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The map label for this gene is 39996492

Identifier: 39996492

GI number: 39996492

Start: 1519490

End: 1519960

Strand: Direct

Name: 39996492

Synonym: GSU1390

Alternate gene names: NA

Gene position: 1519490-1519960 (Clockwise)

Preceding gene: 39996491

Following gene: 39996493

Centisome position: 39.84

GC content: 60.51

Gene sequence:

>471_bases
ATGCTGCCAAGCCGAAAACGTCTCGTTCTTGAACAACTGGGGAAAACTCTCTCACGTTTCGCCGGACTACAAGCAGTATC
TCCCCCGGCAAGGGGGTGGATACGAGCCATCCGGGAAGCGTTGGGGATGTCTGGCGTACAGTTTGCCGCCCGTTTGGGGG
TGACGCCGCCACGGGTGACGGCGCTGGAACGGGATGAACTGTCCGGGGCCGTTACCATGAAGACCATGCGCCAGGCTGCG
GAGGCTCTGGATTGCGTGTTTCTCTATGCTCTGGTGCCGCGCACGAGCCTTGAGGAAACCATTAGGAGGCAGGCGGAGGC
CGTGGCGCGTGAGCGCCTGTTGCGGGTGTCCCACACCATGATGCTGGAAAGCCAGCAGCTCTCGGAAGAGGAGATGAAAC
AGGCGCTGGATGCTGCGGTGGAGGAACTGGTGCGGACTATGCCGAAAGATTTGTGGAGCAAAGCCCCATGA

Upstream 100 bases:

>100_bases
GGACTATCGGTACAAATTAACCTTAATATTAATAATACTGTTGAATAAATTAACAAATATATTAATATTTGTAGTAATAA
AATTAATTTAGAGGTTAATT

Downstream 100 bases:

>100_bases
ACTTCGAGTACCCCGACGGGGCAACTCCTCTTGATTCAGATGAGGCTGAAGGGCTTCTCCTGACGCATATTACCTCACGC
GGCGAGCTGGATCGCTGGGA

Product: DNA-binding protein

Products: NA

Alternate protein names: Transcriptional Regulator XRE Family; XRE Family Transcriptional Regulator; HTH-Family Transcriptional Regulator; Transcriptional Regulator; Helix-Turn-Helix Domain-Containing Protein; Transcriptional Regulator HTH Family

Number of amino acids: Translated: 156; Mature: 156

Protein sequence:

>156_residues
MLPSRKRLVLEQLGKTLSRFAGLQAVSPPARGWIRAIREALGMSGVQFAARLGVTPPRVTALERDELSGAVTMKTMRQAA
EALDCVFLYALVPRTSLEETIRRQAEAVARERLLRVSHTMMLESQQLSEEEMKQALDAAVEELVRTMPKDLWSKAP

Sequences:

>Translated_156_residues
MLPSRKRLVLEQLGKTLSRFAGLQAVSPPARGWIRAIREALGMSGVQFAARLGVTPPRVTALERDELSGAVTMKTMRQAA
EALDCVFLYALVPRTSLEETIRRQAEAVARERLLRVSHTMMLESQQLSEEEMKQALDAAVEELVRTMPKDLWSKAP
>Mature_156_residues
MLPSRKRLVLEQLGKTLSRFAGLQAVSPPARGWIRAIREALGMSGVQFAARLGVTPPRVTALERDELSGAVTMKTMRQAA
EALDCVFLYALVPRTSLEETIRRQAEAVARERLLRVSHTMMLESQQLSEEEMKQALDAAVEELVRTMPKDLWSKAP

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 17416; Mature: 17416

Theoretical pI: Translated: 10.26; Mature: 10.26

Prosite motif: PS50943 HTH_CROC1

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.6 %Cys     (Translated Protein)
5.1 %Met     (Translated Protein)
5.8 %Cys+Met (Translated Protein)
0.6 %Cys     (Mature Protein)
5.1 %Met     (Mature Protein)
5.8 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MLPSRKRLVLEQLGKTLSRFAGLQAVSPPARGWIRAIREALGMSGVQFAARLGVTPPRVT
CCCCHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHCCCHHHHHHHHCCCCCHHH
ALERDELSGAVTMKTMRQAAEALDCVFLYALVPRTSLEETIRRQAEAVARERLLRVSHTM
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHH
MLESQQLSEEEMKQALDAAVEELVRTMPKDLWSKAP
HHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHCCCC
>Mature Secondary Structure
MLPSRKRLVLEQLGKTLSRFAGLQAVSPPARGWIRAIREALGMSGVQFAARLGVTPPRVT
CCCCHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHCCCHHHHHHHHCCCCCHHH
ALERDELSGAVTMKTMRQAAEALDCVFLYALVPRTSLEETIRRQAEAVARERLLRVSHTM
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHH
MLESQQLSEEEMKQALDAAVEELVRTMPKDLWSKAP
HHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA