Click here to switch to the map view.

The map label for this gene is 39996532

Identifier: 39996532

GI number: 39996532

Start: 1569651

End: 1571372

Strand: Direct

Name: 39996532

Synonym: GSU1432

Alternate gene names: NA

Gene position: 1569651-1571372 (Clockwise)

Preceding gene: 39996526

Following gene: 39996533

Centisome position: 41.15

GC content: 57.32

Gene sequence:

>1722_bases
ATGAATACGACAACCGTTGCAGCGCTCTTGACCCTTTTTCTTGTTATTCCCGGCTGCGCTACCAGTGGAGCGGTAGGAGC
GCTGCCCGTCAATGAGGCGAGTTTCAAGCCGACTGTTGACATTGCCGGGTCGCGCGCCCTGTATATTTTCGCCAGGGCGC
GGCTGCAGCTGCTGGAAGGGGACGTGGACGGAGCCCTGACGCTGCTCAACGGTGCCATCGAAGCAGATCCGGGCTCAGCA
TATCTCCACACTGCGGTTGCTGAGATCTACATGAAGACGGGGCGGGCCGAAGACGCACTCAAGGCGTGTGAAAATGCCAT
CAGGCTCGATCCTTCGTACCGTCAGGCCCGACTGCTGGCCGGTGCCATTCTGGCCAGTCTCAAGCGCGATAGAGATGCGG
TTCCCCATCTGGAAAAGGCTATCGAGCTCGATCCGTCTCGGGAAGAGGCCTACATTCATCTGGCCGTATCCTACCTGAAG
CTGTTCGAGTACGAGAAGGCGGTAAATACGCTCAAGTCCCTCGTTAAGGTCAAGCCCGAATCATCCCTCGGTTACTATTA
CCTGGGCAAGGCTTACGACCAGATGAAGCTCCAGAAGGAGGCCGCCAACTATTACAAGAAGGCCATTGAACTGAAGCCGG
ACTTTGAGCAGGCCATCATCGAATTGGGGATCGTCCAGGAGGGAATGGGGCTCCACGATGAGGCCGTCGCTACCTATAAG
AGCCTGCTGGATATCAATCCTTACAATCTGAACGTCCTGCAGCATCTGGTTCAGATTTACCTGCAGCAGCAGGAGTATGA
TGAGGCGCTTCCCCTCCTCAAGGGACTCAAGGAAAAGGGGATCGGCGGGTTGGAGACGTCACGCAAGATCGGTCTCATCT
ACATGGAGAGCGAGCGGTACGACGAGGCAATCGCCGAATTCCGGGACATTCTGGAGCGTGAGCCCAATGCCCTGCAAGTC
CGCTTCTATCTGGCGACCGCCTTCGAGGAAAAGGAAGAGTACGACCGGGCGCTCGAAGAGTTCGGCCGGATACCTCCCGG
CTCCTTCAACTATTTCGAGGCCGTCGGGCACATGGCGTTCATCCACAAGGATATGGGGAATCCCGAAAAGGGGATTGCCG
TCCTGAAGGATGCCATCGCCGCATACCCGAGCCATCTGGAGCTTCACCTCTATCTGGCTGGTCTGTACGAGTCTCTTGAT
CACTACACCGAGGGCTTGGCGGTGCTGAAGGCGGTGGAAGGGGATTTCGGGGGCGATCCGCGCCTGCACTTCCGCATGGG
CACCCTTTACGACAAGATGGGGAACAAGGATGAGTCCATCGCCCGGATGAAAAAGGTGCTGACCATCGCGCCGGATGATG
CCCAGGCGCTGAACTACCTGGGGTATACCTATGCGGAGCTCGGCATAAAATTGGACGAGGCGTTGCAGTATCTCAGAAAG
GCGGTTGAACTCCGCCCCAACGATGGTTTCATCCTCGACAGCCTCGGCTGGGTCTATTTCAAGCTGAAGCGTTATGATGA
AGCCGTGCCGCTCCTGGAACGAGCGACAAAGCTTGTGGACGACGATCTCACCATTATGGAGCATCTGGCCGACGCCTATG
CGGCCCGGCGCGAGCATCGCAAGGCCCTTGAACTCTACCGGAAGATCCTGGAAACGGAGCCCGGCCGCAAGGATATCATC
GAGAAGAAGCGCAAGGTCAGGGGGGAGAGCCAGGAAAAATGA

Upstream 100 bases:

>100_bases
TCATTCCACGACAACGGAATCCATTGTGTGGCGAGTGGGGCTTCGGCTGCCTCCGTCCATCGTCGCGTGCCCGCGACCGA
CCGTCACGGCAGGTGTCTCC

Downstream 100 bases:

>100_bases
CGTTCCGGTGGATCGGCTGCCTTCTTGCCCTGCTGTTGATCGTATCGTGCAGCGGCGAAGACCGCGCGAGAGCCCCTGCC
GTGCGCGGACCGGGTACGCC

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 573; Mature: 573

Protein sequence:

>573_residues
MNTTTVAALLTLFLVIPGCATSGAVGALPVNEASFKPTVDIAGSRALYIFARARLQLLEGDVDGALTLLNGAIEADPGSA
YLHTAVAEIYMKTGRAEDALKACENAIRLDPSYRQARLLAGAILASLKRDRDAVPHLEKAIELDPSREEAYIHLAVSYLK
LFEYEKAVNTLKSLVKVKPESSLGYYYLGKAYDQMKLQKEAANYYKKAIELKPDFEQAIIELGIVQEGMGLHDEAVATYK
SLLDINPYNLNVLQHLVQIYLQQQEYDEALPLLKGLKEKGIGGLETSRKIGLIYMESERYDEAIAEFRDILEREPNALQV
RFYLATAFEEKEEYDRALEEFGRIPPGSFNYFEAVGHMAFIHKDMGNPEKGIAVLKDAIAAYPSHLELHLYLAGLYESLD
HYTEGLAVLKAVEGDFGGDPRLHFRMGTLYDKMGNKDESIARMKKVLTIAPDDAQALNYLGYTYAELGIKLDEALQYLRK
AVELRPNDGFILDSLGWVYFKLKRYDEAVPLLERATKLVDDDLTIMEHLADAYAARREHRKALELYRKILETEPGRKDII
EKKRKVRGESQEK

Sequences:

>Translated_573_residues
MNTTTVAALLTLFLVIPGCATSGAVGALPVNEASFKPTVDIAGSRALYIFARARLQLLEGDVDGALTLLNGAIEADPGSA
YLHTAVAEIYMKTGRAEDALKACENAIRLDPSYRQARLLAGAILASLKRDRDAVPHLEKAIELDPSREEAYIHLAVSYLK
LFEYEKAVNTLKSLVKVKPESSLGYYYLGKAYDQMKLQKEAANYYKKAIELKPDFEQAIIELGIVQEGMGLHDEAVATYK
SLLDINPYNLNVLQHLVQIYLQQQEYDEALPLLKGLKEKGIGGLETSRKIGLIYMESERYDEAIAEFRDILEREPNALQV
RFYLATAFEEKEEYDRALEEFGRIPPGSFNYFEAVGHMAFIHKDMGNPEKGIAVLKDAIAAYPSHLELHLYLAGLYESLD
HYTEGLAVLKAVEGDFGGDPRLHFRMGTLYDKMGNKDESIARMKKVLTIAPDDAQALNYLGYTYAELGIKLDEALQYLRK
AVELRPNDGFILDSLGWVYFKLKRYDEAVPLLERATKLVDDDLTIMEHLADAYAARREHRKALELYRKILETEPGRKDII
EKKRKVRGESQEK
>Mature_573_residues
MNTTTVAALLTLFLVIPGCATSGAVGALPVNEASFKPTVDIAGSRALYIFARARLQLLEGDVDGALTLLNGAIEADPGSA
YLHTAVAEIYMKTGRAEDALKACENAIRLDPSYRQARLLAGAILASLKRDRDAVPHLEKAIELDPSREEAYIHLAVSYLK
LFEYEKAVNTLKSLVKVKPESSLGYYYLGKAYDQMKLQKEAANYYKKAIELKPDFEQAIIELGIVQEGMGLHDEAVATYK
SLLDINPYNLNVLQHLVQIYLQQQEYDEALPLLKGLKEKGIGGLETSRKIGLIYMESERYDEAIAEFRDILEREPNALQV
RFYLATAFEEKEEYDRALEEFGRIPPGSFNYFEAVGHMAFIHKDMGNPEKGIAVLKDAIAAYPSHLELHLYLAGLYESLD
HYTEGLAVLKAVEGDFGGDPRLHFRMGTLYDKMGNKDESIARMKKVLTIAPDDAQALNYLGYTYAELGIKLDEALQYLRK
AVELRPNDGFILDSLGWVYFKLKRYDEAVPLLERATKLVDDDLTIMEHLADAYAARREHRKALELYRKILETEPGRKDII
EKKRKVRGESQEK

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Contains 5 TPR repeats [H]

Homologues:

Organism=Homo sapiens, GI32307150, Length=346, Percent_Identity=23.6994219653179, Blast_Score=95, Evalue=2e-19,
Organism=Homo sapiens, GI32307148, Length=346, Percent_Identity=23.6994219653179, Blast_Score=95, Evalue=2e-19,
Organism=Homo sapiens, GI301336134, Length=346, Percent_Identity=21.9653179190751, Blast_Score=74, Evalue=4e-13,
Organism=Homo sapiens, GI83415184, Length=346, Percent_Identity=21.9653179190751, Blast_Score=74, Evalue=5e-13,
Organism=Homo sapiens, GI118766330, Length=225, Percent_Identity=24.4444444444444, Blast_Score=66, Evalue=7e-11,
Organism=Homo sapiens, GI118766328, Length=225, Percent_Identity=24.4444444444444, Blast_Score=66, Evalue=8e-11,
Organism=Caenorhabditis elegans, GI25147174, Length=281, Percent_Identity=23.4875444839858, Blast_Score=86, Evalue=6e-17,
Organism=Caenorhabditis elegans, GI115532690, Length=502, Percent_Identity=22.3107569721116, Blast_Score=82, Evalue=6e-16,
Organism=Caenorhabditis elegans, GI115532692, Length=342, Percent_Identity=23.0994152046784, Blast_Score=79, Evalue=5e-15,
Organism=Drosophila melanogaster, GI17647755, Length=346, Percent_Identity=23.4104046242775, Blast_Score=81, Evalue=2e-15,
Organism=Drosophila melanogaster, GI24585827, Length=346, Percent_Identity=23.4104046242775, Blast_Score=81, Evalue=2e-15,
Organism=Drosophila melanogaster, GI24585829, Length=346, Percent_Identity=23.4104046242775, Blast_Score=81, Evalue=2e-15,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR011717
- InterPro:   IPR013026
- InterPro:   IPR011990
- InterPro:   IPR013105
- InterPro:   IPR019734 [H]

Pfam domain/function: PF07719 TPR_2; PF07721 TPR_4 [H]

EC number: NA

Molecular weight: Translated: 64478; Mature: 64478

Theoretical pI: Translated: 5.29; Mature: 5.29

Prosite motif: PS50005 TPR L=RR ; PS50293 TPR_REGION ; PS00226 IF

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.3 %Cys     (Translated Protein)
1.9 %Met     (Translated Protein)
2.3 %Cys+Met (Translated Protein)
0.3 %Cys     (Mature Protein)
1.9 %Met     (Mature Protein)
2.3 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MNTTTVAALLTLFLVIPGCATSGAVGALPVNEASFKPTVDIAGSRALYIFARARLQLLEG
CCHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCEECCCCCEEEEHHHHHHHHHHC
DVDGALTLLNGAIEADPGSAYLHTAVAEIYMKTGRAEDALKACENAIRLDPSYRQARLLA
CCCHHHHHHCCCCCCCCCCHHHHHHHHHHHHHCCCCHHHHHHHHHHHCCCCCHHHHHHHH
GAILASLKRDRDAVPHLEKAIELDPSREEAYIHLAVSYLKLFEYEKAVNTLKSLVKVKPE
HHHHHHHHHCCCCCHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCC
SSLGYYYLGKAYDQMKLQKEAANYYKKAIELKPDFEQAIIELGIVQEGMGLHDEAVATYK
CCCCEEEECHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHCCCCCCHHHHHHHH
SLLDINPYNLNVLQHLVQIYLQQQEYDEALPLLKGLKEKGIGGLETSRKIGLIYMESERY
HHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCEEEEEEECHHH
DEAIAEFRDILEREPNALQVRFYLATAFEEKEEYDRALEEFGRIPPGSFNYFEAVGHMAF
HHHHHHHHHHHHCCCCEEEEEEEHHHHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHH
IHKDMGNPEKGIAVLKDAIAAYPSHLELHLYLAGLYESLDHYTEGLAVLKAVEGDFGGDP
HHHHCCCCHHHHHHHHHHHHHCCCCEEEHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCC
RLHFRMGTLYDKMGNKDESIARMKKVLTIAPDDAQALNYLGYTYAELGIKLDEALQYLRK
EEEEEHHHHHHHHCCCHHHHHHHHHHHEECCCHHHHHHHHHHHHHHHCCCHHHHHHHHHH
AVELRPNDGFILDSLGWVYFKLKRYDEAVPLLERATKLVDDDLTIMEHLADAYAARREHR
HHHCCCCCCEEEECCCHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHH
KALELYRKILETEPGRKDIIEKKRKVRGESQEK
HHHHHHHHHHCCCCCHHHHHHHHHHHCCCCCCC
>Mature Secondary Structure
MNTTTVAALLTLFLVIPGCATSGAVGALPVNEASFKPTVDIAGSRALYIFARARLQLLEG
CCHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCEECCCCCEEEEHHHHHHHHHHC
DVDGALTLLNGAIEADPGSAYLHTAVAEIYMKTGRAEDALKACENAIRLDPSYRQARLLA
CCCHHHHHHCCCCCCCCCCHHHHHHHHHHHHHCCCCHHHHHHHHHHHCCCCCHHHHHHHH
GAILASLKRDRDAVPHLEKAIELDPSREEAYIHLAVSYLKLFEYEKAVNTLKSLVKVKPE
HHHHHHHHHCCCCCHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCC
SSLGYYYLGKAYDQMKLQKEAANYYKKAIELKPDFEQAIIELGIVQEGMGLHDEAVATYK
CCCCEEEECHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHCCCCCCHHHHHHHH
SLLDINPYNLNVLQHLVQIYLQQQEYDEALPLLKGLKEKGIGGLETSRKIGLIYMESERY
HHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCEEEEEEECHHH
DEAIAEFRDILEREPNALQVRFYLATAFEEKEEYDRALEEFGRIPPGSFNYFEAVGHMAF
HHHHHHHHHHHHCCCCEEEEEEEHHHHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHH
IHKDMGNPEKGIAVLKDAIAAYPSHLELHLYLAGLYESLDHYTEGLAVLKAVEGDFGGDP
HHHHCCCCHHHHHHHHHHHHHCCCCEEEHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCC
RLHFRMGTLYDKMGNKDESIARMKKVLTIAPDDAQALNYLGYTYAELGIKLDEALQYLRK
EEEEEHHHHHHHHCCCHHHHHHHHHHHEECCCHHHHHHHHHHHHHHHCCCHHHHHHHHHH
AVELRPNDGFILDSLGWVYFKLKRYDEAVPLLERATKLVDDDLTIMEHLADAYAARREHR
HHHCCCCCCEEEECCCHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHH
KALELYRKILETEPGRKDIIEKKRKVRGESQEK
HHHHHHHHHHCCCCCHHHHHHHHHHHCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: 7883699; 10984043 [H]