| Definition | Geobacter sulfurreducens PCA chromosome, complete genome. |
|---|---|
| Accession | NC_002939 |
| Length | 3,814,139 |
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The map label for this gene is 39996364
Identifier: 39996364
GI number: 39996364
Start: 1374054
End: 1375049
Strand: Direct
Name: 39996364
Synonym: GSU1262
Alternate gene names: NA
Gene position: 1374054-1375049 (Clockwise)
Preceding gene: 39996363
Following gene: 39996368
Centisome position: 36.03
GC content: 62.15
Gene sequence:
>996_bases GTGATCCTTCACCCGGCCGTCATCGCCCTGTTCGTCGGTTCGCTCCTGACCAGCGGCATGCTCGTGGCGACGGCGTTCTT CGCGGTTAAGATCCTGCGCCACTGGGACCTTGCCAGCGGCAGCGAACGGCAGCTTTCGTTCGAGCGCCGTACCTACCTTC TTGCCACAATCATGACCTGCTGCTGCGTGTTCCAGCTCCTGTCCCTGTTTCTCTTCATTCACGTGGCCGACAGCCTGAGC GCGCTCTTTCCCGGAGCCATGTGCGCGGCAGGGACCCTCAACCTGAATCGTTTCGGGTACCCTACGCTGGTCCTTAAAAT AACCACTTTTCTGCTGGCCGGTTTCTGGCTCATCCTCAATCATGCGGACAACCAGGGATATGATTATCCCCTCATCCGGA TCAAATACTCGCTGCTGCTGGTGATAACGCCGCTGCTGCTGGCCGAGACGGGACTGCAGGGGGGGTATTTTCTCTCCTTG CAGCCCCGGGTGATCACGTCATGCTGCGGGAGCCTGTTCGGCGGGGAGTCGAGCGGCATGGTTCCAACCCTGACTACCCT GGGGGATGTTCCGGCGCTCGCCACGTTGGGAGGAGTCTTAACGCTCACCCTGATCTGCGGGGGGATCTACCTGTGGCTGG GAAGGATGGGGTACCTGTTTGCCGCGTTATCCGCCGCAACCTTCGCCGTCGGCGTGGTGGGGCTGCTCTCGGCGATCCCG GTCTACATCTATGCCCTTCCCACCCACCACTGCCCCTTCTGCATGCTGCACCGCGAATACGGGCATGTGGGCTATCTCCT CTACGCGACCCTGCTTGGCGGTGGGGTGGCGGGGGTGGGTATGGGAGGGCTCCAGCCCTTCAGGCGGGTGGCGAGCCTGG CATCGTCGCTTCCTATGCTCCAGCGCCGTCTGGTCCTTTTCGCCATGGTCTGCTACGGGCTGTTCGGAGGGATCGCGGCC TGGCAGGTGATGGTTTCCGAGTTACGGCTCGTGTAG
Upstream 100 bases:
>100_bases CCATCATCATGGCGAGCCACGATCCGCTGGTGATCGACGCGGGGCTGGTCGACCGGATTGTGGCCATCCGCGACGGCAGG CTGGCCGACGGGGCGGCCCC
Downstream 100 bases:
>100_bases CGGACAGACCTTCAGGCAATGAAAAAAGCCCGGATCGCTCCGGGCTTTTTCGTGCATGGCGGGACACAGGCGCTATTTCG CTTTGGGGAGTTCCAGTTTC
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 331; Mature: 331
Protein sequence:
>331_residues MILHPAVIALFVGSLLTSGMLVATAFFAVKILRHWDLASGSERQLSFERRTYLLATIMTCCCVFQLLSLFLFIHVADSLS ALFPGAMCAAGTLNLNRFGYPTLVLKITTFLLAGFWLILNHADNQGYDYPLIRIKYSLLLVITPLLLAETGLQGGYFLSL QPRVITSCCGSLFGGESSGMVPTLTTLGDVPALATLGGVLTLTLICGGIYLWLGRMGYLFAALSAATFAVGVVGLLSAIP VYIYALPTHHCPFCMLHREYGHVGYLLYATLLGGGVAGVGMGGLQPFRRVASLASSLPMLQRRLVLFAMVCYGLFGGIAA WQVMVSELRLV
Sequences:
>Translated_331_residues MILHPAVIALFVGSLLTSGMLVATAFFAVKILRHWDLASGSERQLSFERRTYLLATIMTCCCVFQLLSLFLFIHVADSLS ALFPGAMCAAGTLNLNRFGYPTLVLKITTFLLAGFWLILNHADNQGYDYPLIRIKYSLLLVITPLLLAETGLQGGYFLSL QPRVITSCCGSLFGGESSGMVPTLTTLGDVPALATLGGVLTLTLICGGIYLWLGRMGYLFAALSAATFAVGVVGLLSAIP VYIYALPTHHCPFCMLHREYGHVGYLLYATLLGGGVAGVGMGGLQPFRRVASLASSLPMLQRRLVLFAMVCYGLFGGIAA WQVMVSELRLV >Mature_331_residues MILHPAVIALFVGSLLTSGMLVATAFFAVKILRHWDLASGSERQLSFERRTYLLATIMTCCCVFQLLSLFLFIHVADSLS ALFPGAMCAAGTLNLNRFGYPTLVLKITTFLLAGFWLILNHADNQGYDYPLIRIKYSLLLVITPLLLAETGLQGGYFLSL QPRVITSCCGSLFGGESSGMVPTLTTLGDVPALATLGGVLTLTLICGGIYLWLGRMGYLFAALSAATFAVGVVGLLSAIP VYIYALPTHHCPFCMLHREYGHVGYLLYATLLGGGVAGVGMGGLQPFRRVASLASSLPMLQRRLVLFAMVCYGLFGGIAA WQVMVSELRLV
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 35621; Mature: 35621
Theoretical pI: Translated: 8.54; Mature: 8.54
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
3.0 %Cys (Translated Protein) 3.3 %Met (Translated Protein) 6.3 %Cys+Met (Translated Protein) 3.0 %Cys (Mature Protein) 3.3 %Met (Mature Protein) 6.3 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MILHPAVIALFVGSLLTSGMLVATAFFAVKILRHWDLASGSERQLSFERRTYLLATIMTC CCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHH CCVFQLLSLFLFIHVADSLSALFPGAMCAAGTLNLNRFGYPTLVLKITTFLLAGFWLILN HHHHHHHHHHHHHHHHHHHHHHCCCHHHHCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHC HADNQGYDYPLIRIKYSLLLVITPLLLAETGLQGGYFLSLQPRVITSCCGSLFGGESSGM CCCCCCCCCCHHHHHHHHHHHHHHHHHHHCCCCCCEEEEECHHHHHHHHHHHCCCCCCCC VPTLTTLGDVPALATLGGVLTLTLICGGIYLWLGRMGYLFAALSAATFAVGVVGLLSAIP CCHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH VYIYALPTHHCPFCMLHREYGHVGYLLYATLLGGGVAGVGMGGLQPFRRVASLASSLPML HHHHCCCCCCCCHHHHHHHHCHHHHHHHHHHHCCCHHHCCCCCHHHHHHHHHHHHHHHHH QRRLVLFAMVCYGLFGGIAAWQVMVSELRLV HHHHHHHHHHHHHHHHHHHHHHHHHHHHHCC >Mature Secondary Structure MILHPAVIALFVGSLLTSGMLVATAFFAVKILRHWDLASGSERQLSFERRTYLLATIMTC CCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHH CCVFQLLSLFLFIHVADSLSALFPGAMCAAGTLNLNRFGYPTLVLKITTFLLAGFWLILN HHHHHHHHHHHHHHHHHHHHHHCCCHHHHCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHC HADNQGYDYPLIRIKYSLLLVITPLLLAETGLQGGYFLSLQPRVITSCCGSLFGGESSGM CCCCCCCCCCHHHHHHHHHHHHHHHHHHHCCCCCCEEEEECHHHHHHHHHHHCCCCCCCC VPTLTTLGDVPALATLGGVLTLTLICGGIYLWLGRMGYLFAALSAATFAVGVVGLLSAIP CCHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH VYIYALPTHHCPFCMLHREYGHVGYLLYATLLGGGVAGVGMGGLQPFRRVASLASSLPML HHHHCCCCCCCCHHHHHHHHCHHHHHHHHHHHCCCHHHCCCCCHHHHHHHHHHHHHHHHH QRRLVLFAMVCYGLFGGIAAWQVMVSELRLV HHHHHHHHHHHHHHHHHHHHHHHHHHHHHCC
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA