Click here to switch to the map view.

The map label for this gene is 39996477

Identifier: 39996477

GI number: 39996477

Start: 1504128

End: 1504802

Strand: Direct

Name: 39996477

Synonym: GSU1375

Alternate gene names: NA

Gene position: 1504128-1504802 (Clockwise)

Preceding gene: 39996475

Following gene: 39996480

Centisome position: 39.44

GC content: 72.15

Gene sequence:

>675_bases
ATGGATCGATCATCACGCAACCGGCTGACGGAGCGGCAGATCCCCCGCTTTGCCGGGGAGACCCTGTTCGACGGCATTGC
CCGGGCGGTCTGTCGTGCGGGCTGTCTGCCGCGCAAGGAACTGTACGAGGCGTGGGAGGTGGCGCGGCGGGTGCGCCGGC
GTTTCCGAGGCGGGCGGGTTGTGGACCTGGCCTGTGGCCACGGGCTGCTGGCCTGGATCATGCTGCTGCTGGACGACAGC
TCCCCCGGCGCACTGGCCGTGGACCGGCGCCTCCCGCCGAGCGCCGCAGGCCTGGCTGCTGTCCTGGAAACGGAGTGGCC
GCGCCTGCGGGGGCGCGTCCGGTTGCTGGAGGCGGATCTGGCGGAGGTGGAACTGGGCCGTGACGATCTGGTCGTCTCGG
CTCATGCCTGCGGGGGGCTGACGGACCTGGTGCTGGCGCGGGCGGTGGCTGCCGGGGCGCGGGTGGCGGTGCTCCCCTGC
TGCCACGATCTGGCCGGGGCCGACCTGGCCGGGCTGCAGGGGTGGCTGGACGGGCCCCTGGCCATGGACGTGCTGCGCGC
GACCGGCCTGCGGGAGCGGGGCTACCGCGTCTTTACCCAACAGATACCTGGGGATATCTCGCCCAAAAACCGGCTGCTGC
TGGCCGAGCCGGCCTCTTTCAGTCCCTGCCGATGA

Upstream 100 bases:

>100_bases
ATTGTGCTCCCAATTCTCAATGTTCCGTGCGATAACTGCACGGGTCGCGAACCCGGCGGACAGGGGACGAACGAGGACGG
GAAGGGGAAGGGCTGACACT

Downstream 100 bases:

>100_bases
CCGAGCCCCAGGTTTCCCCCTCCAGGAAGCTCCCGGCAACGTTGGCTTCCATCTCCTTGAACCGGGCGAAGGGGATGGTG
AAGGTTAGTTTGTCGCTCGC

Product: hypothetical protein

Products: NA

Alternate protein names: None

Number of amino acids: Translated: 224; Mature: 224

Protein sequence:

>224_residues
MDRSSRNRLTERQIPRFAGETLFDGIARAVCRAGCLPRKELYEAWEVARRVRRRFRGGRVVDLACGHGLLAWIMLLLDDS
SPGALAVDRRLPPSAAGLAAVLETEWPRLRGRVRLLEADLAEVELGRDDLVVSAHACGGLTDLVLARAVAAGARVAVLPC
CHDLAGADLAGLQGWLDGPLAMDVLRATGLRERGYRVFTQQIPGDISPKNRLLLAEPASFSPCR

Sequences:

>Translated_224_residues
MDRSSRNRLTERQIPRFAGETLFDGIARAVCRAGCLPRKELYEAWEVARRVRRRFRGGRVVDLACGHGLLAWIMLLLDDS
SPGALAVDRRLPPSAAGLAAVLETEWPRLRGRVRLLEADLAEVELGRDDLVVSAHACGGLTDLVLARAVAAGARVAVLPC
CHDLAGADLAGLQGWLDGPLAMDVLRATGLRERGYRVFTQQIPGDISPKNRLLLAEPASFSPCR
>Mature_224_residues
MDRSSRNRLTERQIPRFAGETLFDGIARAVCRAGCLPRKELYEAWEVARRVRRRFRGGRVVDLACGHGLLAWIMLLLDDS
SPGALAVDRRLPPSAAGLAAVLETEWPRLRGRVRLLEADLAEVELGRDDLVVSAHACGGLTDLVLARAVAAGARVAVLPC
CHDLAGADLAGLQGWLDGPLAMDVLRATGLRERGYRVFTQQIPGDISPKNRLLLAEPASFSPCR

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 24367; Mature: 24367

Theoretical pI: Translated: 8.72; Mature: 8.72

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

3.1 %Cys     (Translated Protein)
1.3 %Met     (Translated Protein)
4.5 %Cys+Met (Translated Protein)
3.1 %Cys     (Mature Protein)
1.3 %Met     (Mature Protein)
4.5 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MDRSSRNRLTERQIPRFAGETLFDGIARAVCRAGCLPRKELYEAWEVARRVRRRFRGGRV
CCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHCCCCE
VDLACGHGLLAWIMLLLDDSSPGALAVDRRLPPSAAGLAAVLETEWPRLRGRVRLLEADL
EEEECCCHHHHHHHHHHCCCCCCCEEECCCCCCCHHHHHHHHHHCCHHHHHHHHHHHHHH
AEVELGRDDLVVSAHACGGLTDLVLARAVAAGARVAVLPCCHDLAGADLAGLQGWLDGPL
HHHHCCCCCEEEEEHHCCCHHHHHHHHHHHCCCCEEEEHHHHHHCCCCHHHHHHHCCCHH
AMDVLRATGLRERGYRVFTQQIPGDISPKNRLLLAEPASFSPCR
HHHHHHHHCCHHCCHHHHHHHCCCCCCCCCCEEEECCCCCCCCC
>Mature Secondary Structure
MDRSSRNRLTERQIPRFAGETLFDGIARAVCRAGCLPRKELYEAWEVARRVRRRFRGGRV
CCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHCCCCE
VDLACGHGLLAWIMLLLDDSSPGALAVDRRLPPSAAGLAAVLETEWPRLRGRVRLLEADL
EEEECCCHHHHHHHHHHCCCCCCCEEECCCCCCCHHHHHHHHHHCCHHHHHHHHHHHHHH
AEVELGRDDLVVSAHACGGLTDLVLARAVAAGARVAVLPCCHDLAGADLAGLQGWLDGPL
HHHHCCCCCEEEEEHHCCCHHHHHHHHHHHCCCCEEEEHHHHHHCCCCHHHHHHHCCCHH
AMDVLRATGLRERGYRVFTQQIPGDISPKNRLLLAEPASFSPCR
HHHHHHHHCCHHCCHHHHHHHCCCCCCCCCCEEEECCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA