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The map label for this gene is hxuB [H]

Identifier: 39996255

GI number: 39996255

Start: 1245146

End: 1246822

Strand: Reverse

Name: hxuB [H]

Synonym: GSU1153

Alternate gene names: 39996255

Gene position: 1246822-1245146 (Counterclockwise)

Preceding gene: 39996256

Following gene: 39996231

Centisome position: 32.69

GC content: 61.12

Gene sequence:

>1677_bases
ATGAAAACGACCACGATCTTTACCGCAGCACTGCTCGCCTGCCTGTCTGCCCCGGCTCACGCCCAGGACCTGCGGGGAAG
CGAGGCCGGTGCCGTCATGAAACGCGAGTCCGACGTCCGGGACTACTACGAGCTGCAGCAGAGACTGAAGGAGTCGCGGG
AGTCACGCCCGGAGGAGGCGGTTACCGACCGGACCGAGCCGGCGCCACAGCCTCCGGCCGACGGCGGCCAGCGGGTGTTC
ATCAGCCATATCGTCACCGATCCCTCGGAAATTCTCACGGAAGATGATCTGCGGCAGGTCGTCGCCCCACTGGAGGGAAA
GGAGGTGAGTATCCGCGAGTTGCTGGCAATGGTGGACAGGATCAATGATCTCTATCGCCAGAAAGGATACCTGACCGCCC
GCGCCGTGCTTCCTCCGCAAAAGGTTGAGAGGGGAACGGTCAGGATCAGGCTGGTGGAGGGACGCGTCGGCAGGATCTCG
GTTGGGGGCAATCGCCATACCCGGGACTGGTTCGTTACGTCACGACTGCACCTTCGGGAGGGGGACCTGGTCCGGCTGGA
CACCCTCGAAAACGACCTCTTCCGTTTCAATGCCATCAACGACGTCAAGCTTCGGGCAGAGGTCAAGCCGGGCACAGCCA
CCGGCACCACCGACCTGATCCTCAGGACTCAGGAGCCCGACAACTACCGCGTGGTAGCTTTCGCCGACAATGGAGGAGGC
AGGTACATCGGCCAGGAGCGGCTGGGGCTCACTCTGCAGGACCTGAGCCTGCTGGGGATTCGTGATCCCCTCACCGTCGG
GGGGACCGTGGCGGACGGCACCCTCTCTGCTCATGCTTCATACAGCCTCCCCCTCACCCCGGTCGGTACCCGGCTCGGCG
TCACCTACGACTACACCAGTATCTGGATTACTTCGGGGCCCTTCGAGTCACTTGACGTGGATGGGACCTCTTCCGACCTG
GGACTCACTCTCAGTCAGCCCTTTGCACTCAGTCCAGCCCTGAGCGTCACCACTTTTGCCGGGTTCAACTGGAAAAAATC
GACCACAGACTTCGGCGGCGACACCATCTTCGAAAACAGAACCAGGACCCTTACCCTGGGTGGTGACCTGCTTGCCATCG
ACGGCTACGGCACCTGGTTCACCCGGCACGTCCTTACCCAGGGATTCCACGACTTCGGCGGCGACCGGAGCTTTTTCAAA
TACAATGGAGATCTGGTCAGGACTTTCATTCTGCCTGACGATTTTTCGGCCCTGGTGCGGGCAAGCGGCCAGGTATCTGG
CAATCACCTGCTCCCCTCTTCCGAACAATTTCAGCTCGGCGGCATAGCCACTGTCAGGGGGTTCTACGAGGGACTCCTCA
TCGGCGACGACGGCTACTTCGTCAGTGCGGAACTGACCCTTCCCCTCTTCCCGGCAGACGCATCCGTCTACGATGTCCGG
CTTAGCCCCCTGCTCAGGGGAGCGATCTTCTTCGATCACGGCGGCGCCTTTCCGTACAAGGGAAGCGGCGAATCCATCGA
TCACAATGATTTTCTCTCCAGCGCCGGCTTCGGCTTCATCCTGAATCTGGCCAAGTATCTCACGGGACGGATCGACTTCG
GCTTCCCCGTTGGTGAACGCGATCCCGATCCGGGGACTGTCAGGGTTCACTTCTCCCTCAGCTCCGAAATTCTCTGA

Upstream 100 bases:

>100_bases
AGCCCGGAGCGGTAGGCATCGACGCAAGCGATTCCCTGCTGGAAGCCGATACGGTGAAGGTACTCACCGGCAATACTGGT
GCAAACCGTTAGGGGATGAC

Downstream 100 bases:

>100_bases
GAAACGGAGACCGTCCTACAACGAAAAAGGGAGCCGCAGGGCTCCCTTTTTCGTTGCGTATGAAGCATTCTCTCCCATCA
GGGGGTTCCGCTTTTCGTGA

Product: OMP85 family outer membrane protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 558; Mature: 558

Protein sequence:

>558_residues
MKTTTIFTAALLACLSAPAHAQDLRGSEAGAVMKRESDVRDYYELQQRLKESRESRPEEAVTDRTEPAPQPPADGGQRVF
ISHIVTDPSEILTEDDLRQVVAPLEGKEVSIRELLAMVDRINDLYRQKGYLTARAVLPPQKVERGTVRIRLVEGRVGRIS
VGGNRHTRDWFVTSRLHLREGDLVRLDTLENDLFRFNAINDVKLRAEVKPGTATGTTDLILRTQEPDNYRVVAFADNGGG
RYIGQERLGLTLQDLSLLGIRDPLTVGGTVADGTLSAHASYSLPLTPVGTRLGVTYDYTSIWITSGPFESLDVDGTSSDL
GLTLSQPFALSPALSVTTFAGFNWKKSTTDFGGDTIFENRTRTLTLGGDLLAIDGYGTWFTRHVLTQGFHDFGGDRSFFK
YNGDLVRTFILPDDFSALVRASGQVSGNHLLPSSEQFQLGGIATVRGFYEGLLIGDDGYFVSAELTLPLFPADASVYDVR
LSPLLRGAIFFDHGGAFPYKGSGESIDHNDFLSSAGFGFILNLAKYLTGRIDFGFPVGERDPDPGTVRVHFSLSSEIL

Sequences:

>Translated_558_residues
MKTTTIFTAALLACLSAPAHAQDLRGSEAGAVMKRESDVRDYYELQQRLKESRESRPEEAVTDRTEPAPQPPADGGQRVF
ISHIVTDPSEILTEDDLRQVVAPLEGKEVSIRELLAMVDRINDLYRQKGYLTARAVLPPQKVERGTVRIRLVEGRVGRIS
VGGNRHTRDWFVTSRLHLREGDLVRLDTLENDLFRFNAINDVKLRAEVKPGTATGTTDLILRTQEPDNYRVVAFADNGGG
RYIGQERLGLTLQDLSLLGIRDPLTVGGTVADGTLSAHASYSLPLTPVGTRLGVTYDYTSIWITSGPFESLDVDGTSSDL
GLTLSQPFALSPALSVTTFAGFNWKKSTTDFGGDTIFENRTRTLTLGGDLLAIDGYGTWFTRHVLTQGFHDFGGDRSFFK
YNGDLVRTFILPDDFSALVRASGQVSGNHLLPSSEQFQLGGIATVRGFYEGLLIGDDGYFVSAELTLPLFPADASVYDVR
LSPLLRGAIFFDHGGAFPYKGSGESIDHNDFLSSAGFGFILNLAKYLTGRIDFGFPVGERDPDPGTVRVHFSLSSEIL
>Mature_558_residues
MKTTTIFTAALLACLSAPAHAQDLRGSEAGAVMKRESDVRDYYELQQRLKESRESRPEEAVTDRTEPAPQPPADGGQRVF
ISHIVTDPSEILTEDDLRQVVAPLEGKEVSIRELLAMVDRINDLYRQKGYLTARAVLPPQKVERGTVRIRLVEGRVGRIS
VGGNRHTRDWFVTSRLHLREGDLVRLDTLENDLFRFNAINDVKLRAEVKPGTATGTTDLILRTQEPDNYRVVAFADNGGG
RYIGQERLGLTLQDLSLLGIRDPLTVGGTVADGTLSAHASYSLPLTPVGTRLGVTYDYTSIWITSGPFESLDVDGTSSDL
GLTLSQPFALSPALSVTTFAGFNWKKSTTDFGGDTIFENRTRTLTLGGDLLAIDGYGTWFTRHVLTQGFHDFGGDRSFFK
YNGDLVRTFILPDDFSALVRASGQVSGNHLLPSSEQFQLGGIATVRGFYEGLLIGDDGYFVSAELTLPLFPADASVYDVR
LSPLLRGAIFFDHGGAFPYKGSGESIDHNDFLSSAGFGFILNLAKYLTGRIDFGFPVGERDPDPGTVRVHFSLSSEIL

Specific function: Probable member of a two partner secretion pathway (TPS) in which it mediates the secretion of huxA [H]

COG id: COG2831

COG function: function code U; Hemolysin activation/secretion protein

Gene ontology:

Cell location: Cell outer membrane [H]

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Belongs to the tpsB (TC 1.B.20) family [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR013686 [H]

Pfam domain/function: PF08479 POTRA_2 [H]

EC number: NA

Molecular weight: Translated: 61142; Mature: 61142

Theoretical pI: Translated: 5.08; Mature: 5.08

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.2 %Cys     (Translated Protein)
0.5 %Met     (Translated Protein)
0.7 %Cys+Met (Translated Protein)
0.2 %Cys     (Mature Protein)
0.5 %Met     (Mature Protein)
0.7 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MKTTTIFTAALLACLSAPAHAQDLRGSEAGAVMKRESDVRDYYELQQRLKESRESRPEEA
CCCHHHHHHHHHHHHCCCCCHHHCCCCCCCCEECCCCHHHHHHHHHHHHHHHHHCCCHHH
VTDRTEPAPQPPADGGQRVFISHIVTDPSEILTEDDLRQVVAPLEGKEVSIRELLAMVDR
HCCCCCCCCCCCCCCCCEEEEEEECCCHHHHHCHHHHHHHHCCCCCCCCCHHHHHHHHHH
INDLYRQKGYLTARAVLPPQKVERGTVRIRLVEGRVGRISVGGNRHTRDWFVTSRLHLRE
HHHHHHHCCCEEEEECCCHHHCCCCEEEEEEEECCCEEEEECCCCCCCEEEEEEEEEECC
GDLVRLDTLENDLFRFNAINDVKLRAEVKPGTATGTTDLILRTQEPDNYRVVAFADNGGG
CCEEEEECCCCCEEEECCCCCEEEEEEECCCCCCCCEEEEEEECCCCCEEEEEEEECCCC
RYIGQERLGLTLQDLSLLGIRDPLTVGGTVADGTLSAHASYSLPLTPVGTRLGVTYDYTS
CEECHHHHCEEEECCEEEECCCCCCCCCEEECCCEECCCEECCCCCCCCCEEEEEEEEEE
IWITSGPFESLDVDGTSSDLGLTLSQPFALSPALSVTTFAGFNWKKSTTDFGGDTIFENR
EEEECCCCCCCCCCCCCCCCCEEECCCCCCCCCCEEEEEECCCCCCCCCCCCCCCEECCC
TRTLTLGGDLLAIDGYGTWFTRHVLTQGFHDFGGDRSFFKYNGDLVRTFILPDDFSALVR
CEEEEECCCEEEECCCCHHHHHHHHHHCHHHCCCCCCEEEECCCEEEEEECCCCHHHHHH
ASGQVSGNHLLPSSEQFQLGGIATVRGFYEGLLIGDDGYFVSAELTLPLFPADASVYDVR
CCCCCCCCCCCCCCCCEEECCCCEEHHHHCEEEECCCCEEEEEEEEEEEECCCCCEEEEE
LSPLLRGAIFFDHGGAFPYKGSGESIDHNDFLSSAGFGFILNLAKYLTGRIDFGFPVGER
ECHHHEEEEEEECCCCCCCCCCCCCCCCHHHHHCCCHHHHHHHHHHHCCCEECCCCCCCC
DPDPGTVRVHFSLSSEIL
CCCCCEEEEEEECCCCCC
>Mature Secondary Structure
MKTTTIFTAALLACLSAPAHAQDLRGSEAGAVMKRESDVRDYYELQQRLKESRESRPEEA
CCCHHHHHHHHHHHHCCCCCHHHCCCCCCCCEECCCCHHHHHHHHHHHHHHHHHCCCHHH
VTDRTEPAPQPPADGGQRVFISHIVTDPSEILTEDDLRQVVAPLEGKEVSIRELLAMVDR
HCCCCCCCCCCCCCCCCEEEEEEECCCHHHHHCHHHHHHHHCCCCCCCCCHHHHHHHHHH
INDLYRQKGYLTARAVLPPQKVERGTVRIRLVEGRVGRISVGGNRHTRDWFVTSRLHLRE
HHHHHHHCCCEEEEECCCHHHCCCCEEEEEEEECCCEEEEECCCCCCCEEEEEEEEEECC
GDLVRLDTLENDLFRFNAINDVKLRAEVKPGTATGTTDLILRTQEPDNYRVVAFADNGGG
CCEEEEECCCCCEEEECCCCCEEEEEEECCCCCCCCEEEEEEECCCCCEEEEEEEECCCC
RYIGQERLGLTLQDLSLLGIRDPLTVGGTVADGTLSAHASYSLPLTPVGTRLGVTYDYTS
CEECHHHHCEEEECCEEEECCCCCCCCCEEECCCEECCCEECCCCCCCCCEEEEEEEEEE
IWITSGPFESLDVDGTSSDLGLTLSQPFALSPALSVTTFAGFNWKKSTTDFGGDTIFENR
EEEECCCCCCCCCCCCCCCCCEEECCCCCCCCCCEEEEEECCCCCCCCCCCCCCCEECCC
TRTLTLGGDLLAIDGYGTWFTRHVLTQGFHDFGGDRSFFKYNGDLVRTFILPDDFSALVR
CEEEEECCCEEEECCCCHHHHHHHHHHCHHHCCCCCCEEEECCCEEEEEECCCCHHHHHH
ASGQVSGNHLLPSSEQFQLGGIATVRGFYEGLLIGDDGYFVSAELTLPLFPADASVYDVR
CCCCCCCCCCCCCCCCEEECCCCEEHHHHCEEEECCCCEEEEEEEEEEEECCCCCEEEEE
LSPLLRGAIFFDHGGAFPYKGSGESIDHNDFLSSAGFGFILNLAKYLTGRIDFGFPVGER
ECHHHEEEEEEECCCCCCCCCCCCCCCCHHHHHCCCHHHHHHHHHHHCCCEECCCCCCCC
DPDPGTVRVHFSLSSEIL
CCCCCEEEEEEECCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 6.0

TargetDB status: NA

Availability: NA

References: 7542800 [H]