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The map label for this gene is ppdD [C]

Identifier: 39996596

GI number: 39996596

Start: 1642257

End: 1642529

Strand: Direct

Name: ppdD [C]

Synonym: GSU1496

Alternate gene names: 39996596

Gene position: 1642257-1642529 (Clockwise)

Preceding gene: 39996595

Following gene: 39996597

Centisome position: 43.06

GC content: 49.08

Gene sequence:

>273_bases
TTGGCCAATTACCCCCATACCCCAACACAAGCAGCAAAAAGAAGAAAGGAGACACTTATGCTTCAGAAACTCAGAAACAG
GAAAGGTTTCACCCTTATCGAGCTGCTGATCGTCGTTGCGATCATCGGTATTCTCGCTGCAATTGCGATTCCGCAGTTCT
CGGCGTATCGTGTCAAGGCGTACAACAGCGCGGCGTCAAGCGACTTGAGAAACCTGAAGACTGCTCTTGAGTCCGCATTT
GCTGATGATCAAACCTATCCGCCCGAAAGTTAA

Upstream 100 bases:

>100_bases
TGAAGCGGTTGCGTTGTGTAACGTGCTGAAATTGTAGCCATGTATAAGTTGGTTCGGCTTTTGCTATGTTCACGATAACG
TTTAAGGATTAAACGGATAA

Downstream 100 bases:

>100_bases
TTGATTAAATACATACTGGAGGAAACCATGAAAAAGATCATTACTATAGTTGCTATGTTGCTCGCAATGCAGGGAATAGC
CATTGCCGCCGGGAAAATTC

Product: pilin domain-containing protein

Products: NA

Alternate protein names: Pilin Domain Protein; N-Terminal Methylation

Number of amino acids: Translated: 90; Mature: 89

Protein sequence:

>90_residues
MANYPHTPTQAAKRRKETLMLQKLRNRKGFTLIELLIVVAIIGILAAIAIPQFSAYRVKAYNSAASSDLRNLKTALESAF
ADDQTYPPES

Sequences:

>Translated_90_residues
MANYPHTPTQAAKRRKETLMLQKLRNRKGFTLIELLIVVAIIGILAAIAIPQFSAYRVKAYNSAASSDLRNLKTALESAF
ADDQTYPPES
>Mature_89_residues
ANYPHTPTQAAKRRKETLMLQKLRNRKGFTLIELLIVVAIIGILAAIAIPQFSAYRVKAYNSAASSDLRNLKTALESAFA
DDQTYPPES

Specific function: Not Yet Known. [C]

COG id: COG4969

COG function: function code NU; Tfp pilus assembly protein, major pilin PilA

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 9994; Mature: 9863

Theoretical pI: Translated: 10.32; Mature: 10.32

Prosite motif: PS00409 PROKAR_NTER_METHYL

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
2.2 %Met     (Translated Protein)
2.2 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
1.1 %Met     (Mature Protein)
1.1 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MANYPHTPTQAAKRRKETLMLQKLRNRKGFTLIELLIVVAIIGILAAIAIPQFSAYRVKA
CCCCCCCCHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHH
YNSAASSDLRNLKTALESAFADDQTYPPES
HHHHHHHHHHHHHHHHHHHHCCCCCCCCCC
>Mature Secondary Structure 
ANYPHTPTQAAKRRKETLMLQKLRNRKGFTLIELLIVVAIIGILAAIAIPQFSAYRVKA
CCCCCCCHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHH
YNSAASSDLRNLKTALESAFADDQTYPPES
HHHHHHHHHHHHHHHHHHHHCCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA