| Definition | Geobacter sulfurreducens PCA chromosome, complete genome. |
|---|---|
| Accession | NC_002939 |
| Length | 3,814,139 |
Click here to switch to the map view.
The map label for this gene is fur [H]
Identifier: 39996481
GI number: 39996481
Start: 1507920
End: 1508351
Strand: Direct
Name: fur [H]
Synonym: GSU1379
Alternate gene names: 39996481
Gene position: 1507920-1508351 (Clockwise)
Preceding gene: 39996480
Following gene: 39996482
Centisome position: 39.54
GC content: 59.49
Gene sequence:
>432_bases ATGAAGCGGGCAAAAAAGCAGATCTTCCATGATTACATCGCCAAGCACGGGCTCAAGTCGACCCGCCAGCGGGATATCAT TCTTGATGCCTTCCTCTCCACCGACCGCCACCTGAGCATCGAGGAGCTGTACCTCAAGCTCAGGGCAAAGCACCCGAACA TTGGTTACGCCACGGTCTACCGCACCCTCAAGCTGTTCGCGGAATCGGGCATCGCCCGGGAGATGCAGTTCGGCGACGGT CAGACCCGCTACGAGCACGTGACCGAAGGTGAGCACCACGACCACCTGGTCTGTACCGGGTGCGGCGCCATCATCGAGTT CGAGAACGAGGCCATCGAGAAGTTGCAGGACGATGTGGCCGCGGCCCACGACTTCGTCATCACCACCCATAAGCTTGAGT TGTACGGTCTCTGCGCCGCCTGTCGCAAATAG
Upstream 100 bases:
>100_bases GGTGAGGCTTCGTTAATCGCTCTCATCTAAGTGATATTTAGTCTTGACGGATCCGGCCGGGCCTTCTATGATGATATTCA CTTTCAGTTGAGGGTGGTCC
Downstream 100 bases:
>100_bases GGCTGATCGTGCCGCGCCGTCCGACGGCCCGGCACTTTTCCCGCGGCGATGTCTGAAAGTGATTTTCACTAGCATAAGAG GCTCATGCAAAACGGTATGA
Product: ferric uptake regulation protein Fur
Products: NA
Alternate protein names: Ferric uptake regulator [H]
Number of amino acids: Translated: 143; Mature: 143
Protein sequence:
>143_residues MKRAKKQIFHDYIAKHGLKSTRQRDIILDAFLSTDRHLSIEELYLKLRAKHPNIGYATVYRTLKLFAESGIAREMQFGDG QTRYEHVTEGEHHDHLVCTGCGAIIEFENEAIEKLQDDVAAAHDFVITTHKLELYGLCAACRK
Sequences:
>Translated_143_residues MKRAKKQIFHDYIAKHGLKSTRQRDIILDAFLSTDRHLSIEELYLKLRAKHPNIGYATVYRTLKLFAESGIAREMQFGDG QTRYEHVTEGEHHDHLVCTGCGAIIEFENEAIEKLQDDVAAAHDFVITTHKLELYGLCAACRK >Mature_143_residues MKRAKKQIFHDYIAKHGLKSTRQRDIILDAFLSTDRHLSIEELYLKLRAKHPNIGYATVYRTLKLFAESGIAREMQFGDG QTRYEHVTEGEHHDHLVCTGCGAIIEFENEAIEKLQDDVAAAHDFVITTHKLELYGLCAACRK
Specific function: Acts as a global negative controlling element, employing Fe(2+) as a cofactor to bind the operator of the repressed genes [H]
COG id: COG0735
COG function: function code P; Fe2+/Zn2+ uptake regulation proteins
Gene ontology:
Cell location: Cytoplasm [H]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the Fur family [H]
Homologues:
Organism=Escherichia coli, GI1786899, Length=134, Percent_Identity=42.5373134328358, Blast_Score=98, Evalue=2e-22,
Paralogues:
None
Copy number: 3432 Molecules/Cell In: Growth Phase, Glucose-minimal MOPS Media. [C]
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR002481 [H]
Pfam domain/function: PF01475 FUR [H]
EC number: NA
Molecular weight: Translated: 16385; Mature: 16385
Theoretical pI: Translated: 7.32; Mature: 7.32
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
2.8 %Cys (Translated Protein) 1.4 %Met (Translated Protein) 4.2 %Cys+Met (Translated Protein) 2.8 %Cys (Mature Protein) 1.4 %Met (Mature Protein) 4.2 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MKRAKKQIFHDYIAKHGLKSTRQRDIILDAFLSTDRHLSIEELYLKLRAKHPNIGYATVY CCHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHCCCCCCCHHHHHHHHHCCCCCCCHHHHH RTLKLFAESGIAREMQFGDGQTRYEHVTEGEHHDHLVCTGCGAIIEFENEAIEKLQDDVA HHHHHHHHCCCHHHHHCCCCCCHHHHCCCCCCCCEEEEECCCEEEEECHHHHHHHHHHHH AAHDFVITTHKLELYGLCAACRK HHHHHEEEEHHHHHHHHHHHHCC >Mature Secondary Structure MKRAKKQIFHDYIAKHGLKSTRQRDIILDAFLSTDRHLSIEELYLKLRAKHPNIGYATVY CCHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHCCCCCCCHHHHHHHHHCCCCCCCHHHHH RTLKLFAESGIAREMQFGDGQTRYEHVTEGEHHDHLVCTGCGAIIEFENEAIEKLQDDVA HHHHHHHHCCCHHHHHCCCCCCHHHHCCCCCCCCEEEEECCCEEEEECHHHHHHHHHHHH AAHDFVITTHKLELYGLCAACRK HHHHHEEEEHHHHHHHHHHHHCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: DNA [C]
Specific reaction: Protein + DNA = Protein-DNA [C]
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: 8083178 [H]