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The map label for this gene is atoS [C]

Identifier: 39996398

GI number: 39996398

Start: 1414746

End: 1416926

Strand: Direct

Name: atoS [C]

Synonym: GSU1296

Alternate gene names: 39996398

Gene position: 1414746-1416926 (Clockwise)

Preceding gene: 39996397

Following gene: 39996399

Centisome position: 37.09

GC content: 61.07

Gene sequence:

>2181_bases
ATGTCGACAGCAACTCTTCCACATACTGTCGGTAAACGATTGTTCCGCCAGACCCTTCTGCTGGCCCTGGCCCTCAGTGT
CGTGTTTTCGGCTGTTTTCACGGTCGTCGAATACTACCGCAGTAAGGTTTCCCTTAACGAGTCCGTTGAGCTTCTGAAAA
AGACCCACCTGGATGCCATAACCGCCGCTCTCTGGAGCCTCGACCGCCAACAGATCGCGGCCCAGATCGACGGAATACAC
CACTATCCTTTCATCAGCTACGTGGCCGTGGTCGATCAGGGCGGGGTCGTCGTAGAATCCGGCACCAGAAGCGAACTGTT
CGGCGATGTCCGCAGAATAGATCTCACTGCGACCTACAACGGACGTCAGGTGTCCCTGGGGTCCCTCTACCTGGAGATCG
ACCGCCAGGCCATCATGCGCGATGCCCTGTCCACCGCGGCCGTAACCCTGCTGTTCCAGACCCTGACCATTACCATCGTG
ATGCTGTTCACCTTCATGCTTTTCGAGCGCCAGGTAACCCGCCATCTGGCTGCTGCTGCGGACTACTTCACCTCCTTCGG
TTTCGCCCGGGTGCAGCAGCCGCTCCAGTTGGACAAGCACCGGTACGGGGACGAGATCGACGCGCTGGTGGAGGCGTTCA
ACAGGATGCGGGAATCCCTGGCCGTTGCCTATCAGCAGCAGCAGGGGATGCTCCAGGCGGTGCGCGAGAGCGAGGCGTTG
CTGCGGGCAATTGCCCGCAGGATACCGAACGGCGGAGTGTGGGTGGTGGACACTGATGGTCGCTATATTATGTTCGAGGG
GAGCCTCGTTGAGTCCCTCGGCCTGAGCGGTCAGGAGGCGTTGGGGCGCATGCCGGGCGACCTGTTCGGAGAGCCGCTTG
CCGACCGGCTGGTGGGCTGTTATCGCCTGGCGCTTGCCGGGGGAACCCTGAGCGAGGAAATCGAGTACCGGGAACGGGTG
CTGTGGATCCAGTTCGCCCCTCTTGAGGACGAACACGGCGCAGTGATGGCCGCCGTGGCCCTCGGTATTGATGTGACCGA
ACGGCGCCAAGCCGAGGCGGAGCGGCGGGAGATGCTGCAGCGGCTGGGCCAGGCCCACAAGATGGAGGCAGTTGGCCGGC
TTGCCGGGGGTATCGCCCACGACTACAACAACAAGCTCACGGTGATTCTCGGCTACGCCCACGTGCTCAAGCTCACCGGC
TTCCAGAGCAAGGAGGCCCCCGAACAGCTCGATCAGATCATCAGGGCGGCTGAGCATTCCCGCGACATCACCCGCCAACT
GCTGGCGTTTACCCGTAGTGAGCGGGTTAATCCCGTCAGGGTCGATCTGAACCGGCTCATCTCCCAGAGCAGCAAATCCC
TGACCCGTCTGATCGGAGAGGACATAACCCTCAGCCATGTGGCCGGCGCAGATCTGTGGCCGGTGCGGATCGATCCGACC
CAGGCCGATCAACTCCTCATGAACCTGGTGATGAACGCCCGCGACGCCATAGCGGGCACCGGCAGTGTCACCATCGCGAC
CTCGAATGTCGTGCTTGACAGGGCAACGGTCAGGCATCTGCAAGGCGCGTCGCCTGGAGAATACGTTCTGATGACGGTAA
GTGATACGGGTTGCGGCATGGACCCCGAGGTGATGGAACATATCTTCGAGCCATTTTACACGACTAAGGAAATGGGAAAA
GGAACCGGCCTCGGACTCGCCACGGTTTACGGGATTGTGCGTCAGAACGGCGGTGCCATCAGCGTTGAGAGCGAGCCCGG
CGGGGGATCGGTCTTTTCCATCTATTTGCCGCGCTTTGTGGGTGAGTCGCACGATGTTCGCCGGCTCGGCGAGGTCGACG
AAACTCTCCCCGCCAGGACCACGCTTCTGGTGGATGACGACGACGCCGTGCGGGATATCACCGCACTGATGTTGCGGCGG
CTCGGTCATACCGTCATAACCGCATCCGATCCCGACGAGGCAATCCACCTCTGTCAGCAGCCCGGCATAGTCGTCGATTT
GATCCTCACCGATGTCATCATGCCGTCCATGAACGGCCGGGAGATGGTCCGGTCTATCCTGTCCCACCAGAAAGCGGCCA
AAGTTCTCTATATGTCCGGCTACCCGGCGGACGTCGTAGAAGGGCGAGGCGCGGTCGACGCCGATGCGCGTCTCCTTAGC
AGGCTGTTGAAATTGAAATAG

Upstream 100 bases:

>100_bases
GCACTCGTCCCGATCCTGGCCGGCGCTCTCAGCCAGATGAAGCGGGACGGGTCGATCAGGCGGATCATGATTTCGGCCCT
CGGAACCGCAGACTGACTCG

Downstream 100 bases:

>100_bases
AGAAAACAGCCTATTTGTGGTACATTGTCGCGCATAACGCTCTACAATTATTGAGGAAAGTTATGCGCGGCTTTGACAGC
AACACAGAAGCTCTCTTTAC

Product: sensory box histidine kinase/response regulator

Products: NA

Alternate protein names: Blue-light-activated histidine kinase; Response regulator [H]

Number of amino acids: Translated: 726; Mature: 725

Protein sequence:

>726_residues
MSTATLPHTVGKRLFRQTLLLALALSVVFSAVFTVVEYYRSKVSLNESVELLKKTHLDAITAALWSLDRQQIAAQIDGIH
HYPFISYVAVVDQGGVVVESGTRSELFGDVRRIDLTATYNGRQVSLGSLYLEIDRQAIMRDALSTAAVTLLFQTLTITIV
MLFTFMLFERQVTRHLAAAADYFTSFGFARVQQPLQLDKHRYGDEIDALVEAFNRMRESLAVAYQQQQGMLQAVRESEAL
LRAIARRIPNGGVWVVDTDGRYIMFEGSLVESLGLSGQEALGRMPGDLFGEPLADRLVGCYRLALAGGTLSEEIEYRERV
LWIQFAPLEDEHGAVMAAVALGIDVTERRQAEAERREMLQRLGQAHKMEAVGRLAGGIAHDYNNKLTVILGYAHVLKLTG
FQSKEAPEQLDQIIRAAEHSRDITRQLLAFTRSERVNPVRVDLNRLISQSSKSLTRLIGEDITLSHVAGADLWPVRIDPT
QADQLLMNLVMNARDAIAGTGSVTIATSNVVLDRATVRHLQGASPGEYVLMTVSDTGCGMDPEVMEHIFEPFYTTKEMGK
GTGLGLATVYGIVRQNGGAISVESEPGGGSVFSIYLPRFVGESHDVRRLGEVDETLPARTTLLVDDDDAVRDITALMLRR
LGHTVITASDPDEAIHLCQQPGIVVDLILTDVIMPSMNGREMVRSILSHQKAAKVLYMSGYPADVVEGRGAVDADARLLS
RLLKLK

Sequences:

>Translated_726_residues
MSTATLPHTVGKRLFRQTLLLALALSVVFSAVFTVVEYYRSKVSLNESVELLKKTHLDAITAALWSLDRQQIAAQIDGIH
HYPFISYVAVVDQGGVVVESGTRSELFGDVRRIDLTATYNGRQVSLGSLYLEIDRQAIMRDALSTAAVTLLFQTLTITIV
MLFTFMLFERQVTRHLAAAADYFTSFGFARVQQPLQLDKHRYGDEIDALVEAFNRMRESLAVAYQQQQGMLQAVRESEAL
LRAIARRIPNGGVWVVDTDGRYIMFEGSLVESLGLSGQEALGRMPGDLFGEPLADRLVGCYRLALAGGTLSEEIEYRERV
LWIQFAPLEDEHGAVMAAVALGIDVTERRQAEAERREMLQRLGQAHKMEAVGRLAGGIAHDYNNKLTVILGYAHVLKLTG
FQSKEAPEQLDQIIRAAEHSRDITRQLLAFTRSERVNPVRVDLNRLISQSSKSLTRLIGEDITLSHVAGADLWPVRIDPT
QADQLLMNLVMNARDAIAGTGSVTIATSNVVLDRATVRHLQGASPGEYVLMTVSDTGCGMDPEVMEHIFEPFYTTKEMGK
GTGLGLATVYGIVRQNGGAISVESEPGGGSVFSIYLPRFVGESHDVRRLGEVDETLPARTTLLVDDDDAVRDITALMLRR
LGHTVITASDPDEAIHLCQQPGIVVDLILTDVIMPSMNGREMVRSILSHQKAAKVLYMSGYPADVVEGRGAVDADARLLS
RLLKLK
>Mature_725_residues
STATLPHTVGKRLFRQTLLLALALSVVFSAVFTVVEYYRSKVSLNESVELLKKTHLDAITAALWSLDRQQIAAQIDGIHH
YPFISYVAVVDQGGVVVESGTRSELFGDVRRIDLTATYNGRQVSLGSLYLEIDRQAIMRDALSTAAVTLLFQTLTITIVM
LFTFMLFERQVTRHLAAAADYFTSFGFARVQQPLQLDKHRYGDEIDALVEAFNRMRESLAVAYQQQQGMLQAVRESEALL
RAIARRIPNGGVWVVDTDGRYIMFEGSLVESLGLSGQEALGRMPGDLFGEPLADRLVGCYRLALAGGTLSEEIEYRERVL
WIQFAPLEDEHGAVMAAVALGIDVTERRQAEAERREMLQRLGQAHKMEAVGRLAGGIAHDYNNKLTVILGYAHVLKLTGF
QSKEAPEQLDQIIRAAEHSRDITRQLLAFTRSERVNPVRVDLNRLISQSSKSLTRLIGEDITLSHVAGADLWPVRIDPTQ
ADQLLMNLVMNARDAIAGTGSVTIATSNVVLDRATVRHLQGASPGEYVLMTVSDTGCGMDPEVMEHIFEPFYTTKEMGKG
TGLGLATVYGIVRQNGGAISVESEPGGGSVFSIYLPRFVGESHDVRRLGEVDETLPARTTLLVDDDDAVRDITALMLRRL
GHTVITASDPDEAIHLCQQPGIVVDLILTDVIMPSMNGREMVRSILSHQKAAKVLYMSGYPADVVEGRGAVDADARLLSR
LLKLK

Specific function: Photosensitive kinase and response regulator that is involved in increased bacterial virulence upon exposure to light [H]

COG id: NA

COG function: NA

Gene ontology:

Cell location: Integral Membrane Protein. Inner Membrane [C]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Contains 1 response regulatory domain [H]

Homologues:

Organism=Escherichia coli, GI1788549, Length=388, Percent_Identity=27.5773195876289, Blast_Score=120, Evalue=3e-28,
Organism=Escherichia coli, GI1790436, Length=249, Percent_Identity=33.3333333333333, Blast_Score=117, Evalue=2e-27,
Organism=Escherichia coli, GI1788713, Length=359, Percent_Identity=25.3481894150418, Blast_Score=90, Evalue=6e-19,
Organism=Escherichia coli, GI145693157, Length=277, Percent_Identity=25.6317689530686, Blast_Score=80, Evalue=3e-16,
Organism=Escherichia coli, GI48994928, Length=393, Percent_Identity=27.2264631043257, Blast_Score=80, Evalue=5e-16,
Organism=Escherichia coli, GI87081816, Length=256, Percent_Identity=27.734375, Blast_Score=77, Evalue=3e-15,
Organism=Escherichia coli, GI1790346, Length=243, Percent_Identity=28.8065843621399, Blast_Score=74, Evalue=3e-14,
Organism=Escherichia coli, GI1790300, Length=338, Percent_Identity=27.2189349112426, Blast_Score=69, Evalue=1e-12,
Organism=Escherichia coli, GI1790567, Length=293, Percent_Identity=27.9863481228669, Blast_Score=68, Evalue=2e-12,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR003594
- InterPro:   IPR011006
- InterPro:   IPR001610
- InterPro:   IPR000014
- InterPro:   IPR000700
- InterPro:   IPR013767
- InterPro:   IPR004358
- InterPro:   IPR003661
- InterPro:   IPR005467
- InterPro:   IPR009082
- InterPro:   IPR001789 [H]

Pfam domain/function: PF02518 HATPase_c; PF00512 HisKA; PF00989 PAS; PF00072 Response_reg [H]

EC number: =2.7.13.3 [H]

Molecular weight: Translated: 79959; Mature: 79828

Theoretical pI: Translated: 5.85; Mature: 5.85

Prosite motif: PS50885 HAMP ; PS50112 PAS ; PS50113 PAC ; PS50110 RESPONSE_REGULATORY ; PS50109 HIS_KIN

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.4 %Cys     (Translated Protein)
3.0 %Met     (Translated Protein)
3.4 %Cys+Met (Translated Protein)
0.4 %Cys     (Mature Protein)
2.9 %Met     (Mature Protein)
3.3 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MSTATLPHTVGKRLFRQTLLLALALSVVFSAVFTVVEYYRSKVSLNESVELLKKTHLDAI
CCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHH
TAALWSLDRQQIAAQIDGIHHYPFISYVAVVDQGGVVVESGTRSELFGDVRRIDLTATYN
HHHHHHHHHHHHHHHHCCCCCCHHHHHHHHCCCCCEEEECCCHHHHHHHHHEEEEEEECC
GRQVSLGSLYLEIDRQAIMRDALSTAAVTLLFQTLTITIVMLFTFMLFERQVTRHLAAAA
CCEEEECCEEEEHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
DYFTSFGFARVQQPLQLDKHRYGDEIDALVEAFNRMRESLAVAYQQQQGMLQAVRESEAL
HHHHHCCHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
LRAIARRIPNGGVWVVDTDGRYIMFEGSLVESLGLSGQEALGRMPGDLFGEPLADRLVGC
HHHHHHHCCCCCEEEEECCCCEEEEECCHHHHHCCCCHHHHCCCCHHHCCCCHHHHHHHH
YRLALAGGTLSEEIEYRERVLWIQFAPLEDEHGAVMAAVALGIDVTERRQAEAERREMLQ
HHHHHCCCCHHHHHHHHHEEEEEEEECCCCCCCHHHHHHHHCCCHHHHHHHHHHHHHHHH
RLGQAHKMEAVGRLAGGIAHDYNNKLTVILGYAHVLKLTGFQSKEAPEQLDQIIRAAEHS
HHHHHHHHHHHHHHHCCHHHCCCCCEEEEEEHHHHHHHCCCCCCCCHHHHHHHHHHHHHH
RDITRQLLAFTRSERVNPVRVDLNRLISQSSKSLTRLIGEDITLSHVAGADLWPVRIDPT
HHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHCCCCEEHHCCCCCEEEEEECCC
QADQLLMNLVMNARDAIAGTGSVTIATSNVVLDRATVRHLQGASPGEYVLMTVSDTGCGM
HHHHHHHHHHHHHHHHHCCCCCEEEEECCHHHHHHHHHHHCCCCCCCEEEEEEECCCCCC
DPEVMEHIFEPFYTTKEMGKGTGLGLATVYGIVRQNGGAISVESEPGGGSVFSIYLPRFV
CHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHCCCCEEEEECCCCCCCEEEEEHHHHC
GESHDVRRLGEVDETLPARTTLLVDDDDAVRDITALMLRRLGHTVITASDPDEAIHLCQQ
CCCCHHHHHHHHHHCCCCCEEEEECCCHHHHHHHHHHHHHCCCEEEECCCHHHHHHHHCC
PGIVVDLILTDVIMPSMNGREMVRSILSHQKAAKVLYMSGYPADVVEGRGAVDADARLLS
CCHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHEEEECCCCHHHHCCCCCCCHHHHHHH
RLLKLK
HHHCCC
>Mature Secondary Structure 
STATLPHTVGKRLFRQTLLLALALSVVFSAVFTVVEYYRSKVSLNESVELLKKTHLDAI
CCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHH
TAALWSLDRQQIAAQIDGIHHYPFISYVAVVDQGGVVVESGTRSELFGDVRRIDLTATYN
HHHHHHHHHHHHHHHHCCCCCCHHHHHHHHCCCCCEEEECCCHHHHHHHHHEEEEEEECC
GRQVSLGSLYLEIDRQAIMRDALSTAAVTLLFQTLTITIVMLFTFMLFERQVTRHLAAAA
CCEEEECCEEEEHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
DYFTSFGFARVQQPLQLDKHRYGDEIDALVEAFNRMRESLAVAYQQQQGMLQAVRESEAL
HHHHHCCHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
LRAIARRIPNGGVWVVDTDGRYIMFEGSLVESLGLSGQEALGRMPGDLFGEPLADRLVGC
HHHHHHHCCCCCEEEEECCCCEEEEECCHHHHHCCCCHHHHCCCCHHHCCCCHHHHHHHH
YRLALAGGTLSEEIEYRERVLWIQFAPLEDEHGAVMAAVALGIDVTERRQAEAERREMLQ
HHHHHCCCCHHHHHHHHHEEEEEEEECCCCCCCHHHHHHHHCCCHHHHHHHHHHHHHHHH
RLGQAHKMEAVGRLAGGIAHDYNNKLTVILGYAHVLKLTGFQSKEAPEQLDQIIRAAEHS
HHHHHHHHHHHHHHHCCHHHCCCCCEEEEEEHHHHHHHCCCCCCCCHHHHHHHHHHHHHH
RDITRQLLAFTRSERVNPVRVDLNRLISQSSKSLTRLIGEDITLSHVAGADLWPVRIDPT
HHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHCCCCEEHHCCCCCEEEEEECCC
QADQLLMNLVMNARDAIAGTGSVTIATSNVVLDRATVRHLQGASPGEYVLMTVSDTGCGM
HHHHHHHHHHHHHHHHHCCCCCEEEEECCHHHHHHHHHHHCCCCCCCEEEEEEECCCCCC
DPEVMEHIFEPFYTTKEMGKGTGLGLATVYGIVRQNGGAISVESEPGGGSVFSIYLPRFV
CHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHCCCCEEEEECCCCCCCEEEEEHHHHC
GESHDVRRLGEVDETLPARTTLLVDDDDAVRDITALMLRRLGHTVITASDPDEAIHLCQQ
CCCCHHHHHHHHHHCCCCCEEEEECCCHHHHHHHHHHHHHCCCEEEECCCHHHHHHHHCC
PGIVVDLILTDVIMPSMNGREMVRSILSHQKAAKVLYMSGYPADVVEGRGAVDADARLLS
CCHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHEEEECCCCHHHHCCCCCCCHHHHHHH
RLLKLK
HHHCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 6.0

TargetDB status: NA

Availability: NA

References: NA