| Definition | Geobacter sulfurreducens PCA chromosome, complete genome. |
|---|---|
| Accession | NC_002939 |
| Length | 3,814,139 |
Click here to switch to the map view.
The map label for this gene is 39996603
Identifier: 39996603
GI number: 39996603
Start: 1648173
End: 1649075
Strand: Direct
Name: 39996603
Synonym: GSU1503
Alternate gene names: NA
Gene position: 1648173-1649075 (Clockwise)
Preceding gene: 39996602
Following gene: 39996604
Centisome position: 43.21
GC content: 56.48
Gene sequence:
>903_bases ATGCGGACTGCGTTGCTACAAAACCTTTTCAGCCTTTTCCCCTTTGACCTGCACGGGGACTGCGATGTGCCGCCGGCGCG GGACGGTATCAGGGTGTCCTGCATCATCAATTTCTACGGGCGCCTGAACGTTCTTGCCGGTATTCTCTGGTCCCTTGCCC AGCAGGATTTCCCTCGGTCGGCCTTTGAGGTGATCTTGGTCGAAGATCGCGGAGGCAGCGATGAGGGGAGGGCGCTGGCC GAGGAATTTTCCTCACGCTTGCCCATTGTCTATGCTCCTCTCGACAAACAGTATGGCCTCATGGGGTACTCAAGAAACTT CGGGCTTGAGCGATCGCGGGGAGAATTCATTCTTTTTCTCGACGATGACACCATAATCCTGCAGGACGATTTTCTGAAAA CAATGGTGGCCTATTTTGACGCGCAGCCCGGCGTTTCGGCCATAATGCCCCACGGCGAGGCCAGTTTCGCCTTTGTGGAC GACCGCTATGATTTTCACGACCCGTTTTTCATGACGAGCCGTTGCACGGCCTATCGCCGCACAGTGCTTGCCTCTCTGGG CGGGTTCATGTCGTCATTCATCGGCCAGGAGGATGTTGAGTTCGTCATCCGTTTCCATGCGGCCGGCAATCGTTGCGCTG CCGTACCGCAACTGGCCTACCGGCATCCGCCGCTCTATGTCACGAACCTCGGCAAACCAATGGCGGTGGGGTCTTCTTTT TATGGGATCAGAAAACGCTATCCGTTGGTTACATGGTTATTGGCGGTGGTCAACTGTTCACGTCATCTGCCGCTGGTGCT GGCGCCATCACGCAAGTACCGGGAAATGGGTCGCTTTGGGCTCGGATTTCTGTGGGGTGTGCTGACGGCCCCCTTTCGCA GCGGTAGCCTTAACTATCGATAG
Upstream 100 bases:
>100_bases GGGGATCCGACCGAATCGCTCTTGAAAGACATCCCGCTGCTGCTGGTAAGCTTGGCCTGGGCTGCCATCATCGGCTGGCG CCTCTATTTCTAGGAGTTCA
Downstream 100 bases:
>100_bases GTCATGCAGATGAACCCAGGGACAGGGAGTCAGGCACAAGAAGAGATCATTATCGAGGCGGGGCGGACTGAAGTCCGCTA CTGGAGCGATGTCTGGCGCT
Product: glycosyl transferase, group 2 family protein
Products: NA
Alternate protein names: Glycosyl Transferase Group 2 Family Protein
Number of amino acids: Translated: 300; Mature: 300
Protein sequence:
>300_residues MRTALLQNLFSLFPFDLHGDCDVPPARDGIRVSCIINFYGRLNVLAGILWSLAQQDFPRSAFEVILVEDRGGSDEGRALA EEFSSRLPIVYAPLDKQYGLMGYSRNFGLERSRGEFILFLDDDTIILQDDFLKTMVAYFDAQPGVSAIMPHGEASFAFVD DRYDFHDPFFMTSRCTAYRRTVLASLGGFMSSFIGQEDVEFVIRFHAAGNRCAAVPQLAYRHPPLYVTNLGKPMAVGSSF YGIRKRYPLVTWLLAVVNCSRHLPLVLAPSRKYREMGRFGLGFLWGVLTAPFRSGSLNYR
Sequences:
>Translated_300_residues MRTALLQNLFSLFPFDLHGDCDVPPARDGIRVSCIINFYGRLNVLAGILWSLAQQDFPRSAFEVILVEDRGGSDEGRALA EEFSSRLPIVYAPLDKQYGLMGYSRNFGLERSRGEFILFLDDDTIILQDDFLKTMVAYFDAQPGVSAIMPHGEASFAFVD DRYDFHDPFFMTSRCTAYRRTVLASLGGFMSSFIGQEDVEFVIRFHAAGNRCAAVPQLAYRHPPLYVTNLGKPMAVGSSF YGIRKRYPLVTWLLAVVNCSRHLPLVLAPSRKYREMGRFGLGFLWGVLTAPFRSGSLNYR >Mature_300_residues MRTALLQNLFSLFPFDLHGDCDVPPARDGIRVSCIINFYGRLNVLAGILWSLAQQDFPRSAFEVILVEDRGGSDEGRALA EEFSSRLPIVYAPLDKQYGLMGYSRNFGLERSRGEFILFLDDDTIILQDDFLKTMVAYFDAQPGVSAIMPHGEASFAFVD DRYDFHDPFFMTSRCTAYRRTVLASLGGFMSSFIGQEDVEFVIRFHAAGNRCAAVPQLAYRHPPLYVTNLGKPMAVGSSF YGIRKRYPLVTWLLAVVNCSRHLPLVLAPSRKYREMGRFGLGFLWGVLTAPFRSGSLNYR
Specific function: Unknown
COG id: COG0463
COG function: function code M; Glycosyltransferases involved in cell wall biogenesis
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 33835; Mature: 33835
Theoretical pI: Translated: 7.89; Mature: 7.89
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.7 %Cys (Translated Protein) 2.7 %Met (Translated Protein) 4.3 %Cys+Met (Translated Protein) 1.7 %Cys (Mature Protein) 2.7 %Met (Mature Protein) 4.3 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MRTALLQNLFSLFPFDLHGDCDVPPARDGIRVSCIINFYGRLNVLAGILWSLAQQDFPRS CHHHHHHHHHHHCCCCCCCCCCCCCCCCCEEEEEEEEHHHHHHHHHHHHHHHHHHCCCCC AFEVILVEDRGGSDEGRALAEEFSSRLPIVYAPLDKQYGLMGYSRNFGLERSRGEFILFL EEEEEEEECCCCCCHHHHHHHHHHCCCCEEEECCCCCCCCCCCCCCCCCCCCCCCEEEEE DDDTIILQDDFLKTMVAYFDAQPGVSAIMPHGEASFAFVDDRYDFHDPFFMTSRCTAYRR CCCEEEECHHHHHHHHHHHCCCCCHHHCCCCCCCCEEEEECCCCCCCCCHHHHHHHHHHH TVLASLGGFMSSFIGQEDVEFVIRFHAAGNRCAAVPQLAYRHPPLYVTNLGKPMAVGSSF HHHHHHHHHHHHHCCCCCEEEEEEEECCCCCCHHCCHHHHCCCCEEEEECCCCCCCCCCH YGIRKRYPLVTWLLAVVNCSRHLPLVLAPSRKYREMGRFGLGFLWGVLTAPFRSGSLNYR HHHHHCCHHHHHHHHHHHCCCCCCEEECCCHHHHHHHHHHHHHHHHHHHCCCCCCCCCCC >Mature Secondary Structure MRTALLQNLFSLFPFDLHGDCDVPPARDGIRVSCIINFYGRLNVLAGILWSLAQQDFPRS CHHHHHHHHHHHCCCCCCCCCCCCCCCCCEEEEEEEEHHHHHHHHHHHHHHHHHHCCCCC AFEVILVEDRGGSDEGRALAEEFSSRLPIVYAPLDKQYGLMGYSRNFGLERSRGEFILFL EEEEEEEECCCCCCHHHHHHHHHHCCCCEEEECCCCCCCCCCCCCCCCCCCCCCCEEEEE DDDTIILQDDFLKTMVAYFDAQPGVSAIMPHGEASFAFVDDRYDFHDPFFMTSRCTAYRR CCCEEEECHHHHHHHHHHHCCCCCHHHCCCCCCCCEEEEECCCCCCCCCHHHHHHHHHHH TVLASLGGFMSSFIGQEDVEFVIRFHAAGNRCAAVPQLAYRHPPLYVTNLGKPMAVGSSF HHHHHHHHHHHHHCCCCCEEEEEEEECCCCCCHHCCHHHHCCCCEEEEECCCCCCCCCCH YGIRKRYPLVTWLLAVVNCSRHLPLVLAPSRKYREMGRFGLGFLWGVLTAPFRSGSLNYR HHHHHCCHHHHHHHHHHHCCCCCCEEECCCHHHHHHHHHHHHHHHHHHHCCCCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA