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The map label for this gene is yajD [H]

Identifier: 39996313

GI number: 39996313

Start: 1314048

End: 1314314

Strand: Direct

Name: yajD [H]

Synonym: GSU1211

Alternate gene names: 39996313

Gene position: 1314048-1314314 (Clockwise)

Preceding gene: 39996312

Following gene: 39996316

Centisome position: 34.45

GC content: 64.42

Gene sequence:

>267_bases
ATGGTGCGGCGCATGCGCGCGGAACAGTCCGGCCCCGGCAGCTACCGGGAGCAGTCGCTGAAGATCCACGGCTGGATCTG
CGCAAAGTGCGGCCGGGAGTTTGAGCTCAACAACCTGCACTTGCTCACGGTGCACCACCGGGACGGCAACCACCACAACA
ATCCCCCCGATGGCAGCAACTGGGAGAACCTCTGCGTCTGGTGCCACGACGACGAGCACAGCCGCGGCGTACTGGGGGAC
TACCTGGACGACCGCAGCAAAAAGTGA

Upstream 100 bases:

>100_bases
GGTACCGCCGCCGATCAACGGGAGGCGTGAGATGGGGCAGTCATTCCGGCCCCGCAGACCCGGCAAGCCCCCCGTGCGCA
GCGATGCCGAGCTCGATGAA

Downstream 100 bases:

>100_bases
GCGGGCGACTGCCACGTCAGGAAGTAAAAAGGCCCTGGTTTCCCGGGGCCTTTACTGTTCGAAGGGGTAAAAGGGTAAGA
ATCGTCGAGGCGGCTATTTT

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 88; Mature: 88

Protein sequence:

>88_residues
MVRRMRAEQSGPGSYREQSLKIHGWICAKCGREFELNNLHLLTVHHRDGNHHNNPPDGSNWENLCVWCHDDEHSRGVLGD
YLDDRSKK

Sequences:

>Translated_88_residues
MVRRMRAEQSGPGSYREQSLKIHGWICAKCGREFELNNLHLLTVHHRDGNHHNNPPDGSNWENLCVWCHDDEHSRGVLGD
YLDDRSKK
>Mature_88_residues
MVRRMRAEQSGPGSYREQSLKIHGWICAKCGREFELNNLHLLTVHHRDGNHHNNPPDGSNWENLCVWCHDDEHSRGVLGD
YLDDRSKK

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

Organism=Escherichia coli, GI1786611, Length=66, Percent_Identity=59.0909090909091, Blast_Score=89, Evalue=4e-20,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR002711
- InterPro:   IPR003615
- InterPro:   IPR015880 [H]

Pfam domain/function: PF01844 HNH [H]

EC number: NA

Molecular weight: Translated: 10261; Mature: 10261

Theoretical pI: Translated: 7.23; Mature: 7.23

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

4.5 %Cys     (Translated Protein)
2.3 %Met     (Translated Protein)
6.8 %Cys+Met (Translated Protein)
4.5 %Cys     (Mature Protein)
2.3 %Met     (Mature Protein)
6.8 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MVRRMRAEQSGPGSYREQSLKIHGWICAKCGREFELNNLHLLTVHHRDGNHHNNPPDGSN
CCCCCCCCCCCCCCCCCCEEEEEEEEEECCCCEECCCCEEEEEEECCCCCCCCCCCCCCC
WENLCVWCHDDEHSRGVLGDYLDDRSKK
CCEEEEEEECCCCCCCCCCCCCCCCCCC
>Mature Secondary Structure
MVRRMRAEQSGPGSYREQSLKIHGWICAKCGREFELNNLHLLTVHHRDGNHHNNPPDGSN
CCCCCCCCCCCCCCCCCCEEEEEEEEEECCCCEECCCCEEEEEEECCCCCCCCCCCCCCC
WENLCVWCHDDEHSRGVLGDYLDDRSKK
CCEEEEEEECCCCCCCCCCCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 11206551; 11258796 [H]