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The map label for this gene is sodA [H]

Identifier: 39996260

GI number: 39996260

Start: 1263496

End: 1264074

Strand: Direct

Name: sodA [H]

Synonym: GSU1158

Alternate gene names: 39996260

Gene position: 1263496-1264074 (Clockwise)

Preceding gene: 39996259

Following gene: 39996261

Centisome position: 33.13

GC content: 56.99

Gene sequence:

>579_bases
ATGGCCTATGAAGCAAAAGACTATTCGAAACTGATCGGGATGGCGGGATTCAGCGAGGCTCTCCTGAAGAACCATTTCAC
CCTTTATCAGGGTTATGTGACCAATACGAACAAGGTGCTCGACATCCTCGCCAAAATGCTCGCCGACGGTGCCACTGCCA
CTCCCGAGTATGCGGAGCTGAAGCGGCGCCTGGGATGGGAGTTCAACGGCATGCGGCTCCACGAGTTCTATTTCGAGAAT
CTCGGCGGCAACGGTGCCATCGACCAGGCCGGCAAGCTGGCCGCGAAAATTGTTGCCGACTTCGGCAGCTATGAGGCGTG
GGAGAAGGATTTCCGGGCCACCGGCGCCATGCGGGGTATCGGCTGGGCAGTGCTCTACCAGGATTCGGCCACCGGCAAGC
TCATTAACTTCTGGGTCAACGAGCACGACGTTGCTCATCCGGCCGGCTGCACTCCCATCCTGATCATGGATGTCTTCGAG
CATGCCTTTATGCTCGATTACGGTCTCAAGCGTCCCGACTACATCGAGGCCTTCTTCAAGAATATCGACTGGAAGGCCGC
CGAGGCACGGTTGAAATAA

Upstream 100 bases:

>100_bases
TTTATCTTTTTTGGGTTGACCTTTTTTGGATTCATGGTAAGGTTGAGACCGTGCCCGTTGGCATGTGATCCAATCAAGAC
CTGTCAAGGAGGAAGCAACC

Downstream 100 bases:

>100_bases
CCCAGTTCAGATCGGACACAGGGGGCGCTTACGGCGCCCCCTTTTTTCTTCCGGCAATCGGGAGCGTGCCGACCGGCCGC
GGCGGGACCACAGGAGGTGA

Product: superoxide dismutase

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 192; Mature: 191

Protein sequence:

>192_residues
MAYEAKDYSKLIGMAGFSEALLKNHFTLYQGYVTNTNKVLDILAKMLADGATATPEYAELKRRLGWEFNGMRLHEFYFEN
LGGNGAIDQAGKLAAKIVADFGSYEAWEKDFRATGAMRGIGWAVLYQDSATGKLINFWVNEHDVAHPAGCTPILIMDVFE
HAFMLDYGLKRPDYIEAFFKNIDWKAAEARLK

Sequences:

>Translated_192_residues
MAYEAKDYSKLIGMAGFSEALLKNHFTLYQGYVTNTNKVLDILAKMLADGATATPEYAELKRRLGWEFNGMRLHEFYFEN
LGGNGAIDQAGKLAAKIVADFGSYEAWEKDFRATGAMRGIGWAVLYQDSATGKLINFWVNEHDVAHPAGCTPILIMDVFE
HAFMLDYGLKRPDYIEAFFKNIDWKAAEARLK
>Mature_191_residues
AYEAKDYSKLIGMAGFSEALLKNHFTLYQGYVTNTNKVLDILAKMLADGATATPEYAELKRRLGWEFNGMRLHEFYFENL
GGNGAIDQAGKLAAKIVADFGSYEAWEKDFRATGAMRGIGWAVLYQDSATGKLINFWVNEHDVAHPAGCTPILIMDVFEH
AFMLDYGLKRPDYIEAFFKNIDWKAAEARLK

Specific function: Destroys radicals which are normally produced within the cells and which are toxic to biological systems [H]

COG id: COG0605

COG function: function code P; Superoxide dismutase

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the iron/manganese superoxide dismutase family [H]

Homologues:

Organism=Homo sapiens, GI67782307, Length=171, Percent_Identity=30.9941520467836, Blast_Score=72, Evalue=3e-13,
Organism=Homo sapiens, GI67782305, Length=171, Percent_Identity=30.9941520467836, Blast_Score=72, Evalue=3e-13,
Organism=Escherichia coli, GI1787946, Length=161, Percent_Identity=31.055900621118, Blast_Score=66, Evalue=2e-12,
Organism=Caenorhabditis elegans, GI17506561, Length=193, Percent_Identity=27.979274611399, Blast_Score=70, Evalue=8e-13,

Paralogues:

None

Copy number: 2020 Molecules/Cell In: Growth Phase, Minimal Media (Based on E. coli). 20 Molecules/Cell In: Stationary Phase, Rich Media (Based on E. coli). 900 Molecules/Cell In: Stationary Phase, Rich Media (Based on E. coli). [C]

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR001189
- InterPro:   IPR019832
- InterPro:   IPR019831 [H]

Pfam domain/function: PF02777 Sod_Fe_C [H]

EC number: =1.15.1.1 [H]

Molecular weight: Translated: 21639; Mature: 21508

Theoretical pI: Translated: 6.02; Mature: 6.02

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.5 %Cys     (Translated Protein)
3.6 %Met     (Translated Protein)
4.2 %Cys+Met (Translated Protein)
0.5 %Cys     (Mature Protein)
3.1 %Met     (Mature Protein)
3.7 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MAYEAKDYSKLIGMAGFSEALLKNHFTLYQGYVTNTNKVLDILAKMLADGATATPEYAEL
CCCCHHHHHHHHHHCCHHHHHHHHCHHHEECEECCHHHHHHHHHHHHHCCCCCCCHHHHH
KRRLGWEFNGMRLHEFYFENLGGNGAIDQAGKLAAKIVADFGSYEAWEKDFRATGAMRGI
HHHHCCCCCCCHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHCCHHHHHHHHHHHHHHCCC
GWAVLYQDSATGKLINFWVNEHDVAHPAGCTPILIMDVFEHAFMLDYGLKRPDYIEAFFK
EEEEEEECCCCCEEEEEEECCCCCCCCCCCCHHHHHHHHHHHHHHHHCCCCCHHHHHHHH
NIDWKAAEARLK
CCCCHHHHCCCC
>Mature Secondary Structure 
AYEAKDYSKLIGMAGFSEALLKNHFTLYQGYVTNTNKVLDILAKMLADGATATPEYAEL
CCCHHHHHHHHHHCCHHHHHHHHCHHHEECEECCHHHHHHHHHHHHHCCCCCCCHHHHH
KRRLGWEFNGMRLHEFYFENLGGNGAIDQAGKLAAKIVADFGSYEAWEKDFRATGAMRGI
HHHHCCCCCCCHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHCCHHHHHHHHHHHHHHCCC
GWAVLYQDSATGKLINFWVNEHDVAHPAGCTPILIMDVFEHAFMLDYGLKRPDYIEAFFK
EEEEEEECCCCCEEEEEEECCCCCCCCCCCCHHHHHHHHHHHHHHHHCCCCCHHHHHHHH
NIDWKAAEARLK
CCCCHHHHCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 12471500; 2180932 [H]