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The map label for this gene is 39996301

Identifier: 39996301

GI number: 39996301

Start: 1302927

End: 1303490

Strand: Direct

Name: 39996301

Synonym: GSU1199

Alternate gene names: NA

Gene position: 1302927-1303490 (Clockwise)

Preceding gene: 39996300

Following gene: 39996302

Centisome position: 34.16

GC content: 63.48

Gene sequence:

>564_bases
ATGAAGAACACGCTCTGGCTCGGGGTGACGCTCCTGCTTATGGGGCTCATCCTGGCGCTCTACCTGCTTACCCCCGAGCG
GTCTCCAGGACCGCTGAAATCCTCCGTCCCCCCCGCCGGGGACCGGGTTATCACGGTGAAGGACGGCGACACGGTGGTCA
TCGCCCCGGCAGGGGGCGGCAAGCCTTACCCCTGCAGACTCTACGGCATTGATACGCCCGAAACTCCGAAAAAACGGAAA
CAGGGGCAGCCGTACGGACAGGAAGCGGCCGACGAGCTGAGCTCTCTCGTGCTCGGCAAGGAGGTGAAGGTTCTCCTGAC
CGGCGACACGACCTATAATCGCCAGGTGGGGACTATCGAGGTGGATGGGGTGAACGTGAATCTGGAGATGGTGCGTCGGG
GTTATGCCTGGGCCTATGTCCAGTACCTGCGGAGGCCCCACGTGTCCGAGTACCGCGAGGCCGAAGAGGACGCGCGCCGG
CAACGGCTCGGGCTCTGGCAGGATCACAACCCCGTGCCGCCATGGGAGTTTCGCAAGCGACAGAGGCTCCAGAAGCTTGA
CTAA

Upstream 100 bases:

>100_bases
GCTGCGGCTGCACCGCCTGATCCGCGGACATTCCCTTGTTTGATGTGCGGGGGCCGGTCTTCCTTTGGGGGGCCGGCCCC
TTTGCGCAGGAGGCTGACGA

Downstream 100 bases:

>100_bases
TCACTCCCTTTCGACTACTTTCTCTTGGTGCGGCTGTACCGGCCCCAACTTGCCGAAACAGCCGAAACTTTTTCGCAACG
GAGACAACGATGATCGACAA

Product: nuclease

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 187; Mature: 187

Protein sequence:

>187_residues
MKNTLWLGVTLLLMGLILALYLLTPERSPGPLKSSVPPAGDRVITVKDGDTVVIAPAGGGKPYPCRLYGIDTPETPKKRK
QGQPYGQEAADELSSLVLGKEVKVLLTGDTTYNRQVGTIEVDGVNVNLEMVRRGYAWAYVQYLRRPHVSEYREAEEDARR
QRLGLWQDHNPVPPWEFRKRQRLQKLD

Sequences:

>Translated_187_residues
MKNTLWLGVTLLLMGLILALYLLTPERSPGPLKSSVPPAGDRVITVKDGDTVVIAPAGGGKPYPCRLYGIDTPETPKKRK
QGQPYGQEAADELSSLVLGKEVKVLLTGDTTYNRQVGTIEVDGVNVNLEMVRRGYAWAYVQYLRRPHVSEYREAEEDARR
QRLGLWQDHNPVPPWEFRKRQRLQKLD
>Mature_187_residues
MKNTLWLGVTLLLMGLILALYLLTPERSPGPLKSSVPPAGDRVITVKDGDTVVIAPAGGGKPYPCRLYGIDTPETPKKRK
QGQPYGQEAADELSSLVLGKEVKVLLTGDTTYNRQVGTIEVDGVNVNLEMVRRGYAWAYVQYLRRPHVSEYREAEEDARR
QRLGLWQDHNPVPPWEFRKRQRLQKLD

Specific function: Unknown

COG id: COG1525

COG function: function code L; Micrococcal nuclease (thermonuclease) homologs

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Belongs to the thermonuclease family [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR016071
- InterPro:   IPR006021
- InterPro:   IPR002071 [H]

Pfam domain/function: PF00565 SNase [H]

EC number: NA

Molecular weight: Translated: 21109; Mature: 21109

Theoretical pI: Translated: 9.66; Mature: 9.66

Prosite motif: PS50830 TNASE_3 ; PS01095 CHITINASE_18

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.5 %Cys     (Translated Protein)
1.6 %Met     (Translated Protein)
2.1 %Cys+Met (Translated Protein)
0.5 %Cys     (Mature Protein)
1.6 %Met     (Mature Protein)
2.1 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MKNTLWLGVTLLLMGLILALYLLTPERSPGPLKSSVPPAGDRVITVKDGDTVVIAPAGGG
CCCCHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCEEEEEECCCEEEEEECCCC
KPYPCRLYGIDTPETPKKRKQGQPYGQEAADELSSLVLGKEVKVLLTGDTTYNRQVGTIE
CCCCEEEEECCCCCCCHHHHCCCCCCHHHHHHHHHHHCCCCEEEEEECCCCCCCCCCEEE
VDGVNVNLEMVRRGYAWAYVQYLRRPHVSEYREAEEDARRQRLGLWQDHNPVPPWEFRKR
ECCCEEEHHHHHHCHHHHHHHHHHCCCHHHHHHHHHHHHHHHCCCCCCCCCCCCHHHHHH
QRLQKLD
HHHHCCC
>Mature Secondary Structure
MKNTLWLGVTLLLMGLILALYLLTPERSPGPLKSSVPPAGDRVITVKDGDTVVIAPAGGG
CCCCHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCEEEEEECCCEEEEEECCCC
KPYPCRLYGIDTPETPKKRKQGQPYGQEAADELSSLVLGKEVKVLLTGDTTYNRQVGTIE
CCCCEEEEECCCCCCCHHHHCCCCCCHHHHHHHHHHHCCCCEEEEEECCCCCCCCCCEEE
VDGVNVNLEMVRRGYAWAYVQYLRRPHVSEYREAEEDARRQRLGLWQDHNPVPPWEFRKR
ECCCEEEHHHHHHCHHHHHHHHHHCCCHHHHHHHHHHHHHHHCCCCCCCCCCCCHHHHHH
QRLQKLD
HHHHCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 7542800 [H]