| Definition | Geobacter sulfurreducens PCA chromosome, complete genome. |
|---|---|
| Accession | NC_002939 |
| Length | 3,814,139 |
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The map label for this gene is cysW [H]
Identifier: 39996450
GI number: 39996450
Start: 1475038
End: 1475868
Strand: Direct
Name: cysW [H]
Synonym: GSU1348
Alternate gene names: 39996450
Gene position: 1475038-1475868 (Clockwise)
Preceding gene: 39996449
Following gene: 39996451
Centisome position: 38.67
GC content: 67.39
Gene sequence:
>831_bases ATGCCATCATCCATCCGCACCCGTACCGAACCGGCCCCGGTCCGCTGGGCGCTCACCGCCGGCGCGCTCCTGTTCCTCGG CCTCTTTCTCTTCGTGCCCCTGGCCGCGGTCTTTGCCCAGGCCCTGGAAAAGGGGTGGGGCGCCTACCTGGCCGCCATCC GCGAGCCCGACGCCCTGGCGGCGGTGAAGCTGACCCTCGTCACAGCCGCCATCAGCGTTCCCCTGAACCTGGTCTTCGGC GTGGTCGCGGCCTGGGCCATCGCCAAGTTCCAGTTCCGGGGCAAGCAGCTCCTGATCACCCTGATCGATCTGCCGTTTTC GGTGTCGCCGGTCATCTCGGGCCTGATCTACGTCCTGCTGTTCGGGCTCCAGGGATGGCTCGGCCCCTGGCTCCAGGACC ACGACGCGAAGATCATCTTCGCCGTGCCCGGCATCGTCCTGGCCACGGTCTTCGTCACCTTCCCCTTCGTGGCCCGGGAG CTGATCCCGCTCATGGAGGCCCAGGGCACGGACGAGGAAGAGGCGGCCATCACCCTGGGGGCGAACGGCTTCCAGACCTT TTGGCGGGTGACCCTCCCCAACATCAAGTGGGGGCTCCTTTACGGGGTGATCCTGTGCAACGCCCGGGCAATGGGCGAGT TCGGCGCGGTCTCGGTGGTTTCCGGCCATATCCGGGGCGAGACCAACACCATCCCCCTCCACGTGGAGATCCTCTACAAC GAGTACAACTACGCCGCCGCCTTTGCCGTGGCCTCGCTCCTGGCCCTGCTGGCCCTGGTCACCCTGGTCCTGAAGAGCGT GGTCGAGTGGCGGATGCGCGCCGACGCCTGA
Upstream 100 bases:
>100_bases GCCACGGTGATGCTCCTGTTCTCGTTCCTGATGCTCCTGGCCGTGAACCTGCTCCAGAAGTGGAGCCGGCGCCACGCCGC CTGACCCGGAGGACCCGACC
Downstream 100 bases:
>100_bases CCCGGACGCCGCAGCGAAATAAAGGAACCAAGACATGAGCATCGAGATCGCCAACGTCACCAAGCAGTTCGGCAGCTTCA CCGCCCTGGACAACGTGAAC
Product: sulfate ABC transporter permease
Products: ADP; phosphate; S2O32- [Cytoplasm]; SO42- [Cytoplasm] [C]
Alternate protein names: NA
Number of amino acids: Translated: 276; Mature: 275
Protein sequence:
>276_residues MPSSIRTRTEPAPVRWALTAGALLFLGLFLFVPLAAVFAQALEKGWGAYLAAIREPDALAAVKLTLVTAAISVPLNLVFG VVAAWAIAKFQFRGKQLLITLIDLPFSVSPVISGLIYVLLFGLQGWLGPWLQDHDAKIIFAVPGIVLATVFVTFPFVARE LIPLMEAQGTDEEEAAITLGANGFQTFWRVTLPNIKWGLLYGVILCNARAMGEFGAVSVVSGHIRGETNTIPLHVEILYN EYNYAAAFAVASLLALLALVTLVLKSVVEWRMRADA
Sequences:
>Translated_276_residues MPSSIRTRTEPAPVRWALTAGALLFLGLFLFVPLAAVFAQALEKGWGAYLAAIREPDALAAVKLTLVTAAISVPLNLVFG VVAAWAIAKFQFRGKQLLITLIDLPFSVSPVISGLIYVLLFGLQGWLGPWLQDHDAKIIFAVPGIVLATVFVTFPFVARE LIPLMEAQGTDEEEAAITLGANGFQTFWRVTLPNIKWGLLYGVILCNARAMGEFGAVSVVSGHIRGETNTIPLHVEILYN EYNYAAAFAVASLLALLALVTLVLKSVVEWRMRADA >Mature_275_residues PSSIRTRTEPAPVRWALTAGALLFLGLFLFVPLAAVFAQALEKGWGAYLAAIREPDALAAVKLTLVTAAISVPLNLVFGV VAAWAIAKFQFRGKQLLITLIDLPFSVSPVISGLIYVLLFGLQGWLGPWLQDHDAKIIFAVPGIVLATVFVTFPFVAREL IPLMEAQGTDEEEAAITLGANGFQTFWRVTLPNIKWGLLYGVILCNARAMGEFGAVSVVSGHIRGETNTIPLHVEILYNE YNYAAAFAVASLLALLALVTLVLKSVVEWRMRADA
Specific function: Part of the ABC transporter complex CysAWTP (TC 3.A.1.6.1) involved in sulfate/thiosulfate import. Probably responsible for the translocation of the substrate across the membrane [H]
COG id: COG4208
COG function: function code P; ABC-type sulfate transport system, permease component
Gene ontology:
Cell location: Cell inner membrane; Multi-pass membrane protein [H]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Contains 1 ABC transmembrane type-1 domain [H]
Homologues:
Organism=Escherichia coli, GI87082099, Length=269, Percent_Identity=52.4163568773234, Blast_Score=291, Evalue=3e-80, Organism=Escherichia coli, GI1788764, Length=215, Percent_Identity=38.1395348837209, Blast_Score=155, Evalue=2e-39, Organism=Escherichia coli, GI1786980, Length=215, Percent_Identity=32.5581395348837, Blast_Score=88, Evalue=5e-19,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR000515 - InterPro: IPR011866 - InterPro: IPR005667 [H]
Pfam domain/function: PF00528 BPD_transp_1 [H]
EC number: NA
Molecular weight: Translated: 29892; Mature: 29760
Theoretical pI: Translated: 6.80; Mature: 6.80
Prosite motif: PS50928 ABC_TM1
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.4 %Cys (Translated Protein) 1.4 %Met (Translated Protein) 1.8 %Cys+Met (Translated Protein) 0.4 %Cys (Mature Protein) 1.1 %Met (Mature Protein) 1.5 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MPSSIRTRTEPAPVRWALTAGALLFLGLFLFVPLAAVFAQALEKGWGAYLAAIREPDALA CCCCCCCCCCCCCEEHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHH AVKLTLVTAAISVPLNLVFGVVAAWAIAKFQFRGKQLLITLIDLPFSVSPVISGLIYVLL HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCEEEEEEECCCCCHHHHHHHHHHHHH FGLQGWLGPWLQDHDAKIIFAVPGIVLATVFVTFPFVARELIPLMEAQGTDEEEAAITLG HHHHHHHCCCCCCCCCEEEEECHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCEEEEC ANGFQTFWRVTLPNIKWGLLYGVILCNARAMGEFGAVSVVSGHIRGETNTIPLHVEILYN CCCHHHHHEEECCCCHHHHHHHHHHHCCHHCCCCCCHHEEEEEECCCCCEEEEEEEEEEE EYNYAAAFAVASLLALLALVTLVLKSVVEWRMRADA CCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCC >Mature Secondary Structure PSSIRTRTEPAPVRWALTAGALLFLGLFLFVPLAAVFAQALEKGWGAYLAAIREPDALA CCCCCCCCCCCCEEHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHH AVKLTLVTAAISVPLNLVFGVVAAWAIAKFQFRGKQLLITLIDLPFSVSPVISGLIYVLL HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCEEEEEEECCCCCHHHHHHHHHHHHH FGLQGWLGPWLQDHDAKIIFAVPGIVLATVFVTFPFVARELIPLMEAQGTDEEEAAITLG HHHHHHHCCCCCCCCCEEEEECHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCEEEEC ANGFQTFWRVTLPNIKWGLLYGVILCNARAMGEFGAVSVVSGHIRGETNTIPLHVEILYN CCCHHHHHEEECCCCHHHHHHHHHHHCCHHCCCCCCHHEEEEEECCCCCEEEEEEEEEEE EYNYAAAFAVASLLALLALVTLVLKSVVEWRMRADA CCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: ATP; S2O32- [Periplasm]; H2O; SO42- [Periplasm]; ATP [C]
Specific reaction: ATP + S2O32- [Periplasm] + H2O = ADP + phosphate + S2O32- [Cytoplasm] SO42- [Periplasm] + H2O + ATP = SO42- [Cytoplasm] + phosphate + ADP [C]
General reaction: NA
Inhibitor: NA
Structure determination priority: 7.0
TargetDB status: NA
Availability: NA
References: 12471157 [H]