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The map label for this gene is 39996399

Identifier: 39996399

GI number: 39996399

Start: 1416989

End: 1418074

Strand: Direct

Name: 39996399

Synonym: GSU1297

Alternate gene names: NA

Gene position: 1416989-1418074 (Clockwise)

Preceding gene: 39996398

Following gene: 39996400

Centisome position: 37.15

GC content: 55.34

Gene sequence:

>1086_bases
ATGCGCGGCTTTGACAGCAACACAGAAGCTCTCTTTACCTATGTGACACCTGAATCCTTTGTCCCGAAGGACCACCCCTT
GCGGGCCATCCGTAAAATGGCCGACGAAGCCCTGGCAGGGATGGACAAGCTCTTTGACAGCATGTACGCCACAACCGGCC
GCTCCTCAATCCCACCGGAGAAGCTCTTGAAAGCCCAACTGCTGATGATCCTCTACTCCATCCGCAGCAACCGGCAGTTG
GTAGAGCAGATCCATTACAACTTCCTGTTCCGCTGGTTCCTCGGCATGGGCTTGGACGAGAAAGTCTGGGATCATTCCAG
CTTTACCAAGAACAGTGACCGATTGATTGGCTCCGAAGTTGCCGCCGAGTTTCTTTCCCGGGTTCTGGCCCAGGCAGAGC
GTAAGCGACTGTTGTCCCGCGAACACTTCACCGTTGACGGAACTCTCATCGAAGCCTGGGCTTCCATCAAGAGCTTCAAG
CCCAAGGATGGACCTCCTTCAGCCGGTGGTGGCGGCAGAAACGATACCGTGGATTTCAAGGGACAGAAACTTACCAACGA
AACCCATGGTTCCACCACTGACCCTGATGCCCGGCTCTACCGCAAGGGGAAGAACAAGGAAGCCAAGCTCTGCTACCAGG
GACATACCCTGATGGAGAATCGTAGTGGCCTCATCATCAGGACCAAGGTGACAACGGCAACCGGTTGCGGTGAGCGCGAC
GCAGCAAAGGCCATGGTGCAGCAATTGCCAAGGACGACCCGACGGATCACTCTTGGCTGCGACAAAGGCTACGACACAGA
ATCATTCGTCAAAGAGCTGCGTAGGCTAAAGATAACGCCACACGTGGCCCAGAACACCTCCAACAGGAAATCGGCCATCG
ACGGCAGAACCACCAAGCATCCGAACTACACCATCAGCCAGAAGATCAGGAAACGAATCGAAGAAGGCTTTGGCTGGATG
AAGACCGTGGGCAGCTTACGCAAGACGATGTACCGGGGAATCGAGAAGATCGCCATGCAACTTGATCTGCACGCTGCGGC
CTACAACCTGGTTCGGATGAAAAACCTGGGTCTCGGTGTCACCTGA

Upstream 100 bases:

>100_bases
ATGCGCGTCTCCTTAGCAGGCTGTTGAAATTGAAATAGAGAAAACAGCCTATTTGTGGTACATTGTCGCGCATAACGCTC
TACAATTATTGAGGAAAGTT

Downstream 100 bases:

>100_bases
GAGGGGAAAACCAGGCTACATCAGCAGTATATGAGGTTGATAAAGAGCAAAAAGAACGAGAAACAAAGGTTCTGAGCAAC
AAAACTGATTCAAAAAAAAA

Product: ISGsu2, transposase

Products: NA

Alternate protein names: Transposase IS4 Family Protein; ISBma2 Transposase; ISGsu3 Transposase; IS4 Family Transposase; IS5 Family Transposase N-Terminal Domain Protein; Transposase Is4 Family Protein; ISPsy22 Transposase Truncated; Transposase Or Inactivated Derivative; Transposase And Inactivated Derivative; Transposase Fragment; ISMca1 Transposase; IS5 Family Transposase N-Terminal Domain; Transposase Fragment IS5 Family; Transposase For IS; Acyl-CoA N-Acyltransferase Domain; Transposase-Related Protein; Transposase Mutator Type; Phage-Associated Cell Wall Hydrolase; ISGsu2 Transposase; Prevent-Host-Death Family Protein; Transposase For Insertion Sequence NGRIS-8b; ISSag8 Transposase; IS5 Family Transposase

Number of amino acids: Translated: 361; Mature: 361

Protein sequence:

>361_residues
MRGFDSNTEALFTYVTPESFVPKDHPLRAIRKMADEALAGMDKLFDSMYATTGRSSIPPEKLLKAQLLMILYSIRSNRQL
VEQIHYNFLFRWFLGMGLDEKVWDHSSFTKNSDRLIGSEVAAEFLSRVLAQAERKRLLSREHFTVDGTLIEAWASIKSFK
PKDGPPSAGGGGRNDTVDFKGQKLTNETHGSTTDPDARLYRKGKNKEAKLCYQGHTLMENRSGLIIRTKVTTATGCGERD
AAKAMVQQLPRTTRRITLGCDKGYDTESFVKELRRLKITPHVAQNTSNRKSAIDGRTTKHPNYTISQKIRKRIEEGFGWM
KTVGSLRKTMYRGIEKIAMQLDLHAAAYNLVRMKNLGLGVT

Sequences:

>Translated_361_residues
MRGFDSNTEALFTYVTPESFVPKDHPLRAIRKMADEALAGMDKLFDSMYATTGRSSIPPEKLLKAQLLMILYSIRSNRQL
VEQIHYNFLFRWFLGMGLDEKVWDHSSFTKNSDRLIGSEVAAEFLSRVLAQAERKRLLSREHFTVDGTLIEAWASIKSFK
PKDGPPSAGGGGRNDTVDFKGQKLTNETHGSTTDPDARLYRKGKNKEAKLCYQGHTLMENRSGLIIRTKVTTATGCGERD
AAKAMVQQLPRTTRRITLGCDKGYDTESFVKELRRLKITPHVAQNTSNRKSAIDGRTTKHPNYTISQKIRKRIEEGFGWM
KTVGSLRKTMYRGIEKIAMQLDLHAAAYNLVRMKNLGLGVT
>Mature_361_residues
MRGFDSNTEALFTYVTPESFVPKDHPLRAIRKMADEALAGMDKLFDSMYATTGRSSIPPEKLLKAQLLMILYSIRSNRQL
VEQIHYNFLFRWFLGMGLDEKVWDHSSFTKNSDRLIGSEVAAEFLSRVLAQAERKRLLSREHFTVDGTLIEAWASIKSFK
PKDGPPSAGGGGRNDTVDFKGQKLTNETHGSTTDPDARLYRKGKNKEAKLCYQGHTLMENRSGLIIRTKVTTATGCGERD
AAKAMVQQLPRTTRRITLGCDKGYDTESFVKELRRLKITPHVAQNTSNRKSAIDGRTTKHPNYTISQKIRKRIEEGFGWM
KTVGSLRKTMYRGIEKIAMQLDLHAAAYNLVRMKNLGLGVT

Specific function: Unknown

COG id: COG3666

COG function: function code L; Transposase and inactivated derivatives

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 40784; Mature: 40784

Theoretical pI: Translated: 10.48; Mature: 10.48

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.8 %Cys     (Translated Protein)
3.3 %Met     (Translated Protein)
4.2 %Cys+Met (Translated Protein)
0.8 %Cys     (Mature Protein)
3.3 %Met     (Mature Protein)
4.2 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MRGFDSNTEALFTYVTPESFVPKDHPLRAIRKMADEALAGMDKLFDSMYATTGRSSIPPE
CCCCCCCCCEEEEEECCHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCHH
KLLKAQLLMILYSIRSNRQLVEQIHYNFLFRWFLGMGLDEKVWDHSSFTKNSDRLIGSEV
HHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHCCCCCHHHHCCCCCCCCCCHHHHHHH
AAEFLSRVLAQAERKRLLSREHFTVDGTLIEAWASIKSFKPKDGPPSAGGGGRNDTVDFK
HHHHHHHHHHHHHHHHHHHHCCEEECHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCC
GQKLTNETHGSTTDPDARLYRKGKNKEAKLCYQGHTLMENRSGLIIRTKVTTATGCGERD
CCCCCCCCCCCCCCCHHHHHHCCCCCCCEEEECCCHHHCCCCCEEEEEEECCCCCCCCHH
AAKAMVQQLPRTTRRITLGCDKGYDTESFVKELRRLKITPHVAQNTSNRKSAIDGRTTKH
HHHHHHHHCCHHHHEEEEECCCCCCHHHHHHHHHHHCCCCHHHCCCCCCHHHCCCCCCCC
PNYTISQKIRKRIEEGFGWMKTVGSLRKTMYRGIEKIAMQLDLHAAAYNLVRMKNLGLGV
CCCHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCC
T
C
>Mature Secondary Structure
MRGFDSNTEALFTYVTPESFVPKDHPLRAIRKMADEALAGMDKLFDSMYATTGRSSIPPE
CCCCCCCCCEEEEEECCHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCHH
KLLKAQLLMILYSIRSNRQLVEQIHYNFLFRWFLGMGLDEKVWDHSSFTKNSDRLIGSEV
HHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHCCCCCHHHHCCCCCCCCCCHHHHHHH
AAEFLSRVLAQAERKRLLSREHFTVDGTLIEAWASIKSFKPKDGPPSAGGGGRNDTVDFK
HHHHHHHHHHHHHHHHHHHHCCEEECHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCC
GQKLTNETHGSTTDPDARLYRKGKNKEAKLCYQGHTLMENRSGLIIRTKVTTATGCGERD
CCCCCCCCCCCCCCCHHHHHHCCCCCCCEEEECCCHHHCCCCCEEEEEEECCCCCCCCHH
AAKAMVQQLPRTTRRITLGCDKGYDTESFVKELRRLKITPHVAQNTSNRKSAIDGRTTKH
HHHHHHHHCCHHHHEEEEECCCCCCHHHHHHHHHHHCCCCHHHCCCCCCHHHCCCCCCCC
PNYTISQKIRKRIEEGFGWMKTVGSLRKTMYRGIEKIAMQLDLHAAAYNLVRMKNLGLGV
CCCHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCC
T
C

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: NA