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The map label for this gene is 39996338

Identifier: 39996338

GI number: 39996338

Start: 1338075

End: 1339094

Strand: Reverse

Name: 39996338

Synonym: GSU1236

Alternate gene names: NA

Gene position: 1339094-1338075 (Counterclockwise)

Preceding gene: 39996339

Following gene: 39996337

Centisome position: 35.11

GC content: 60.78

Gene sequence:

>1020_bases
GTGATCATCAAGTCGATCTCCCTGATGCACGACCGGGGCAACGGCCTCGGCGGGGGATTCGCCGCCTACGGCATCTACCC
GGACTTCAAGGAGTTCTTCGCCTTCCATCTCATGTACGAGAACGGCATGGCCTTGCAGCTGACCGAGGAATACCTGGAGC
GCCACTTCTTTGTGGAGCACTACGAGGAGATTCCCACCCGCCGCACCCCGGCCATAGTCCATCCTCCCCTGTTCAAGCGC
TACTTCGTGAAGCCCTTGGAGACGCCTGAATACCGCGAGGCCATCGACTACCAGAACATGACCGACGAAGACGTGGTCGT
GCGCCACGTAATGGCGATCAACAACGAAATCGAAGGCGCCTTTGTGGTTTCCTCGGGCAAGAACATGGGGGCATTCAAGG
GCGTCGGCTACCCCGAAGAGATCGCCGACTTCTTCCGCCTCGAAGAGTACACGGGGTATATATGGACCGCCCATAACCGG
TTCCCGACCAACACCCCGGGCTGGTGGGGCGGCGCCCACCCCTTCACGCTGCTCGACTGGTCCATCGTCCATAACGGCGA
AATCTCGTCCTACGGCATCAACAAGCGCTACCTGGAGATGTATGGATACGTCTGCACCATGCTGACCGACACCGAGGTCG
TCGCCTACACCCTCGACCTTCTGATCCGCAAGCACGGCCTGACACCCGAACTTGCAAGCCTTGCCATGGCCGCCCCCTTC
TGGGACATGATCGACGGGCTTCCCGACGACGAGCGCCAGCTTCTCACCGCCATCCGCCAGGTTTACGGCAGCGCGCTTCT
CAATGGCCCCTTTGCCATCCTCTTCGCCAGCAACGAAGGGCTCATCGGCCTCAATGACCGGGTCAAGCTGCGGCCGCTGG
TCTGCGCCACCAAGGACGACTTCGTGTACATGGCATCCGAAGAGGCTGCAATCCGTGAGATCTGCCCGGCACCAGACAAG
GTATGGTCACCCCGCGGCGGTGAACCGGTGATCGTCAAGATGCAGCCGGGCGTCATCTAA

Upstream 100 bases:

>100_bases
ACAGACAACGCGGAAACCGACGCATAACTTCCAGAAGGACATCTCCAACTGCGGCCTGACCGGCTTCATATCCACGGCGG
GAAACCTCGTGGAGGGAAGC

Downstream 100 bases:

>100_bases
ACCATCGGGACCAGGAACCGGATATCCATTGCTCCGAGCCTGCCCCTTCAGGAGAGGTTTGTATTATGAACATTAACGCA
CAGGGTCTTTACTACCGGGA

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 339; Mature: 339

Protein sequence:

>339_residues
MIIKSISLMHDRGNGLGGGFAAYGIYPDFKEFFAFHLMYENGMALQLTEEYLERHFFVEHYEEIPTRRTPAIVHPPLFKR
YFVKPLETPEYREAIDYQNMTDEDVVVRHVMAINNEIEGAFVVSSGKNMGAFKGVGYPEEIADFFRLEEYTGYIWTAHNR
FPTNTPGWWGGAHPFTLLDWSIVHNGEISSYGINKRYLEMYGYVCTMLTDTEVVAYTLDLLIRKHGLTPELASLAMAAPF
WDMIDGLPDDERQLLTAIRQVYGSALLNGPFAILFASNEGLIGLNDRVKLRPLVCATKDDFVYMASEEAAIREICPAPDK
VWSPRGGEPVIVKMQPGVI

Sequences:

>Translated_339_residues
MIIKSISLMHDRGNGLGGGFAAYGIYPDFKEFFAFHLMYENGMALQLTEEYLERHFFVEHYEEIPTRRTPAIVHPPLFKR
YFVKPLETPEYREAIDYQNMTDEDVVVRHVMAINNEIEGAFVVSSGKNMGAFKGVGYPEEIADFFRLEEYTGYIWTAHNR
FPTNTPGWWGGAHPFTLLDWSIVHNGEISSYGINKRYLEMYGYVCTMLTDTEVVAYTLDLLIRKHGLTPELASLAMAAPF
WDMIDGLPDDERQLLTAIRQVYGSALLNGPFAILFASNEGLIGLNDRVKLRPLVCATKDDFVYMASEEAAIREICPAPDK
VWSPRGGEPVIVKMQPGVI
>Mature_339_residues
MIIKSISLMHDRGNGLGGGFAAYGIYPDFKEFFAFHLMYENGMALQLTEEYLERHFFVEHYEEIPTRRTPAIVHPPLFKR
YFVKPLETPEYREAIDYQNMTDEDVVVRHVMAINNEIEGAFVVSSGKNMGAFKGVGYPEEIADFFRLEEYTGYIWTAHNR
FPTNTPGWWGGAHPFTLLDWSIVHNGEISSYGINKRYLEMYGYVCTMLTDTEVVAYTLDLLIRKHGLTPELASLAMAAPF
WDMIDGLPDDERQLLTAIRQVYGSALLNGPFAILFASNEGLIGLNDRVKLRPLVCATKDDFVYMASEEAAIREICPAPDK
VWSPRGGEPVIVKMQPGVI

Specific function: Unknown

COG id: COG0067

COG function: function code E; Glutamate synthase domain 1

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Contains 1 glutamine amidotransferase type-2 domain [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR000583
- InterPro:   IPR017932
- InterPro:   IPR012375 [H]

Pfam domain/function: PF00310 GATase_2 [H]

EC number: NA

Molecular weight: Translated: 38458; Mature: 38458

Theoretical pI: Translated: 4.83; Mature: 4.83

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.9 %Cys     (Translated Protein)
3.8 %Met     (Translated Protein)
4.7 %Cys+Met (Translated Protein)
0.9 %Cys     (Mature Protein)
3.8 %Met     (Mature Protein)
4.7 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MIIKSISLMHDRGNGLGGGFAAYGIYPDFKEFFAFHLMYENGMALQLTEEYLERHFFVEH
CEECCEEHEECCCCCCCCCEEEECCCCCHHHHHHHHHHCCCCCEEEEHHHHHHHHHHHHH
YEEIPTRRTPAIVHPPLFKRYFVKPLETPEYREAIDYQNMTDEDVVVRHVMAINNEIEGA
HHHCCCCCCCCEECCHHHHHHHCCCCCCCHHHHHHCCCCCCCHHHHHHHHHHHCCCCCEE
FVVSSGKNMGAFKGVGYPEEIADFFRLEEYTGYIWTAHNRFPTNTPGWWGGAHPFTLLDW
EEEECCCCCCCCCCCCCHHHHHHHHHHHHHCCEEEEECCCCCCCCCCCCCCCCCCEEEEE
SIVHNGEISSYGINKRYLEMYGYVCTMLTDTEVVAYTLDLLIRKHGLTPELASLAMAAPF
EEEECCCCCCCCCCHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHCCCCHHHHHHHHHCCH
WDMIDGLPDDERQLLTAIRQVYGSALLNGPFAILFASNEGLIGLNDRVKLRPLVCATKDD
HHHHCCCCCHHHHHHHHHHHHHHHHHCCCCEEEEEECCCCEEECCCCEEEEEEEEECCCC
FVYMASEEAAIREICPAPDKVWSPRGGEPVIVKMQPGVI
EEEEECCCHHHHHHCCCCCHHCCCCCCCEEEEEECCCCC
>Mature Secondary Structure
MIIKSISLMHDRGNGLGGGFAAYGIYPDFKEFFAFHLMYENGMALQLTEEYLERHFFVEH
CEECCEEHEECCCCCCCCCEEEECCCCCHHHHHHHHHHCCCCCEEEEHHHHHHHHHHHHH
YEEIPTRRTPAIVHPPLFKRYFVKPLETPEYREAIDYQNMTDEDVVVRHVMAINNEIEGA
HHHCCCCCCCCEECCHHHHHHHCCCCCCCHHHHHHCCCCCCCHHHHHHHHHHHCCCCCEE
FVVSSGKNMGAFKGVGYPEEIADFFRLEEYTGYIWTAHNRFPTNTPGWWGGAHPFTLLDW
EEEECCCCCCCCCCCCCHHHHHHHHHHHHHCCEEEEECCCCCCCCCCCCCCCCCCEEEEE
SIVHNGEISSYGINKRYLEMYGYVCTMLTDTEVVAYTLDLLIRKHGLTPELASLAMAAPF
EEEECCCCCCCCCCHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHCCCCHHHHHHHHHCCH
WDMIDGLPDDERQLLTAIRQVYGSALLNGPFAILFASNEGLIGLNDRVKLRPLVCATKDD
HHHHCCCCCHHHHHHHHHHHHHHHHHCCCCEEEEEECCCCEEECCCCEEEEEEEEECCCC
FVYMASEEAAIREICPAPDKVWSPRGGEPVIVKMQPGVI
EEEEECCCHHHHHHCCCCCHHCCCCCCCEEEEEECCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 10360571 [H]