| Definition | Geobacter sulfurreducens PCA chromosome, complete genome. |
|---|---|
| Accession | NC_002939 |
| Length | 3,814,139 |
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The map label for this gene is agaY [C]
Identifier: 39996295
GI number: 39996295
Start: 1297385
End: 1298671
Strand: Direct
Name: agaY [C]
Synonym: GSU1193
Alternate gene names: 39996295
Gene position: 1297385-1298671 (Clockwise)
Preceding gene: 39996294
Following gene: 39996296
Centisome position: 34.02
GC content: 60.76
Gene sequence:
>1287_bases ATGACAGCTCAGTACTCCGCCGATTTCGAGAAGGCCCTGCAGGTCGGCCGTCCCCCCAACATCCGGGCTCTTTTCCCCAA CTCCAAGGCCCTCATCGTGAGCGGCAAGGTTGTGGACCGGGCCATGCTTGCAAAGGGGAAAGCCATTGCCATGGCCGCCA ACGGCCGCAACTACTTCGTCATTCGCGGAGCACTGATGGCCGCCCAGCGGGCCAACTGCCCGCTCATCATCGAAATCGCC AAGTCGGAGGGGGGGCAGAAGGCCTACTGTGCCGTTAATTACTGGAACATGGCCCGCATCGTCGACGCCCTCTGCAACGA GCTGGGGATCACTGTGCCGGTGGCTATCCATGCCGACCACTACGGCATCAAGAACGACAAGGATCTGAACGCCGCCAAGG TGGAGATCCCGACCATGTTCGAGGCGGGGATCACCTCCATCGCCATCGACGCCTCTCACCTGCCAGACGACCAGAACCTG CTGGCCAACCTGGCCATCAATCCGTTCATCCCGTCCTGGGCCGGCCTTGAGACCGAGGTGGGTGAAATCAAGGGGAACAC AGGCCTTTCCACCGTGGATGAGGCGAAATTCCTTATCCAGGGGCTCAATGCCCACGGCATCTTCCCCGACTGGATCGCCT TGAACAACGGCACCACCCACGGTCTGGAGGCGTCGGACGCCGGTATCCAGGTCGGGCTCACCGCCGAGATCCATAAGGCT TTGGAGCCCTACCGGGTCAACGGTGCCCAGCACGGCACCTCGGGCAACAGCTCCGAGCGCCTCCGCGCCATCGCCAATGA AACTGCCACCACCAAGGCCAACGTGGCCACCGCGCTCCAGATGATCTCCTGGGGGCTTGAGGTGAACGATTACGGCAATG CTCAACTTGATGCCGACGGCAATTTCATCAAGAAGTCCGATGCCGGCATGAGCGACGAGCTGTGGGCCGAGATGGTGGCC CATGCCGAAGGCAAAGGTTGGAAGAAGGGGGACTACAAGAACCTGAACCTTCCCTTTGAGAACAAACTGCTGGCGCAGCC TAGGGAGATCCGCGAGCGGATGGCCAAGGGGGTGGAAGAGTTCGCCTACAAGATGATGACCGAGGTGCTCAATGCCCGGG ACACGGCACCTTACGCCATAGAGGCGATTCTCTCGGCCGGTTCCTACGACGTGGGGGCAAAGGGAAGCCGTATAGATGAT CCGGCCCTCTGGACCGAAGCCCGGATCATCGAGCGGGCGAAATCAATTGTGGGTGACAAGGGCGCTGAAGGAAATTTCGA CGATTAG
Upstream 100 bases:
>100_bases CCGGGGCAATCGTTCCTTGATTTTACCCACCGGTCATGCTAATAACATGTTGTTTTATTTATAATAAATATGTTTGAATG CCACTAAACAGGGAGGTGCT
Downstream 100 bases:
>100_bases TATCCCGCAGCCAGCGGCGTGAAGGGGGGGCAAAAGCCCCCCCTTTTTCCGTTGCTGCTCCGGAGCAGACCATGACAAAT CTCAGTGTGTTCCTTGTTTC
Product: ketose-bisphosphate aldolase
Products: Glycerone-Phosphate; D-Glyceraldehyde 3-Phosphate. [C]
Alternate protein names: Ketose-Bisphosphate Aldolase Family Protein; Fructose-Bisphosphate Aldolase; Ketose-Bisphosphate Aldolase; Fructose-Bisphosphate Aldolase Class-II; Fructose/Tagatose Bisphosphate Aldolase-Like Protein; Ketose-Bisphosphate Aldolase Class-II Family Protein; Fructose-16-Bisphosphate Aldolase Class II
Number of amino acids: Translated: 428; Mature: 427
Protein sequence:
>428_residues MTAQYSADFEKALQVGRPPNIRALFPNSKALIVSGKVVDRAMLAKGKAIAMAANGRNYFVIRGALMAAQRANCPLIIEIA KSEGGQKAYCAVNYWNMARIVDALCNELGITVPVAIHADHYGIKNDKDLNAAKVEIPTMFEAGITSIAIDASHLPDDQNL LANLAINPFIPSWAGLETEVGEIKGNTGLSTVDEAKFLIQGLNAHGIFPDWIALNNGTTHGLEASDAGIQVGLTAEIHKA LEPYRVNGAQHGTSGNSSERLRAIANETATTKANVATALQMISWGLEVNDYGNAQLDADGNFIKKSDAGMSDELWAEMVA HAEGKGWKKGDYKNLNLPFENKLLAQPREIRERMAKGVEEFAYKMMTEVLNARDTAPYAIEAILSAGSYDVGAKGSRIDD PALWTEARIIERAKSIVGDKGAEGNFDD
Sequences:
>Translated_428_residues MTAQYSADFEKALQVGRPPNIRALFPNSKALIVSGKVVDRAMLAKGKAIAMAANGRNYFVIRGALMAAQRANCPLIIEIA KSEGGQKAYCAVNYWNMARIVDALCNELGITVPVAIHADHYGIKNDKDLNAAKVEIPTMFEAGITSIAIDASHLPDDQNL LANLAINPFIPSWAGLETEVGEIKGNTGLSTVDEAKFLIQGLNAHGIFPDWIALNNGTTHGLEASDAGIQVGLTAEIHKA LEPYRVNGAQHGTSGNSSERLRAIANETATTKANVATALQMISWGLEVNDYGNAQLDADGNFIKKSDAGMSDELWAEMVA HAEGKGWKKGDYKNLNLPFENKLLAQPREIRERMAKGVEEFAYKMMTEVLNARDTAPYAIEAILSAGSYDVGAKGSRIDD PALWTEARIIERAKSIVGDKGAEGNFDD >Mature_427_residues TAQYSADFEKALQVGRPPNIRALFPNSKALIVSGKVVDRAMLAKGKAIAMAANGRNYFVIRGALMAAQRANCPLIIEIAK SEGGQKAYCAVNYWNMARIVDALCNELGITVPVAIHADHYGIKNDKDLNAAKVEIPTMFEAGITSIAIDASHLPDDQNLL ANLAINPFIPSWAGLETEVGEIKGNTGLSTVDEAKFLIQGLNAHGIFPDWIALNNGTTHGLEASDAGIQVGLTAEIHKAL EPYRVNGAQHGTSGNSSERLRAIANETATTKANVATALQMISWGLEVNDYGNAQLDADGNFIKKSDAGMSDELWAEMVAH AEGKGWKKGDYKNLNLPFENKLLAQPREIRERMAKGVEEFAYKMMTEVLNARDTAPYAIEAILSAGSYDVGAKGSRIDDP ALWTEARIIERAKSIVGDKGAEGNFDD
Specific function: Catalyzes The Reversible Condensation Of Dihydroxyacetone Phosphate With Glyceraldehyde 3-Phosphate To Produce Tagatose 1,6-Bisphosphate. [C]
COG id: COG0191
COG function: function code G; Fructose/tagatose bisphosphate aldolase
Gene ontology:
Cell location: Cytoplasm [C]
Metaboloic importance: Unknown [C]
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: 4.1.2.- [C]
Molecular weight: Translated: 46115; Mature: 45984
Theoretical pI: Translated: 5.20; Mature: 5.20
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.7 %Cys (Translated Protein) 2.8 %Met (Translated Protein) 3.5 %Cys+Met (Translated Protein) 0.7 %Cys (Mature Protein) 2.6 %Met (Mature Protein) 3.3 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MTAQYSADFEKALQVGRPPNIRALFPNSKALIVSGKVVDRAMLAKGKAIAMAANGRNYFV CCCCCCCCHHHHHHCCCCCCEEEECCCCCEEEEECHHHHHHHHCCCCEEEEEECCCEEEE IRGALMAAQRANCPLIIEIAKSEGGQKAYCAVNYWNMARIVDALCNELGITVPVAIHADH EEHHHHHHHCCCCCEEEEEECCCCCCEEEEEEEHHHHHHHHHHHHHHCCCEEEEEEECCC YGIKNDKDLNAAKVEIPTMFEAGITSIAIDASHLPDDQNLLANLAINPFIPSWAGLETEV CCCCCCCCCCCEEEECCCHHHCCCCEEEEEHHCCCCHHHHHHHHEECCCCCCCCCCCCHH GEIKGNTGLSTVDEAKFLIQGLNAHGIFPDWIALNNGTTHGLEASDAGIQVGLTAEIHKA HHCCCCCCCCHHHHHHHHHHCCCCCCCCCCEEEECCCCCCCCCCCCCCEEEEEHHHHHHC LEPYRVNGAQHGTSGNSSERLRAIANETATTKANVATALQMISWGLEVNDYGNAQLDADG CCCEECCCCCCCCCCCHHHHHHHHHHCCCCCHHHHHHHHHHHHHCCEECCCCCEEECCCC NFIKKSDAGMSDELWAEMVAHAEGKGWKKGDYKNLNLPFENKLLAQPREIRERMAKGVEE CEEECCCCCCCHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCHHHCCHHHHHHHHHHHHHH FAYKMMTEVLNARDTAPYAIEAILSAGSYDVGAKGSRIDDPALWTEARIIERAKSIVGDK HHHHHHHHHHHCCCCCCHHHHHHHHCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHCCC GAEGNFDD CCCCCCCC >Mature Secondary Structure TAQYSADFEKALQVGRPPNIRALFPNSKALIVSGKVVDRAMLAKGKAIAMAANGRNYFV CCCCCCCHHHHHHCCCCCCEEEECCCCCEEEEECHHHHHHHHCCCCEEEEEECCCEEEE IRGALMAAQRANCPLIIEIAKSEGGQKAYCAVNYWNMARIVDALCNELGITVPVAIHADH EEHHHHHHHCCCCCEEEEEECCCCCCEEEEEEEHHHHHHHHHHHHHHCCCEEEEEEECCC YGIKNDKDLNAAKVEIPTMFEAGITSIAIDASHLPDDQNLLANLAINPFIPSWAGLETEV CCCCCCCCCCCEEEECCCHHHCCCCEEEEEHHCCCCHHHHHHHHEECCCCCCCCCCCCHH GEIKGNTGLSTVDEAKFLIQGLNAHGIFPDWIALNNGTTHGLEASDAGIQVGLTAEIHKA HHCCCCCCCCHHHHHHHHHHCCCCCCCCCCEEEECCCCCCCCCCCCCCEEEEEHHHHHHC LEPYRVNGAQHGTSGNSSERLRAIANETATTKANVATALQMISWGLEVNDYGNAQLDADG CCCEECCCCCCCCCCCHHHHHHHHHHCCCCCHHHHHHHHHHHHHCCEECCCCCEEECCCC NFIKKSDAGMSDELWAEMVAHAEGKGWKKGDYKNLNLPFENKLLAQPREIRERMAKGVEE CEEECCCCCCCHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCHHHCCHHHHHHHHHHHHHH FAYKMMTEVLNARDTAPYAIEAILSAGSYDVGAKGSRIDDPALWTEARIIERAKSIVGDK HHHHHHHHHHHCCCCCCHHHHHHHHCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHCCC GAEGNFDD CCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: D-Tagatose 1,6-Bisphosphate 1,6-Bisphosphate [C]
Specific reaction: D-Tagatose 1,6-Bisphosphate 1,6-Bisphosphate = Glycerone-Phosphate + D-Glyceraldehyde 3-Phosphate. [C]
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA