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The map label for this gene is 39996640

Identifier: 39996640

GI number: 39996640

Start: 1694228

End: 1695442

Strand: Direct

Name: 39996640

Synonym: GSU1540

Alternate gene names: NA

Gene position: 1694228-1695442 (Clockwise)

Preceding gene: 39996639

Following gene: 39996641

Centisome position: 44.42

GC content: 42.72

Gene sequence:

>1215_bases
ATGAATCGATATTTTTTTAGAATGTGTTGTAGTCTCTTCATATGCATGCTGGTATCGAGTTGTGGAGGGCAGAATGAGGG
CAATCAACAACCGCGAAATACTCAATTACAATTCTCCGCTGGCATAGGCTATCCGGTGCCTGCAACCGCTTTTACAAATG
CATTCGGCGATATTGCTACTGGTGACTTGAATGGTGATGGCCGAAACGATGTTGCGGTAATTGAGGCAAATGGCAGTAAA
GGAATCCTTATTTATTGCCAGAATGCAATGGGCGCACTAAATGAGCCACTGATAATTGATTCATCGTTACAATTAAGTGG
AATCACCGTTGGCGATGTTAATAATGATGGTTTGTCAGATTTAGTGGTTAGTGGAGACGTACCAGGACTTCCAGAATTAC
GTGGCAGAACTAAGGTTTATATTCAGAATCGATCAACACATGCTCTCGATCCAGACCAGGAATATGCTCTTTCAACTGAT
ACAGCAGGAACCTTAGCTATAGCTGACCTAAATAGTGATGGTCGCAAGGATATTGTGGTAGCAAGTGTGCAGGGAAGTAA
TGGGCTGTTATCAATCTTTTTTCAAGAAACCGGTGGGCTAGGCGCTGAGCAAACCTACACCTCAGTTCCGGTTGTATATG
GAGGAGAGGTTCATGTTGCGGATATGAACAATGATGGACGCAATGATATCATCGTTCAAAGCGACCTAAAGCAATTGGCG
GTAATAAAGCAAAGTTCGCCGGGGATATTCAATGCAACACCCGATTATTACACAGTTCAAACAAGTTACTGGCCAGATTT
TAGATCATTTGCTGTGGGAGACATTAACGGCGATGGTCTAGCAGATATTGTTGCCGCTGACCCTGCAAGTAATGGTCTCA
ATATATTTGTTCAAAATTCCACTGGAAGCATAACCGGCCCTCAGATTCTTCAGTTAACGCCCCTAACTGCGCAAGATGAA
ATTAAAATTGCCGACATGAACTGGGATAGCTTGAATGATATCGTGATATTGAGTGAGCATAGCAAAGTACAAATACTGCC
TCAGACAGCAAATCACTCTTTTGACACCTTTAAATCATTCGATTTACAGACTCAGTTTTCTGGAGGGACATTTACTCATC
AGGCAATGGCACTGATCGATGTTACTAGCGATGGAATGCCTGATGTCATTGCTACCTTATCAGGAGGAGGGTTATTTGTT
CTACCAACGAAGTAA

Upstream 100 bases:

>100_bases
CACCGGCCTAAAACCGCCGGTGTCCTCCCACCACGTTGGCATCATAGGTCAACACCATATCAAATAGCATCTACATATCA
TGGGAAGAGGATTAACTATA

Downstream 100 bases:

>100_bases
TAAGAAAAAAGGGGGGAAGGTCATGAGGAGTTGCGTCTCCAACTTTCAGTAAATGAATAGAATGCAAATCGTCTCGCAGG
GCTTCTCCGCTGCGTATCCG

Product: lipoprotein

Products: NA

Alternate protein names: Integrin-Like Protein; Nidogen Extracellular Region; Fg-Gap Repeat Protein; Integrins Subunit Alpha; FG-GAP Repeat- Calx-Beta Domain-Containing Protein; Lipoprotein

Number of amino acids: Translated: 404; Mature: 404

Protein sequence:

>404_residues
MNRYFFRMCCSLFICMLVSSCGGQNEGNQQPRNTQLQFSAGIGYPVPATAFTNAFGDIATGDLNGDGRNDVAVIEANGSK
GILIYCQNAMGALNEPLIIDSSLQLSGITVGDVNNDGLSDLVVSGDVPGLPELRGRTKVYIQNRSTHALDPDQEYALSTD
TAGTLAIADLNSDGRKDIVVASVQGSNGLLSIFFQETGGLGAEQTYTSVPVVYGGEVHVADMNNDGRNDIIVQSDLKQLA
VIKQSSPGIFNATPDYYTVQTSYWPDFRSFAVGDINGDGLADIVAADPASNGLNIFVQNSTGSITGPQILQLTPLTAQDE
IKIADMNWDSLNDIVILSEHSKVQILPQTANHSFDTFKSFDLQTQFSGGTFTHQAMALIDVTSDGMPDVIATLSGGGLFV
LPTK

Sequences:

>Translated_404_residues
MNRYFFRMCCSLFICMLVSSCGGQNEGNQQPRNTQLQFSAGIGYPVPATAFTNAFGDIATGDLNGDGRNDVAVIEANGSK
GILIYCQNAMGALNEPLIIDSSLQLSGITVGDVNNDGLSDLVVSGDVPGLPELRGRTKVYIQNRSTHALDPDQEYALSTD
TAGTLAIADLNSDGRKDIVVASVQGSNGLLSIFFQETGGLGAEQTYTSVPVVYGGEVHVADMNNDGRNDIIVQSDLKQLA
VIKQSSPGIFNATPDYYTVQTSYWPDFRSFAVGDINGDGLADIVAADPASNGLNIFVQNSTGSITGPQILQLTPLTAQDE
IKIADMNWDSLNDIVILSEHSKVQILPQTANHSFDTFKSFDLQTQFSGGTFTHQAMALIDVTSDGMPDVIATLSGGGLFV
LPTK
>Mature_404_residues
MNRYFFRMCCSLFICMLVSSCGGQNEGNQQPRNTQLQFSAGIGYPVPATAFTNAFGDIATGDLNGDGRNDVAVIEANGSK
GILIYCQNAMGALNEPLIIDSSLQLSGITVGDVNNDGLSDLVVSGDVPGLPELRGRTKVYIQNRSTHALDPDQEYALSTD
TAGTLAIADLNSDGRKDIVVASVQGSNGLLSIFFQETGGLGAEQTYTSVPVVYGGEVHVADMNNDGRNDIIVQSDLKQLA
VIKQSSPGIFNATPDYYTVQTSYWPDFRSFAVGDINGDGLADIVAADPASNGLNIFVQNSTGSITGPQILQLTPLTAQDE
IKIADMNWDSLNDIVILSEHSKVQILPQTANHSFDTFKSFDLQTQFSGGTFTHQAMALIDVTSDGMPDVIATLSGGGLFV
LPTK

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 42956; Mature: 42956

Theoretical pI: Translated: 4.04; Mature: 4.04

Prosite motif: PS00013 PROKAR_LIPOPROTEIN

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.2 %Cys     (Translated Protein)
2.0 %Met     (Translated Protein)
3.2 %Cys+Met (Translated Protein)
1.2 %Cys     (Mature Protein)
2.0 %Met     (Mature Protein)
3.2 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MNRYFFRMCCSLFICMLVSSCGGQNEGNQQPRNTQLQFSAGIGYPVPATAFTNAFGDIAT
CCHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCEEEEECCCCCCCCHHHHHHCCCCCEE
GDLNGDGRNDVAVIEANGSKGILIYCQNAMGALNEPLIIDSSLQLSGITVGDVNNDGLSD
CCCCCCCCCCEEEEEECCCCEEEEEECCCCCCCCCCEEEECCCEEEEEEEECCCCCCCCE
LVVSGDVPGLPELRGRTKVYIQNRSTHALDPDQEYALSTDTAGTLAIADLNSDGRKDIVV
EEEECCCCCCCCCCCCEEEEEECCCCCCCCCCHHEEEECCCCCEEEEEECCCCCCCEEEE
ASVQGSNGLLSIFFQETGGLGAEQTYTSVPVVYGGEVHVADMNNDGRNDIIVQSDLKQLA
EEEECCCCEEEEEEEECCCCCCCCCCCCCCEEECCEEEEEECCCCCCCCEEECCCHHEEE
VIKQSSPGIFNATPDYYTVQTSYWPDFRSFAVGDINGDGLADIVAADPASNGLNIFVQNS
EEECCCCCEEECCCCEEEEEECCCCCCCCEEEECCCCCCCEEEEECCCCCCCCEEEEECC
TGSITGPQILQLTPLTAQDEIKIADMNWDSLNDIVILSEHSKVQILPQTANHSFDTFKSF
CCCCCCCEEEEEECCCCCCCEEEEECCCCCCCCEEEEECCCEEEEEECCCCCCCCCCCCC
DLQTQFSGGTFTHQAMALIDVTSDGMPDVIATLSGGGLFVLPTK
CEEEEECCCCEEEEEEEEEEECCCCCCCEEEEECCCCEEEEECC
>Mature Secondary Structure
MNRYFFRMCCSLFICMLVSSCGGQNEGNQQPRNTQLQFSAGIGYPVPATAFTNAFGDIAT
CCHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCEEEEECCCCCCCCHHHHHHCCCCCEE
GDLNGDGRNDVAVIEANGSKGILIYCQNAMGALNEPLIIDSSLQLSGITVGDVNNDGLSD
CCCCCCCCCCEEEEEECCCCEEEEEECCCCCCCCCCEEEECCCEEEEEEEECCCCCCCCE
LVVSGDVPGLPELRGRTKVYIQNRSTHALDPDQEYALSTDTAGTLAIADLNSDGRKDIVV
EEEECCCCCCCCCCCCEEEEEECCCCCCCCCCHHEEEECCCCCEEEEEECCCCCCCEEEE
ASVQGSNGLLSIFFQETGGLGAEQTYTSVPVVYGGEVHVADMNNDGRNDIIVQSDLKQLA
EEEECCCCEEEEEEEECCCCCCCCCCCCCCEEECCEEEEEECCCCCCCCEEECCCHHEEE
VIKQSSPGIFNATPDYYTVQTSYWPDFRSFAVGDINGDGLADIVAADPASNGLNIFVQNS
EEECCCCCEEECCCCEEEEEECCCCCCCCEEEECCCCCCCEEEEECCCCCCCCEEEEECC
TGSITGPQILQLTPLTAQDEIKIADMNWDSLNDIVILSEHSKVQILPQTANHSFDTFKSF
CCCCCCCEEEEEECCCCCCCEEEEECCCCCCCCEEEEECCCEEEEEECCCCCCCCCCCCC
DLQTQFSGGTFTHQAMALIDVTSDGMPDVIATLSGGGLFVLPTK
CEEEEECCCCEEEEEEEEEEECCCCCCCEEEEECCCCEEEEECC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: NA