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The map label for this gene is yeiE [H]

Identifier: 39996370

GI number: 39996370

Start: 1379856

End: 1380863

Strand: Reverse

Name: yeiE [H]

Synonym: GSU1268

Alternate gene names: 39996370

Gene position: 1380863-1379856 (Counterclockwise)

Preceding gene: 39996371

Following gene: 39996367

Centisome position: 36.2

GC content: 57.64

Gene sequence:

>1008_bases
ATGGAAACTGTCTACTTCAAGACCCTGCTTGCGGTAGTGGAGACGGGGAGTTTTTCGCGGGCGGCCGAACGGTTATGCAT
TACCCAGTCGGCGGTATCCCAGCGAATCAAGCTTCTGGAAGGAAGGTATGGCTACACGCTGATTGACCGGGCGGGGAACT
TTCTGGTGCCGACCGCTGCAGGAGAACTGGTCATCCAGAAGGCCCGGGTAATCATCGAGCATGAGCTGGCACTCCTGGGA
GCTCTCAAACTGTTGCCCGCCAAAACGGTCATTTCCTTCTGCTGCTCTCCCTGCTTCGGCACCGTCTTCCTCCCTGCGCT
CGTGCGTGATTTTGTTCTCAGAAATTCAGAACAGATCGATTTTAGGTGTGTTCTCGGCTCCAGCCAGGGAGCGGTCAGGG
GATTGCGCGACACGGATTTCAATATCATCGTGATCGAGCACTGCACCCCGCTGGATCTTTCGCCATACGACGTAATTTCC
CTGCCAAATGACGAGATCATTTTTGTCAGCAACCCGGCAACAGGACTCGACGTGCCGGAGCCTGACCTGTCACAGTTGCT
TAACCTGCCAGTAATCATGAGAAAGGAGGGATGCAGCGGCACCGAACAGCTAGCCGCCAACCTGGCCCGGTTCGGCAAGG
TGCTTGAGGATTTCAGGTCGGTCACCGGTCTCGACGACCCACGTCTCATCGTGCAGACGGTCAAGACTGAGCCGTATCTG
GCATTCGTACCCAAGAGTCTTGTTCTCAAGGAACTGGCAGAGGGAAGCCTGCGGGCGCACACGGTCAAGGGATTCAGCCA
TGCCCGCTTCCGCTCGCTCGTCACTGCCCCTAAGCGCTACAGCGACCCCTGCCGGAGCAACTTCATCAAGGCTGTCATGG
AGACAGTCTGCCATATCTCCGCGGTGTCCATGCCCGGTGACGGCCCCGGCAGCCGATGGCATAAAAAAAGGCCCTCCGGC
AGGAGGGCCCCTCTGAACAGTGCCGTCACGAACAACGCGGCTATTTGA

Upstream 100 bases:

>100_bases
TCCCCTCCCACCCCTCACCTGAGATCATTCAGCGTCAACAACCACTTTCGGCACGCATTTTGTAAAAAAATTTAATAAAT
TTATTTCAAGGTTAATACCT

Downstream 100 bases:

>100_bases
TGATGTCGCCGATGCTTCCCCAGCGTACGCGGAACTTTTCCCGGTCCCAGGACCAGTACTTGATGAAGGCAAGTCCCTTG
ATCTGGCTGTTCTTGACGAA

Product: LysR family transcriptional regulator

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 335; Mature: 335

Protein sequence:

>335_residues
METVYFKTLLAVVETGSFSRAAERLCITQSAVSQRIKLLEGRYGYTLIDRAGNFLVPTAAGELVIQKARVIIEHELALLG
ALKLLPAKTVISFCCSPCFGTVFLPALVRDFVLRNSEQIDFRCVLGSSQGAVRGLRDTDFNIIVIEHCTPLDLSPYDVIS
LPNDEIIFVSNPATGLDVPEPDLSQLLNLPVIMRKEGCSGTEQLAANLARFGKVLEDFRSVTGLDDPRLIVQTVKTEPYL
AFVPKSLVLKELAEGSLRAHTVKGFSHARFRSLVTAPKRYSDPCRSNFIKAVMETVCHISAVSMPGDGPGSRWHKKRPSG
RRAPLNSAVTNNAAI

Sequences:

>Translated_335_residues
METVYFKTLLAVVETGSFSRAAERLCITQSAVSQRIKLLEGRYGYTLIDRAGNFLVPTAAGELVIQKARVIIEHELALLG
ALKLLPAKTVISFCCSPCFGTVFLPALVRDFVLRNSEQIDFRCVLGSSQGAVRGLRDTDFNIIVIEHCTPLDLSPYDVIS
LPNDEIIFVSNPATGLDVPEPDLSQLLNLPVIMRKEGCSGTEQLAANLARFGKVLEDFRSVTGLDDPRLIVQTVKTEPYL
AFVPKSLVLKELAEGSLRAHTVKGFSHARFRSLVTAPKRYSDPCRSNFIKAVMETVCHISAVSMPGDGPGSRWHKKRPSG
RRAPLNSAVTNNAAI
>Mature_335_residues
METVYFKTLLAVVETGSFSRAAERLCITQSAVSQRIKLLEGRYGYTLIDRAGNFLVPTAAGELVIQKARVIIEHELALLG
ALKLLPAKTVISFCCSPCFGTVFLPALVRDFVLRNSEQIDFRCVLGSSQGAVRGLRDTDFNIIVIEHCTPLDLSPYDVIS
LPNDEIIFVSNPATGLDVPEPDLSQLLNLPVIMRKEGCSGTEQLAANLARFGKVLEDFRSVTGLDDPRLIVQTVKTEPYL
AFVPKSLVLKELAEGSLRAHTVKGFSHARFRSLVTAPKRYSDPCRSNFIKAVMETVCHISAVSMPGDGPGSRWHKKRPSG
RRAPLNSAVTNNAAI

Specific function: Unknown

COG id: COG0583

COG function: function code K; Transcriptional regulator

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Contains 1 HTH lysR-type DNA-binding domain [H]

Homologues:

Organism=Escherichia coli, GI1788481, Length=286, Percent_Identity=25.8741258741259, Blast_Score=70, Evalue=2e-13,
Organism=Escherichia coli, GI1786713, Length=64, Percent_Identity=51.5625, Blast_Score=63, Evalue=2e-11,

Paralogues:

None

Copy number: 10-20 Molecules/Cell [C]

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR000847
- InterPro:   IPR005119
- InterPro:   IPR011991 [H]

Pfam domain/function: PF00126 HTH_1; PF03466 LysR_substrate [H]

EC number: NA

Molecular weight: Translated: 36669; Mature: 36669

Theoretical pI: Translated: 8.64; Mature: 8.64

Prosite motif: PS50931 HTH_LYSR

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

2.7 %Cys     (Translated Protein)
1.2 %Met     (Translated Protein)
3.9 %Cys+Met (Translated Protein)
2.7 %Cys     (Mature Protein)
1.2 %Met     (Mature Protein)
3.9 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
METVYFKTLLAVVETGSFSRAAERLCITQSAVSQRIKLLEGRYGYTLIDRAGNFLVPTAA
CCHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHCCCCCEEEEECCCCEEEECCH
GELVIQKARVIIEHELALLGALKLLPAKTVISFCCSPCFGTVFLPALVRDFVLRNSEQID
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCE
FRCVLGSSQGAVRGLRDTDFNIIVIEHCTPLDLSPYDVISLPNDEIIFVSNPATGLDVPE
EEEEECCCCCCCCCCCCCCCEEEEECCCCCCCCCCCCEEECCCCCEEEEECCCCCCCCCC
PDLSQLLNLPVIMRKEGCSGTEQLAANLARFGKVLEDFRSVTGLDDPRLIVQTVKTEPYL
HHHHHHHCCCEEEECCCCCCHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHEECCCCCEE
AFVPKSLVLKELAEGSLRAHTVKGFSHARFRSLVTAPKRYSDPCRSNFIKAVMETVCHIS
EECCHHHHHHHHHCCCHHEEECCCCHHHHHHHHHHCCHHCCCHHHHHHHHHHHHHHHHHH
AVSMPGDGPGSRWHKKRPSGRRAPLNSAVTNNAAI
EECCCCCCCCCCCCCCCCCCCCCCCCHHCCCCCCC
>Mature Secondary Structure
METVYFKTLLAVVETGSFSRAAERLCITQSAVSQRIKLLEGRYGYTLIDRAGNFLVPTAA
CCHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHCCCCCEEEEECCCCEEEECCH
GELVIQKARVIIEHELALLGALKLLPAKTVISFCCSPCFGTVFLPALVRDFVLRNSEQID
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCE
FRCVLGSSQGAVRGLRDTDFNIIVIEHCTPLDLSPYDVISLPNDEIIFVSNPATGLDVPE
EEEEECCCCCCCCCCCCCCCEEEEECCCCCCCCCCCCEEECCCCCEEEEECCCCCCCCCC
PDLSQLLNLPVIMRKEGCSGTEQLAANLARFGKVLEDFRSVTGLDDPRLIVQTVKTEPYL
HHHHHHHCCCEEEECCCCCCHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHEECCCCCEE
AFVPKSLVLKELAEGSLRAHTVKGFSHARFRSLVTAPKRYSDPCRSNFIKAVMETVCHIS
EECCHHHHHHHHHCCCHHEEECCCCHHHHHHHHHHCCHHCCCHHHHHHHHHHHHHHHHHH
AVSMPGDGPGSRWHKKRPSGRRAPLNSAVTNNAAI
EECCCCCCCCCCCCCCCCCCCCCCCCHHCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: DNA [C]

Specific reaction: Protein + DNA = Protein-DNA [C]

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 11206551; 11258796 [H]