| Definition | Geobacter sulfurreducens PCA chromosome, complete genome. |
|---|---|
| Accession | NC_002939 |
| Length | 3,814,139 |
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The map label for this gene is lgt
Identifier: 39996526
GI number: 39996526
Start: 1562603
End: 1563385
Strand: Direct
Name: lgt
Synonym: GSU1425
Alternate gene names: 39996526
Gene position: 1562603-1563385 (Clockwise)
Preceding gene: 39996525
Following gene: 39996532
Centisome position: 40.97
GC content: 60.15
Gene sequence:
>783_bases ATGCAGTTCCCGCATATTGACCCGGTCTTTTTCCGTCTCGGGCATCTGGAGTTCCGTTGGTATGGCCTGATGTACATCCT CGGGTTCATCGCCGCCTACTTTATTGTCAGGCGCGCTGCCGGCCGTCGCGGTCTCGCCCTGACCCAGGACGACGTTGCCG ATGTGATCTTCTCGCTGGCGATCGGCGTTATCCTCGGCGGCCGTCTGGGATACATTCTCTTCTATAACCTGTCCTACTAC CTCTCCCACCCGCTCAAGCTGTTCGCCGTGTGGGAGGGAGGCATGTCGTTTCACGGCGGTCTCCTGGGCGTGATCCTGGC AGGTGTGTACGTGGCACGGCAAAAGAAAATCGGCTTTCCGGTGCTGGCCGACATCTGTGCGCCGGCGGCACCCGTGGGGT TGGGGCTCGGCAGGCTCGGCAATTTCATCAACGGTGAGCTTTACGGCAGGGTGACCGACGTGCCGTGGGGAATTATTTTC CCCGGTGGCGGCGGAGTGCCCCGGCATCCGTCGCAACTTTACGAAGCGGTGCTGGAGGGGCCGGTGCTCTTTCTGATCCT GATGGCTGTGGGGAGGCGGGAACGTCCGGCTGGCGTGGTGTTCTGGACCTTCATTGCGTTCTATGGCTTGTTCCGGTTCC TGGTTGAGTTTTTCCGGGAGCCCGACGCCCAGCTGGGGCTTCTTGCCGGACCCTTTTCCATGGGGCAGTTGCTAAGTTTT CCCATGTTTCTTCTGGGGTTGACCATGGCCGTCCTTGTTTCACGTAGAAAGGTCGGACCATAG
Upstream 100 bases:
>100_bases ATGGTTTATCGTGAGGGAATGCTGTTGCCGGTGGCGCGTCAATTGACAGTACACCCCCCGTCTGATAGGTTAGGTGAACT TCGAATTCAAGAGGAGCGAC
Downstream 100 bases:
>100_bases GCCAGAAGTCATTTGGGCAGGGGGGGGAAAGAGGTGCGCAGGCATTTCGTCATCTCGAGCACGTTGCCGTCGGCAATCTT GGTGTAGCGAACCGTGTCCA
Product: prolipoprotein diacylglyceryl transferase
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 260; Mature: 260
Protein sequence:
>260_residues MQFPHIDPVFFRLGHLEFRWYGLMYILGFIAAYFIVRRAAGRRGLALTQDDVADVIFSLAIGVILGGRLGYILFYNLSYY LSHPLKLFAVWEGGMSFHGGLLGVILAGVYVARQKKIGFPVLADICAPAAPVGLGLGRLGNFINGELYGRVTDVPWGIIF PGGGGVPRHPSQLYEAVLEGPVLFLILMAVGRRERPAGVVFWTFIAFYGLFRFLVEFFREPDAQLGLLAGPFSMGQLLSF PMFLLGLTMAVLVSRRKVGP
Sequences:
>Translated_260_residues MQFPHIDPVFFRLGHLEFRWYGLMYILGFIAAYFIVRRAAGRRGLALTQDDVADVIFSLAIGVILGGRLGYILFYNLSYY LSHPLKLFAVWEGGMSFHGGLLGVILAGVYVARQKKIGFPVLADICAPAAPVGLGLGRLGNFINGELYGRVTDVPWGIIF PGGGGVPRHPSQLYEAVLEGPVLFLILMAVGRRERPAGVVFWTFIAFYGLFRFLVEFFREPDAQLGLLAGPFSMGQLLSF PMFLLGLTMAVLVSRRKVGP >Mature_260_residues MQFPHIDPVFFRLGHLEFRWYGLMYILGFIAAYFIVRRAAGRRGLALTQDDVADVIFSLAIGVILGGRLGYILFYNLSYY LSHPLKLFAVWEGGMSFHGGLLGVILAGVYVARQKKIGFPVLADICAPAAPVGLGLGRLGNFINGELYGRVTDVPWGIIF PGGGGVPRHPSQLYEAVLEGPVLFLILMAVGRRERPAGVVFWTFIAFYGLFRFLVEFFREPDAQLGLLAGPFSMGQLLSF PMFLLGLTMAVLVSRRKVGP
Specific function: Transfers the N-acyl diglyceride group on what will become the N-terminal cysteine of membrane lipoproteins
COG id: COG0682
COG function: function code M; Prolipoprotein diacylglyceryltransferase
Gene ontology:
Cell location: Cell inner membrane; Multi-pass membrane protein
Metaboloic importance: Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the lgt family
Homologues:
Organism=Escherichia coli, GI1789192, Length=280, Percent_Identity=47.5, Blast_Score=238, Evalue=3e-64,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): LGT_GEOSL (P60970)
Other databases:
- EMBL: AE017180 - RefSeq: NP_952477.1 - GeneID: 2687835 - GenomeReviews: AE017180_GR - KEGG: gsu:GSU1425 - NMPDR: fig|243231.1.peg.1415 - TIGR: GSU1425 - HOGENOM: HBG450278 - OMA: NPIAFSL - ProtClustDB: PRK00052 - BioCyc: GSUL243231:GSU_1425-MONOMER - HAMAP: MF_01147 - InterPro: IPR001640 - TIGRFAMs: TIGR00544
Pfam domain/function: PF01790 LGT
EC number: 2.4.99.- [C]
Molecular weight: Translated: 28664; Mature: 28664
Theoretical pI: Translated: 9.95; Mature: 9.95
Prosite motif: PS01311 LGT
Important sites: NA
Signals:
None
Transmembrane regions:
HASH(0xdac93dc)-; HASH(0xc3bfe5c)-; HASH(0xe22e0a0)-; HASH(0xe203770)-; HASH(0xe3fe3b8)-;
Cys/Met content:
0.4 %Cys (Translated Protein) 2.7 %Met (Translated Protein) 3.1 %Cys+Met (Translated Protein) 0.4 %Cys (Mature Protein) 2.7 %Met (Mature Protein) 3.1 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MQFPHIDPVFFRLGHLEFRWYGLMYILGFIAAYFIVRRAAGRRGLALTQDDVADVIFSLA CCCCCCCHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCEECHHHHHHHHHHHH IGVILGGRLGYILFYNLSYYLSHPLKLFAVWEGGMSFHGGLLGVILAGVYVARQKKIGFP HHHHHCCHHHHHHHHHHHHHHCCCEEEEEEECCCCCHHHHHHHHHHHHHHHHHHHCCCCH VLADICAPAAPVGLGLGRLGNFINGELYGRVTDVPWGIIFPGGGGVPRHPSQLYEAVLEG HHHHHHCCCCHHHHCHHHHCHHHCCCEEEEEECCCCEEEECCCCCCCCCHHHHHHHHHHH PVLFLILMAVGRRERPAGVVFWTFIAFYGLFRFLVEFFREPDAQLGLLAGPFSMGQLLSF HHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHHHHHCCCCCEEEEECCCHHHHHHHH PMFLLGLTMAVLVSRRKVGP HHHHHHHHHHHHHHHHCCCH >Mature Secondary Structure MQFPHIDPVFFRLGHLEFRWYGLMYILGFIAAYFIVRRAAGRRGLALTQDDVADVIFSLA CCCCCCCHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCEECHHHHHHHHHHHH IGVILGGRLGYILFYNLSYYLSHPLKLFAVWEGGMSFHGGLLGVILAGVYVARQKKIGFP HHHHHCCHHHHHHHHHHHHHHCCCEEEEEEECCCCCHHHHHHHHHHHHHHHHHHHCCCCH VLADICAPAAPVGLGLGRLGNFINGELYGRVTDVPWGIIFPGGGGVPRHPSQLYEAVLEG HHHHHHCCCCHHHHCHHHHCHHHCCCEEEEEECCCCEEEECCCCCCCCCHHHHHHHHHHH PVLFLILMAVGRRERPAGVVFWTFIAFYGLFRFLVEFFREPDAQLGLLAGPFSMGQLLSF HHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHHHHHCCCCCEEEEECCCHHHHHHHH PMFLLGLTMAVLVSRRKVGP HHHHHHHHHHHHHHHHCCCH
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 7.0
TargetDB status: NA
Availability: NA
References: NA