPAGGLCAQVKGHIEREGFFLVTPSDGLLFEPVKAGTTVLTNNPTTLDHLICRDSGNLGQINSFLGTPLKVGSRVVG MIGLTDRPDGFTDMERREIEAFAQTAALALHSARAEIEHKKAMDQLRQAQKMEAIGQLAGGIAHDFNNLLTVINGYSTLL IHEMPNDSPFKVEVEHILQAGERAADLTHQLLAFSRRQILEPKYIDINLLVKNVEKMLKRLIRENIILTTRLAEQLGTVK ADPGQVEQIIMNLVVNARDAMEEGGILTIETANVELDGAFALNNPGAVPGRYIMLTVTDTGIGMSEEVRRKVFEPFFTTK AQGKGTGLGLATVYGIVKQSDGYIQVLSQPGKGSSFRVFLPRVQGKSEGDILLDDAPEMLGSESVLVVEDEEGVLNLVVH TLSARGYRVFSTASPVEAMEIFSRNRERICLLVTDVIMPGMSGPLLAENLRGQREDLKILFMSGYTDDTAIPSEASDERT SFIMKPFTPDALAGKVRELLGTVS >Mature_824_residues MELPPLRVVIVDDSSLDAELILRELNRSFATEFVRVDTPSGMSSVIEAEPWDVIVSDYFMPQFSGLDAIALLKKLNKDIP IIIVSGKLGEDSAVETMRAGASDYILKDNLARLVPAIHRELNELSVRRQKRRAEEELRKLYHAVEQSPVSIVITDREGTI EYVNPKFSKLTGYDSHEAIGQNPRILKSGETPAEEYQRLWQSIKAGHEWHGEFLNKKKNGQLFWERASISAIKDETGTIT HFVGIKEDITEQRRTKEAELRSWKLSEAMASASLCFLETENISKMAQILVDRCVEITNASFGFLYELVFGGDARILAVSS TAAVPAGGLCAQVKGHIEREGFFLVTPSDGLLFEPVKAGTTVLTNNPTTLDHLICRDSGNLGQINSFLGTPLKVGSRVVG MIGLTDRPDGFTDMERREIEAFAQTAALALHSARAEIEHKKAMDQLRQAQKMEAIGQLAGGIAHDFNNLLTVINGYSTLL IHEMPNDSPFKVEVEHILQAGERAADLTHQLLAFSRRQILEPKYIDINLLVKNVEKMLKRLIRENIILTTRLAEQLGTVK ADPGQVEQIIMNLVVNARDAMEEGGILTIETANVELDGAFALNNPGAVPGRYIMLTVTDTGIGMSEEVRRKVFEPFFTTK AQGKGTGLGLATVYGIVKQSDGYIQVLSQPGKGSSFRVFLPRVQGKSEGDILLDDAPEMLGSESVLVVEDEEGVLNLVVH TLSARGYRVFSTASPVEAMEIFSRNRERICLLVTDVIMPGMSGPLLAENLRGQREDLKILFMSGYTDDTAIPSEASDERT SFIMKPFTPDALAGKVRELLGTVS
Specific function: Photosensitive kinase and response regulator that is involved in increased bacterial virulence upon exposure to light [H]
COG id: NA
COG function: NA
Gene ontology:
Cell location: Integral Membrane Protein. Inner Membrane [C]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Contains 1 response regulatory domain [H]
Homologues:
Organism=Escherichia coli, GI1790436, Length=239, Percent_Identity=29.7071129707113, Blast_Score=117, Evalue=3e-27, Organism=Escherichia coli, GI1788549, Length=251, Percent_Identity=29.0836653386454, Blast_Score=107, Evalue=4e-24, Organism=Escherichia coli, GI1788713, Length=313, Percent_Identity=28.4345047923323, Blast_Score=94, Evalue=3e-20, Organism=Escherichia coli, GI1790300, Length=258, Percent_Identity=27.5193798449612, Blast_Score=75, Evalue=2e-14, Organism=Escherichia coli, GI87081816, Length=399, Percent_Identity=22.8070175438596, Blast_Score=75, Evalue=2e-14, Organism=Escherichia coli, GI48994928, Length=364, Percent_Identity=27.1978021978022, Blast_Score=71, Evalue=3e-13, Organism=Escherichia coli, GI1786912, Length=301, Percent_Identity=25.5813953488372, Blast_Score=69, Evalue=9e-13, Organism=Escherichia coli, GI145693157, Length=127, Percent_Identity=32.2834645669291, Blast_Score=66, Evalue=1e-11,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR003594 - InterPro: IPR011006 - InterPro: IPR001610 - InterPro: IPR000014 - InterPro: IPR000700 - InterPro: IPR013767 - InterPro: IPR004358 - InterPro: IPR003661 - InterPro: IPR005467 - InterPro: IPR009082 - InterPro: IPR001789 [H]
Pfam domain/function: PF02518 HATPase_c; PF00512 HisKA; PF00989 PAS; PF00072 Response_reg [H]
EC number: =2.7.13.3 [H]
Molecular weight: Translated: 90925; Mature: 90925
Theoretical pI: Translated: 5.03; Mature: 5.03
Prosite motif: PS50112 PAS ; PS50113 PAC ; PS50110 RESPONSE_REGULATORY ; PS50109 HIS_KIN
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.6 %Cys (Translated Protein) 2.7 %Met (Translated Protein) 3.3 %Cys+Met (Translated Protein) 0.6 %Cys (Mature Protein) 2.7 %Met (Mature Protein) 3.3 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MELPPLRVVIVDDSSLDAELILRELNRSFATEFVRVDTPSGMSSVIEAEPWDVIVSDYFM CCCCCEEEEEECCCCCCHHHHHHHHHHHHHHHEEEECCCCCHHHHHCCCCCEEEEHHHCC PQFSGLDAIALLKKLNKDIPIIIVSGKLGEDSAVETMRAGASDYILKDNLARLVPAIHRE CCCCCCHHHHHHHHHCCCCCEEEEECCCCCCHHHHHHHCCCCCCHHHHHHHHHHHHHHHH LNELSVRRQKRRAEEELRKLYHAVEQSPVSIVITDREGTIEYVNPKFSKLTGYDSHEAIG HHHHHHHHHHHHHHHHHHHHHHHHCCCCEEEEEECCCCCEEECCCCHHHHCCCCCHHHCC QNPRILKSGETPAEEYQRLWQSIKAGHEWHGEFLNKKKNGQLFWERASISAIKDETGTIT CCCCEEECCCCCHHHHHHHHHHHHCCHHHHHHHHCCCCCCCEEEEECCHHHHCCCCCCEE HFVGIKEDITEQRRTKEAELRSWKLSEAMASASLCFLETENISKMAQILVDRCVEITNAS EEECCHHHHHHHHHHHHHHHHHHHHHHHHHHCCEEEEECCCHHHHHHHHHHHHHHHCCCC FGFLYELVFGGDARILAVSSTAAVPAGGLCAQVKGHIEREGFFLVTPSDGLLFEPVKAGT HHHHHHEEECCCEEEEEEECCCCCCCCCHHHHHHCCCCCCCEEEEECCCCCEEEECCCCC TVLTNNPTTLDHLICRDSGNLGQINSFLGTPLKVGSRVVGMIGLTDRPDGFTDMERREIE EEEECCCCHHHHEEECCCCCCCHHHHHHCCCHHHCCCEEEEEECCCCCCCCCHHHHHHHH AFAQTAALALHSARAEIEHKKAMDQLRQAQKMEAIGQLAGGIAHDFNNLLTVINGYSTLL HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCEEEE IHEMPNDSPFKVEVEHILQAGERAADLTHQLLAFSRRQILEPKYIDINLLVKNVEKMLKR EEECCCCCCCEEEHHHHHHCCHHHHHHHHHHHHHHHHHHCCCCEEEHHHHHHHHHHHHHH LIRENIILTTRLAEQLGTVKADPGQVEQIIMNLVVNARDAMEEGGILTIETANVELDGAF HHHCCCEEHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHHCCCEEEEEECCEEECCEE ALNNPGAVPGRYIMLTVTDTGIGMSEEVRRKVFEPFFTTKAQGKGTGLGLATVYGIVKQS EECCCCCCCCCEEEEEEECCCCCCHHHHHHHHHHHHHCCCCCCCCCCCHHHHHHHHHHCC DGYIQVLSQPGKGSSFRVFLPRVQGKSEGDILLDDAPEMLGSESVLVVEDEEGVLNLVVH CCEEEEECCCCCCCEEEEEEEECCCCCCCCEEECCCHHHHCCCCEEEEECCCCHHHHHHH TLSARGYRVFSTASPVEAMEIFSRNRERICLLVTDVIMPGMSGPLLAENLRGQREDLKIL HHCCCCEEEEECCCCHHHHHHHHCCCCEEEEEEEHHHCCCCCCCHHHHHHCCCCCCEEEE FMSGYTDDTAIPSEASDERTSFIMKPFTPDALAGKVRELLGTVS EEECCCCCCCCCCCCCCCCCEEEECCCCCHHHHHHHHHHHHCCC >Mature Secondary Structure MELPPLRVVIVDDSSLDAELILRELNRSFATEFVRVDTPSGMSSVIEAEPWDVIVSDYFM CCCCCEEEEEECCCCCCHHHHHHHHHHHHHHHEEEECCCCCHHHHHCCCCCEEEEHHHCC PQFSGLDAIALLKKLNKDIPIIIVSGKLGEDSAVETMRAGASDYILKDNLARLVPAIHRE CCCCCCHHHHHHHHHCCCCCEEEEECCCCCCHHHHHHHCCCCCCHHHHHHHHHHHHHHHH LNELSVRRQKRRAEEELRKLYHAVEQSPVSIVITDREGTIEYVNPKFSKLTGYDSHEAIG HHHHHHHHHHHHHHHHHHHHHHHHCCCCEEEEEECCCCCEEECCCCHHHHCCCCCHHHCC QNPRILKSGETPAEEYQRLWQSIKAGHEWHGEFLNKKKNGQLFWERASISAIKDETGTIT CCCCEEECCCCCHHHHHHHHHHHHCCHHHHHHHHCCCCCCCEEEEECCHHHHCCCCCCEE HFVGIKEDITEQRRTKEAELRSWKLSEAMASASLCFLETENISKMAQILVDRCVEITNAS EEECCHHHHHHHHHHHHHHHHHHHHHHHHHHCCEEEEECCCHHHHHHHHHHHHHHHCCCC FGFLYELVFGGDARILAVSSTAAVPAGGLCAQVKGHIEREGFFLVTPSDGLLFEPVKAGT HHHHHHEEECCCEEEEEEECCCCCCCCCHHHHHHCCCCCCCEEEEECCCCCEEEECCCCC TVLTNNPTTLDHLICRDSGNLGQINSFLGTPLKVGSRVVGMIGLTDRPDGFTDMERREIE EEEECCCCHHHHEEECCCCCCCHHHHHHCCCHHHCCCEEEEEECCCCCCCCCHHHHHHHH AFAQTAALALHSARAEIEHKKAMDQLRQAQKMEAIGQLAGGIAHDFNNLLTVINGYSTLL HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCEEEE IHEMPNDSPFKVEVEHILQAGERAADLTHQLLAFSRRQILEPKYIDINLLVKNVEKMLKR EEECCCCCCCEEEHHHHHHCCHHHHHHHHHHHHHHHHHHCCCCEEEHHHHHHHHHHHHHH LIRENIILTTRLAEQLGTVKADPGQVEQIIMNLVVNARDAMEEGGILTIETANVELDGAF HHHCCCEEHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHHCCCEEEEEECCEEECCEE ALNNPGAVPGRYIMLTVTDTGIGMSEEVRRKVFEPFFTTKAQGKGTGLGLATVYGIVKQS EECCCCCCCCCEEEEEEECCCCCCHHHHHHHHHHHHHCCCCCCCCCCCHHHHHHHHHHCC DGYIQVLSQPGKGSSFRVFLPRVQGKSEGDILLDDAPEMLGSESVLVVEDEEGVLNLVVH CCEEEEECCCCCCCEEEEEEEECCCCCCCCEEECCCHHHHCCCCEEEEECCCCHHHHHHH TLSARGYRVFSTASPVEAMEIFSRNRERICLLVTDVIMPGMSGPLLAENLRGQREDLKIL HHCCCCEEEEECCCCHHHHHHHHCCCCEEEEEEEHHHCCCCCCCHHHHHHCCCCCCEEEE FMSGYTDDTAIPSEASDERTSFIMKPFTPDALAGKVRELLGTVS EEECCCCCCCCCCCCCCCCCEEEECCCCCHHHHHHHHHHHHCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 6.0
TargetDB status: NA
Availability: NA
References: NA