| Definition | Geobacter sulfurreducens PCA chromosome, complete genome. |
|---|---|
| Accession | NC_002939 |
| Length | 3,814,139 |
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The map label for this gene is 39996553
Identifier: 39996553
GI number: 39996553
Start: 1591350
End: 1592462
Strand: Direct
Name: 39996553
Synonym: GSU1453
Alternate gene names: NA
Gene position: 1591350-1592462 (Clockwise)
Preceding gene: 39996551
Following gene: 39996554
Centisome position: 41.72
GC content: 56.6
Gene sequence:
>1113_bases ATGGTCGAGCTTTACTTGCATCTGCTAACTACCGGCATGATCAGGGATTTCATCGTTGCGGTGAATATCCTGCTCTTTGT CGTCACACTCGGTCTTTTCCTGACCCTTTTGTTTCACAAGGTTTACGTGGAGAGGCGCACCCGCCGCCTTGCTGCTCTCA AGGAGCGGTATCTCGAAGAGCTGACGCACAAATGCTATGAACCAACCCTTGCGATCCCGAAGCCGACCACGGCACTGGAG TACGATGCTCTTGGCGCCGTGTTTGCCACGATGCTCGTGAACGTCTCCGGCGCCATGGCCGCCAGCGTGCGATGCTTCAT CCGCGAACTGGGCATTGATGCCTATTACCGGGCTCGCGTCCGGTCCCGCTCGTGGGTGAAGAGGTATGTGGCGGTCGAGA AACTCGGCTATTTCGGCTTTCCCGAGCTGAAGCCCCTGTTTCGTTCACTGCTCGATACCGAGAGGGATACGCGGATCATT CCCAAGCTCGTCTGGGCTCTCAGCGTGATTGCCGACCGTGACGACGTGCCATTCATCAATCGCGTCCTGAAAGATCCCCT GTTCATGTCAGCCAAGTTCAACGAATATATTTACACGAATATTATTCGTGCGTTCCGTGAGCGGGATCAGGAGCAGGAAC TGCTGGAACTGTTCACATTTCTCATGGACGACGAAGCGCTGCCGGTCATTCTCAAGCGGGATATCATCCAGGCGTGCGGC AGCGAGATGTTCCTCATCGCCAAGGATCTTGCAGCTGACTGCTTCCGCCGCTTCCACGAAGTGGCCGAGATGCGGATCGC CTGCATTCGCACTCTGCAGCGTTTTTCGGCGGTGGACACGGAGGTGCTTCTGAGCGAATGCCTCCGGGATACCGATTGGC GAATCAGAGGCGTTGCCGCCAAGAGTGCCCACCTTTACTCCCCGGCAGTCGTGGGTTCATTGCGGCAGCTGCTCCACGAC GAAAGCTACCACGTGCGGATTAATTCCGCACTCTCTCTCTCCAGAATGGGAGAGGCGGGGCTCGAAGTCCTCGTGGATGC AACCCGGAGCGAGGACCGGTTCGTGCGCGATGTTTCTCAATACGTGCTGAAGAGGCTCATCTATGCTTCATAA
Upstream 100 bases:
>100_bases CGGTGGATGAACAGTGGTTTGAGTTGCATCCTGAGAAGAATTTTACTAATATTTTCAATTTTTCCATGCAACGGCTAGCA GTTCAGGGGGCATCTGAGAC
Downstream 100 bases:
>100_bases CATCGTTGCCTTCCTGCTGGCGATCCAGCCGGTGATCTTCATTTATTTCATCGTGCTGAACGGGTTCTACACCCTGTTCA CCATCATCTCCCTGCGTGAC
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 370; Mature: 370
Protein sequence:
>370_residues MVELYLHLLTTGMIRDFIVAVNILLFVVTLGLFLTLLFHKVYVERRTRRLAALKERYLEELTHKCYEPTLAIPKPTTALE YDALGAVFATMLVNVSGAMAASVRCFIRELGIDAYYRARVRSRSWVKRYVAVEKLGYFGFPELKPLFRSLLDTERDTRII PKLVWALSVIADRDDVPFINRVLKDPLFMSAKFNEYIYTNIIRAFRERDQEQELLELFTFLMDDEALPVILKRDIIQACG SEMFLIAKDLAADCFRRFHEVAEMRIACIRTLQRFSAVDTEVLLSECLRDTDWRIRGVAAKSAHLYSPAVVGSLRQLLHD ESYHVRINSALSLSRMGEAGLEVLVDATRSEDRFVRDVSQYVLKRLIYAS
Sequences:
>Translated_370_residues MVELYLHLLTTGMIRDFIVAVNILLFVVTLGLFLTLLFHKVYVERRTRRLAALKERYLEELTHKCYEPTLAIPKPTTALE YDALGAVFATMLVNVSGAMAASVRCFIRELGIDAYYRARVRSRSWVKRYVAVEKLGYFGFPELKPLFRSLLDTERDTRII PKLVWALSVIADRDDVPFINRVLKDPLFMSAKFNEYIYTNIIRAFRERDQEQELLELFTFLMDDEALPVILKRDIIQACG SEMFLIAKDLAADCFRRFHEVAEMRIACIRTLQRFSAVDTEVLLSECLRDTDWRIRGVAAKSAHLYSPAVVGSLRQLLHD ESYHVRINSALSLSRMGEAGLEVLVDATRSEDRFVRDVSQYVLKRLIYAS >Mature_370_residues MVELYLHLLTTGMIRDFIVAVNILLFVVTLGLFLTLLFHKVYVERRTRRLAALKERYLEELTHKCYEPTLAIPKPTTALE YDALGAVFATMLVNVSGAMAASVRCFIRELGIDAYYRARVRSRSWVKRYVAVEKLGYFGFPELKPLFRSLLDTERDTRII PKLVWALSVIADRDDVPFINRVLKDPLFMSAKFNEYIYTNIIRAFRERDQEQELLELFTFLMDDEALPVILKRDIIQACG SEMFLIAKDLAADCFRRFHEVAEMRIACIRTLQRFSAVDTEVLLSECLRDTDWRIRGVAAKSAHLYSPAVVGSLRQLLHD ESYHVRINSALSLSRMGEAGLEVLVDATRSEDRFVRDVSQYVLKRLIYAS
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 42711; Mature: 42711
Theoretical pI: Translated: 8.34; Mature: 8.34
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.6 %Cys (Translated Protein) 2.4 %Met (Translated Protein) 4.1 %Cys+Met (Translated Protein) 1.6 %Cys (Mature Protein) 2.4 %Met (Mature Protein) 4.1 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MVELYLHLLTTGMIRDFIVAVNILLFVVTLGLFLTLLFHKVYVERRTRRLAALKERYLEE CHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH LTHKCYEPTLAIPKPTTALEYDALGAVFATMLVNVSGAMAASVRCFIRELGIDAYYRARV HHHHHCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHH RSRSWVKRYVAVEKLGYFGFPELKPLFRSLLDTERDTRIIPKLVWALSVIADRDDVPFIN HHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHCCCCCHHHH RVLKDPLFMSAKFNEYIYTNIIRAFRERDQEQELLELFTFLMDDEALPVILKRDIIQACG HHHHCCHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHCCCCCHHHHHHHHHHHCC SEMFLIAKDLAADCFRRFHEVAEMRIACIRTLQRFSAVDTEVLLSECLRDTDWRIRGVAA CCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHCCCCCEEEEEEC KSAHLYSPAVVGSLRQLLHDESYHVRINSALSLSRMGEAGLEVLVDATRSEDRFVRDVSQ CCHHHCCHHHHHHHHHHHCCCCCEEEECCHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHH YVLKRLIYAS HHHHHHHHCC >Mature Secondary Structure MVELYLHLLTTGMIRDFIVAVNILLFVVTLGLFLTLLFHKVYVERRTRRLAALKERYLEE CHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH LTHKCYEPTLAIPKPTTALEYDALGAVFATMLVNVSGAMAASVRCFIRELGIDAYYRARV HHHHHCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHH RSRSWVKRYVAVEKLGYFGFPELKPLFRSLLDTERDTRIIPKLVWALSVIADRDDVPFIN HHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHCCCCCHHHH RVLKDPLFMSAKFNEYIYTNIIRAFRERDQEQELLELFTFLMDDEALPVILKRDIIQACG HHHHCCHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHCCCCCHHHHHHHHHHHCC SEMFLIAKDLAADCFRRFHEVAEMRIACIRTLQRFSAVDTEVLLSECLRDTDWRIRGVAA CCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHCCCCCEEEEEEC KSAHLYSPAVVGSLRQLLHDESYHVRINSALSLSRMGEAGLEVLVDATRSEDRFVRDVSQ CCHHHCCHHHHHHHHHHHCCCCCEEEECCHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHH YVLKRLIYAS HHHHHHHHCC
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA