Definition Geobacter sulfurreducens PCA chromosome, complete genome.
Accession NC_002939
Length 3,814,139

Click here to switch to the map view.

The map label for this gene is 39996613

Identifier: 39996613

GI number: 39996613

Start: 1659934

End: 1660860

Strand: Direct

Name: 39996613

Synonym: GSU1513

Alternate gene names: NA

Gene position: 1659934-1660860 (Clockwise)

Preceding gene: 39996612

Following gene: 39996614

Centisome position: 43.52

GC content: 50.59

Gene sequence:

>927_bases
ATGAGTATCGAGATGAGACGGGTGCGTGGAGGGATAGGGGATATCGCCACCTGCCCGTCCTGTCACAATGAGGTAAATAG
CTTCAACTACCGTGTCGACTACGAAAGCGGTGAAAGCTTCATCTATAAGTGCCCATTTTGTGATCTGATGTTTATGTATC
CGCTTATGCTTTCGGAGCTCACTAAACGGCCGATGGAGTCGGTGGATGATGCCGACATGTTCAACAGTTCGGTATTGAAG
AGGCTTCACGAGCAGCTCATAGTCAAGAAGGAGATTGCCGTAGCGCGTGCTTTACTTGGCCGCCATAATTTTTCTCTCCT
TGACGTGGGGTGTGGCACGGGCTGGATCTCTGCGATATGGCGTGACCTGGGTGCCGACGTGACGGGGTTGGAGCCTTCCG
CAAGCCGGCGCAGGATTGCCCGGGAACGACATGGGATCAGAGTGCTCGATAGTTTTGTTGAGGAACTAGGCAGCGAAGAG
AGCTTTGATGTCGTTACCATTAGACACGTATTGGAGCATCTGGAGAATCCGCTTGAGGCGCTCAGACATATTCATTCCCA
CACCAGGCATGACGGGCTGTTAGTAGTTGTTGTACCTAATATCGACTGCCTGGGAAGATTTCTTTTCGATACGCGCTGGT
CGTGGATTTTGCCGTGGCATTGCTTGTTTTTCAATCCACGCTCTTTGCAAGGGCTTGTCGAAAGGGCGGGCTTCAAGGTT
GAGAATGTGTATCAGACCCCTTCGCCGCTTTGGTATCCAGAAAGTTTCTTCAGGGTTCTTCCCGGTTCATCAGAATTGAG
AGAGAGATTTTATGCTCGACTTAATATTTGGGCACTTTTGCCGTTTGCTCCTCTCGTCGCTGCAGGTTATCTTAGCGGGT
TCAGCGATAATATAACCCTCATAGCGCGGGCTTGCCGTCATAAATGA

Upstream 100 bases:

>100_bases
TGGGCAATATGGACCATTCATTCATGCAGGGTGTAGAGGTGGCGGACCGCATCCTGAACGGTGCGGACGAGCCGACCGTG
ACCGGTAAGGGAGGGGATAG

Downstream 100 bases:

>100_bases
ATCCCCGGTTGCTCAAACTGATAGATAGTGTGGTGGGACGCACTGCAGCAGCCATCATTCCCCCGCCATCGCTTGTTCTG
CAGCCACACCTCCCCAAGTC

Product: hypothetical protein

Products: NA

Alternate protein names: Ubiquinone/Menaquinone Biosynthesis Methylase-Like Protein; Methyltransferase; Methylase/Methyltransferase; Methyltransferase Domain Family; 3-Demethylubiquinone-9 3-O-Methyltransferase; Glycosyl Transferase Family Protein

Number of amino acids: Translated: 308; Mature: 307

Protein sequence:

>308_residues
MSIEMRRVRGGIGDIATCPSCHNEVNSFNYRVDYESGESFIYKCPFCDLMFMYPLMLSELTKRPMESVDDADMFNSSVLK
RLHEQLIVKKEIAVARALLGRHNFSLLDVGCGTGWISAIWRDLGADVTGLEPSASRRRIARERHGIRVLDSFVEELGSEE
SFDVVTIRHVLEHLENPLEALRHIHSHTRHDGLLVVVVPNIDCLGRFLFDTRWSWILPWHCLFFNPRSLQGLVERAGFKV
ENVYQTPSPLWYPESFFRVLPGSSELRERFYARLNIWALLPFAPLVAAGYLSGFSDNITLIARACRHK

Sequences:

>Translated_308_residues
MSIEMRRVRGGIGDIATCPSCHNEVNSFNYRVDYESGESFIYKCPFCDLMFMYPLMLSELTKRPMESVDDADMFNSSVLK
RLHEQLIVKKEIAVARALLGRHNFSLLDVGCGTGWISAIWRDLGADVTGLEPSASRRRIARERHGIRVLDSFVEELGSEE
SFDVVTIRHVLEHLENPLEALRHIHSHTRHDGLLVVVVPNIDCLGRFLFDTRWSWILPWHCLFFNPRSLQGLVERAGFKV
ENVYQTPSPLWYPESFFRVLPGSSELRERFYARLNIWALLPFAPLVAAGYLSGFSDNITLIARACRHK
>Mature_307_residues
SIEMRRVRGGIGDIATCPSCHNEVNSFNYRVDYESGESFIYKCPFCDLMFMYPLMLSELTKRPMESVDDADMFNSSVLKR
LHEQLIVKKEIAVARALLGRHNFSLLDVGCGTGWISAIWRDLGADVTGLEPSASRRRIARERHGIRVLDSFVEELGSEES
FDVVTIRHVLEHLENPLEALRHIHSHTRHDGLLVVVVPNIDCLGRFLFDTRWSWILPWHCLFFNPRSLQGLVERAGFKVE
NVYQTPSPLWYPESFFRVLPGSSELRERFYARLNIWALLPFAPLVAAGYLSGFSDNITLIARACRHK

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 35327; Mature: 35196

Theoretical pI: Translated: 7.12; Mature: 7.12

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

2.6 %Cys     (Translated Protein)
2.3 %Met     (Translated Protein)
4.9 %Cys+Met (Translated Protein)
2.6 %Cys     (Mature Protein)
2.0 %Met     (Mature Protein)
4.6 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MSIEMRRVRGGIGDIATCPSCHNEVNSFNYRVDYESGESFIYKCPFCDLMFMYPLMLSEL
CCCCHHHHHCCCCCCCCCCHHHHHHHCCEEEEEECCCCCEEEECCHHHHHHHHHHHHHHH
TKRPMESVDDADMFNSSVLKRLHEQLIVKKEIAVARALLGRHNFSLLDVGCGTGWISAIW
HHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCEEEEECCCHHHHHHHH
RDLGADVTGLEPSASRRRIARERHGIRVLDSFVEELGSEESFDVVTIRHVLEHLENPLEA
HHHCCCCCCCCCCHHHHHHHHHHCCHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHH
LRHIHSHTRHDGLLVVVVPNIDCLGRFLFDTRWSWILPWHCLFFNPRSLQGLVERAGFKV
HHHHHHHCCCCCEEEEEECCHHHHHHHHHHCCCCCCCCCHHEEECCHHHHHHHHHCCCCC
ENVYQTPSPLWYPESFFRVLPGSSELRERFYARLNIWALLPFAPLVAAGYLSGFSDNITL
HHHCCCCCCCCCCHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHH
IARACRHK
HHHHHCCC
>Mature Secondary Structure 
SIEMRRVRGGIGDIATCPSCHNEVNSFNYRVDYESGESFIYKCPFCDLMFMYPLMLSEL
CCCHHHHHCCCCCCCCCCHHHHHHHCCEEEEEECCCCCEEEECCHHHHHHHHHHHHHHH
TKRPMESVDDADMFNSSVLKRLHEQLIVKKEIAVARALLGRHNFSLLDVGCGTGWISAIW
HHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCEEEEECCCHHHHHHHH
RDLGADVTGLEPSASRRRIARERHGIRVLDSFVEELGSEESFDVVTIRHVLEHLENPLEA
HHHCCCCCCCCCCHHHHHHHHHHCCHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHH
LRHIHSHTRHDGLLVVVVPNIDCLGRFLFDTRWSWILPWHCLFFNPRSLQGLVERAGFKV
HHHHHHHCCCCCEEEEEECCHHHHHHHHHHCCCCCCCCCHHEEECCHHHHHHHHHCCCCC
ENVYQTPSPLWYPESFFRVLPGSSELRERFYARLNIWALLPFAPLVAAGYLSGFSDNITL
HHHCCCCCCCCCCHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHH
IARACRHK
HHHHHCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA