Click here to switch to the map view.

The map label for this gene is 39996334

Identifier: 39996334

GI number: 39996334

Start: 1335282

End: 1335674

Strand: Direct

Name: 39996334

Synonym: GSU1232

Alternate gene names: NA

Gene position: 1335282-1335674 (Clockwise)

Preceding gene: 39996333

Following gene: 39996336

Centisome position: 35.01

GC content: 59.29

Gene sequence:

>393_bases
ATGGCTGGCAAGGAGATAACGGTTACTTTCTATCGGCAGAACCACGTGCGGGACAACTGGAAGGTCGATTTGCAGGGGGC
CGAGTCGCAACGTTTTTTCGGCACGCTGGCCGACGATCTCTCCCGCAGCGGGGTTATCCTCAAGCAGGCAGTCAACGACG
GTTTCACCATCGACATCAACAGTTACGGCGACCTGCTCAACTCGATCCGGATTTCGTCGCCGACCGACGGTTTCGCCAAC
GTGTGTATTGGCCACGTCATCGGTCAGAGCCCGAATCTCGACCTGCTGGACGATATCAGGCGCGCCGTGACGCGCATAGC
TTTTGCCCCGGAAACCGTCCCTCCCGAGGACCATAACCGCAAGGTCTGCCACAACTGCGGCTGCGGCTGCTGA

Upstream 100 bases:

>100_bases
AAGTATGAGGCCGGCCAGAAAGCAGTGCTCGACATGGTATTGGGGTCACTGCAGCGCAAGACGTCGGAAGCGGTATGCGG
GTAACGAAGGAGGCCATGGG

Downstream 100 bases:

>100_bases
TTCAGCCCTTTCAGGGAAGCACGGCAGGGAGGATTTCCGCCGTGATGGAGCCGTCGGTAAGGGTTACAACGGCATAGGTA
AGGTTGCCGGCTCCCCGCTT

Product: hypothetical protein

Products: NA

Alternate protein names: None

Number of amino acids: Translated: 130; Mature: 129

Protein sequence:

>130_residues
MAGKEITVTFYRQNHVRDNWKVDLQGAESQRFFGTLADDLSRSGVILKQAVNDGFTIDINSYGDLLNSIRISSPTDGFAN
VCIGHVIGQSPNLDLLDDIRRAVTRIAFAPETVPPEDHNRKVCHNCGCGC

Sequences:

>Translated_130_residues
MAGKEITVTFYRQNHVRDNWKVDLQGAESQRFFGTLADDLSRSGVILKQAVNDGFTIDINSYGDLLNSIRISSPTDGFAN
VCIGHVIGQSPNLDLLDDIRRAVTRIAFAPETVPPEDHNRKVCHNCGCGC
>Mature_129_residues
AGKEITVTFYRQNHVRDNWKVDLQGAESQRFFGTLADDLSRSGVILKQAVNDGFTIDINSYGDLLNSIRISSPTDGFANV
CIGHVIGQSPNLDLLDDIRRAVTRIAFAPETVPPEDHNRKVCHNCGCGC

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 14320; Mature: 14189

Theoretical pI: Translated: 6.08; Mature: 6.08

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

3.8 %Cys     (Translated Protein)
0.8 %Met     (Translated Protein)
4.6 %Cys+Met (Translated Protein)
3.9 %Cys     (Mature Protein)
0.0 %Met     (Mature Protein)
3.9 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MAGKEITVTFYRQNHVRDNWKVDLQGAESQRFFGTLADDLSRSGVILKQAVNDGFTIDIN
CCCCEEEEEEEECCCCCCCEEEEECCCCCCHHHHHHHHHHCCCCEEEEECCCCCEEEEEC
SYGDLLNSIRISSPTDGFANVCIGHVIGQSPNLDLLDDIRRAVTRIAFAPETVPPEDHNR
CHHHHHHHEECCCCCCHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHCCCCCCCCCCCCC
KVCHNCGCGC
CHHCCCCCCC
>Mature Secondary Structure 
AGKEITVTFYRQNHVRDNWKVDLQGAESQRFFGTLADDLSRSGVILKQAVNDGFTIDIN
CCCEEEEEEEECCCCCCCEEEEECCCCCCHHHHHHHHHHCCCCEEEEECCCCCEEEEEC
SYGDLLNSIRISSPTDGFANVCIGHVIGQSPNLDLLDDIRRAVTRIAFAPETVPPEDHNR
CHHHHHHHEECCCCCCHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHCCCCCCCCCCCCC
KVCHNCGCGC
CHHCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA