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The map label for this gene is trpH [H]

Identifier: 39996548

GI number: 39996548

Start: 1586708

End: 1587574

Strand: Reverse

Name: trpH [H]

Synonym: GSU1448

Alternate gene names: 39996548

Gene position: 1587574-1586708 (Counterclockwise)

Preceding gene: 39996552

Following gene: 39996547

Centisome position: 41.62

GC content: 62.17

Gene sequence:

>867_bases
ATGAAACTGATCGATCTTCACGTTCACTCATACCATTCCGACGGAGTTCTTGCCCCGGCCGTCCTGGTCGCCATGGCCGC
CGAGCGAGGGCTGGCATCGCTCGCCATTGCCGATCACGATGCCGTTGACGGCATTGACGAGGCCGTGGCGGAAGGCGTGC
GGCTCGGCGTCGACGTCATCCCCGCCGTGGAGCTTTCCGTTGAACTGGGACGCTTCAGCGACCTGCACATTCTCGGCTAC
TGCATTGATCACCACGATCCAGCCTTTCGCGATAAACTCGCCGGCTTCAGGTCCGCGCGCGACAACCGGGGCAAGGCGAT
CCTCGAAAAGATCAACCGCCGGCTGCTCCACTCCCGCAAGGCGCCCCTTTCCTATGATGAGGTCCTTTCCATGGCCGGCG
GCGCCGTGGGTCGGCCTCATATCGGCCGCGTACTGGTCGATAATGGGTATGCGCGGGACATGGAAGACGCCTTTCGGCGC
TATCTGATCCCCTGTAACGTACCGAAGCGTTACATGCCGGCCGGCGAGGCAATTGCCGAAATCCGCCGCATTGGCGGCGT
GTCGGTGTTAGCGCACCCCCCGACCATTACCGATGACCGGCGCCGGTTGCGACAGGTTGTCGAACAACTGGCGCAGCTGG
GGCTTGACGGACTCGAAGTGTTCAACAACCTCTGCTTCAAGGACGACATGCTCTACCTCGAACGCCTCGCCGAGGAATTC
GGGCTGCTGATGACGGGAGGATCCGACTTCCACGGCTTCGAGGACGACGTGGAGCTGGGGCGCGGCCGCGGCGGTCTTGC
CGTTGCCCACAGCTTGGCGGAAAAAGTAAAAGAACTGGCAGCGCAACGAAAACACTCCCACGCCTGA

Upstream 100 bases:

>100_bases
CAATCATGGCAACGTCAATGTGAAAACACTCCCATGTATACATTAGTCCCTTGCCAAGGCTGTCATGGCGTGGTTTAGTT
GACAGAGAGGGTAACACACC

Downstream 100 bases:

>100_bases
CAACCGGCATCACGGGTGACGCCCATGGCCGACGCACGGGAAGTTCTCGAAATCATGAAAGAAGTTGCCAAAACCAGAAT
TGCCATGCTGCGGGACGGCA

Product: PHP domain protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 288; Mature: 288

Protein sequence:

>288_residues
MKLIDLHVHSYHSDGVLAPAVLVAMAAERGLASLAIADHDAVDGIDEAVAEGVRLGVDVIPAVELSVELGRFSDLHILGY
CIDHHDPAFRDKLAGFRSARDNRGKAILEKINRRLLHSRKAPLSYDEVLSMAGGAVGRPHIGRVLVDNGYARDMEDAFRR
YLIPCNVPKRYMPAGEAIAEIRRIGGVSVLAHPPTITDDRRRLRQVVEQLAQLGLDGLEVFNNLCFKDDMLYLERLAEEF
GLLMTGGSDFHGFEDDVELGRGRGGLAVAHSLAEKVKELAAQRKHSHA

Sequences:

>Translated_288_residues
MKLIDLHVHSYHSDGVLAPAVLVAMAAERGLASLAIADHDAVDGIDEAVAEGVRLGVDVIPAVELSVELGRFSDLHILGY
CIDHHDPAFRDKLAGFRSARDNRGKAILEKINRRLLHSRKAPLSYDEVLSMAGGAVGRPHIGRVLVDNGYARDMEDAFRR
YLIPCNVPKRYMPAGEAIAEIRRIGGVSVLAHPPTITDDRRRLRQVVEQLAQLGLDGLEVFNNLCFKDDMLYLERLAEEF
GLLMTGGSDFHGFEDDVELGRGRGGLAVAHSLAEKVKELAAQRKHSHA
>Mature_288_residues
MKLIDLHVHSYHSDGVLAPAVLVAMAAERGLASLAIADHDAVDGIDEAVAEGVRLGVDVIPAVELSVELGRFSDLHILGY
CIDHHDPAFRDKLAGFRSARDNRGKAILEKINRRLLHSRKAPLSYDEVLSMAGGAVGRPHIGRVLVDNGYARDMEDAFRR
YLIPCNVPKRYMPAGEAIAEIRRIGGVSVLAHPPTITDDRRRLRQVVEQLAQLGLDGLEVFNNLCFKDDMLYLERLAEEF
GLLMTGGSDFHGFEDDVELGRGRGGLAVAHSLAEKVKELAAQRKHSHA

Specific function: Unknown

COG id: COG0613

COG function: function code R; Predicted metal-dependent phosphoesterases (PHP family)

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the trpH family [H]

Homologues:

Organism=Escherichia coli, GI1787520, Length=265, Percent_Identity=33.9622641509434, Blast_Score=122, Evalue=2e-29,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR004013
- InterPro:   IPR003141
- InterPro:   IPR016195 [H]

Pfam domain/function: PF02811 PHP [H]

EC number: NA

Molecular weight: Translated: 31605; Mature: 31605

Theoretical pI: Translated: 6.51; Mature: 6.51

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.0 %Cys     (Translated Protein)
2.4 %Met     (Translated Protein)
3.5 %Cys+Met (Translated Protein)
1.0 %Cys     (Mature Protein)
2.4 %Met     (Mature Protein)
3.5 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MKLIDLHVHSYHSDGVLAPAVLVAMAAERGLASLAIADHDAVDGIDEAVAEGVRLGVDVI
CCEEEEEEECCCCCCHHHHHHHHHHHHHCCHHHEEECCCHHHCHHHHHHHHHHHHCCHHH
PAVELSVELGRFSDLHILGYCIDHHDPAFRDKLAGFRSARDNRGKAILEKINRRLLHSRK
HHHHHHHHHCCCCCHHHEEEECCCCCHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHCC
APLSYDEVLSMAGGAVGRPHIGRVLVDNGYARDMEDAFRRYLIPCNVPKRYMPAGEAIAE
CCCCHHHHHHHHCCCCCCCCCCEEEECCCCCCCHHHHHHHHCCCCCCCHHHCCCHHHHHH
IRRIGGVSVLAHPPTITDDRRRLRQVVEQLAQLGLDGLEVFNNLCFKDDMLYLERLAEEF
HHHHCCCEEEECCCCCCHHHHHHHHHHHHHHHCCCCHHHHHHHHHCHHHHHHHHHHHHHH
GLLMTGGSDFHGFEDDVELGRGRGGLAVAHSLAEKVKELAAQRKHSHA
CEEEECCCCCCCCCHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHCCCC
>Mature Secondary Structure
MKLIDLHVHSYHSDGVLAPAVLVAMAAERGLASLAIADHDAVDGIDEAVAEGVRLGVDVI
CCEEEEEEECCCCCCHHHHHHHHHHHHHCCHHHEEECCCHHHCHHHHHHHHHHHHCCHHH
PAVELSVELGRFSDLHILGYCIDHHDPAFRDKLAGFRSARDNRGKAILEKINRRLLHSRK
HHHHHHHHHCCCCCHHHEEEECCCCCHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHCC
APLSYDEVLSMAGGAVGRPHIGRVLVDNGYARDMEDAFRRYLIPCNVPKRYMPAGEAIAE
CCCCHHHHHHHHCCCCCCCCCCEEEECCCCCCCHHHHHHHHCCCCCCCHHHCCCHHHHHH
IRRIGGVSVLAHPPTITDDRRRLRQVVEQLAQLGLDGLEVFNNLCFKDDMLYLERLAEEF
HHHHCCCEEEECCCCCCHHHHHHHHHHHHHHHCCCCHHHHHHHHHCHHHHHHHHHHHHHH
GLLMTGGSDFHGFEDDVELGRGRGGLAVAHSLAEKVKELAAQRKHSHA
CEEEECCCCCCCCCHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: DNA [C]

Specific reaction: Protein + DNA = Protein-DNA [C]

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 11677609 [H]