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The map label for this gene is 39996223

Identifier: 39996223

GI number: 39996223

Start: 1204912

End: 1206513

Strand: Direct

Name: 39996223

Synonym: GSU1121

Alternate gene names: NA

Gene position: 1204912-1206513 (Clockwise)

Preceding gene: 39996222

Following gene: 39996224

Centisome position: 31.59

GC content: 64.36

Gene sequence:

>1602_bases
ATGCCTCTTTTGGTACGCAACCTCATTCTCGCCCCGGACCAGGGGGATGAGCTGCTGCGCGGGATGTTCGCCCGGCGGTT
TTCTCTGGATGAACGGGAGATCGTCGATTTCCGGCTCGTCCGCAAGAGTATCGATGCCCGCCGCAAGTCACGGATCAAGT
TCGTCTGCACTGTTGAATGCTCGCTCCTCAATGAGGCCGCATTTCTGGCCCGCCACGGCCACGATCCCGATGTCGCCGCA
AGTGCTCCGCCGGAACCGCCGGCCTTTCCATCTCTTGAATCTTCCCAGCGCATCGTTATCGTCGGCATGGGGCCCGCCGG
GCTTTTTGCGGCACTGCGCCTGGCGGAATACGGCCTTGTCGCCACTATCCTCGAACGCGGCCGGCCCGTGGAGGAGCGGG
GCAGGGATGTTCAGGCCTTCTGGGATAGGGGCGTGCTCGATCCGGAGAGCAACGTCCAGTTCGGGGAAGGGGGCGCCGGA
ACCTTTTCCGACGGCAAGCTGACCACGAGGGTGAATGACCCGAACATCAGGTACGTACTCGACAAACTGATAGGTTTCGG
CGCTCCGCCAGAGATCGGCCATCTTGCCAAGCCCCATATCGGCACCGACCGTCTACGCTTGGTGGTTGCCTCCATTCGCC
GGTGGCTGTTGTCAGCGGGGTTCGACATCCGGTTCGGCAGCCGTCTGACTGACTTGACACTTTCCGGCGGAGCGGTGGAG
GCCGCGGTGGTTAACGGGGCTGACGAACTCCCCTGCGATGCGCTTGTTCTCGCTCCGGGCAACAGCGCCCGCGATACCTA
CGAGATGCTGCTGCGCCGGGGGGCGCTTCTCCAACCCAAGCCCTTCGCCGTGGGAGTGCGGGTGGAGCATCCCCAGGAAC
TCATCAACCGGATCCAATACGGCGCGGGCCACCATCCAACCCTGCCGCCGGCTGACTACGCCCTGGCCTGGAACAATTCC
CGTACCGGACGCTCCGCCTATTCCTTCTGCATGTGCCCCGGCGGGGTGGTGGTGGCGGGAACCTCCGAGGCGGAAGGGGT
GGTGACCAACGGCATGAGCGCCTATCTGCGTAATTCTCCGTATTCGAACAGCGCCCTGGTGGTTACTGTCGGACCTGATG
ATTTCGGAGACCAGTCCCCCCTGGCCGGGATCGGGTTCCAGCGCCGTTTGGAGCGACGCGCCTTTGAGGCGGGCGGTGGG
GATTACCGGGCGCCGGCTCAGAACCTGCTTGCGTTTCTCGGCATGAAAGGGGGGGGGCGGGGGTTGTCGAGCTATCGCCC
CGGCGTTCGCGAGGCGGAGCTGGATCGGGTGCTCCCCACCGCCGTGACAGAAGCGTTGCGGGAGGGAGTTCGCCATTTCG
ACCGGAAGATGCGGGGCTTCCTGACCGCCGAAGCAACCCTCACCGCACCGGAGACCCGTACGTCGGCACCCGTTCGCATT
GTGCGGGGAGAGAACCTGCAATCAGTGGGGCTCCCCGGTCTTTATCCGGCAGGGGAAGGTGCCGGCTACGCCGGGGGAAT
CATGAGCGCCGCACTGGACGGTATTCGCGTGGCCGACGCCATCGCGCGGAGCATATCCGCAGACACAAGGAGAACACTTT
GA

Upstream 100 bases:

>100_bases
TCACGTGTCCAAATCGACCAGTCCGGTCGACATCGTGATTATCGTGGAACAGCTACTGGACCGGAAAAAACACGGCCGGA
GCGGGAACTGAAAGAAATCG

Downstream 100 bases:

>100_bases
GCAAGATTTTCATAGCGAGCATCCATGACCGCGATCTGGTCGATTCCGTGTTTCTCGTGAAGGAAAAGATCATGGCCATG
GCCAAGAACGGCAAGCCCTA

Product: hypothetical protein

Products: NA

Alternate protein names: ORF1 [H]

Number of amino acids: Translated: 533; Mature: 532

Protein sequence:

>533_residues
MPLLVRNLILAPDQGDELLRGMFARRFSLDEREIVDFRLVRKSIDARRKSRIKFVCTVECSLLNEAAFLARHGHDPDVAA
SAPPEPPAFPSLESSQRIVIVGMGPAGLFAALRLAEYGLVATILERGRPVEERGRDVQAFWDRGVLDPESNVQFGEGGAG
TFSDGKLTTRVNDPNIRYVLDKLIGFGAPPEIGHLAKPHIGTDRLRLVVASIRRWLLSAGFDIRFGSRLTDLTLSGGAVE
AAVVNGADELPCDALVLAPGNSARDTYEMLLRRGALLQPKPFAVGVRVEHPQELINRIQYGAGHHPTLPPADYALAWNNS
RTGRSAYSFCMCPGGVVVAGTSEAEGVVTNGMSAYLRNSPYSNSALVVTVGPDDFGDQSPLAGIGFQRRLERRAFEAGGG
DYRAPAQNLLAFLGMKGGGRGLSSYRPGVREAELDRVLPTAVTEALREGVRHFDRKMRGFLTAEATLTAPETRTSAPVRI
VRGENLQSVGLPGLYPAGEGAGYAGGIMSAALDGIRVADAIARSISADTRRTL

Sequences:

>Translated_533_residues
MPLLVRNLILAPDQGDELLRGMFARRFSLDEREIVDFRLVRKSIDARRKSRIKFVCTVECSLLNEAAFLARHGHDPDVAA
SAPPEPPAFPSLESSQRIVIVGMGPAGLFAALRLAEYGLVATILERGRPVEERGRDVQAFWDRGVLDPESNVQFGEGGAG
TFSDGKLTTRVNDPNIRYVLDKLIGFGAPPEIGHLAKPHIGTDRLRLVVASIRRWLLSAGFDIRFGSRLTDLTLSGGAVE
AAVVNGADELPCDALVLAPGNSARDTYEMLLRRGALLQPKPFAVGVRVEHPQELINRIQYGAGHHPTLPPADYALAWNNS
RTGRSAYSFCMCPGGVVVAGTSEAEGVVTNGMSAYLRNSPYSNSALVVTVGPDDFGDQSPLAGIGFQRRLERRAFEAGGG
DYRAPAQNLLAFLGMKGGGRGLSSYRPGVREAELDRVLPTAVTEALREGVRHFDRKMRGFLTAEATLTAPETRTSAPVRI
VRGENLQSVGLPGLYPAGEGAGYAGGIMSAALDGIRVADAIARSISADTRRTL
>Mature_532_residues
PLLVRNLILAPDQGDELLRGMFARRFSLDEREIVDFRLVRKSIDARRKSRIKFVCTVECSLLNEAAFLARHGHDPDVAAS
APPEPPAFPSLESSQRIVIVGMGPAGLFAALRLAEYGLVATILERGRPVEERGRDVQAFWDRGVLDPESNVQFGEGGAGT
FSDGKLTTRVNDPNIRYVLDKLIGFGAPPEIGHLAKPHIGTDRLRLVVASIRRWLLSAGFDIRFGSRLTDLTLSGGAVEA
AVVNGADELPCDALVLAPGNSARDTYEMLLRRGALLQPKPFAVGVRVEHPQELINRIQYGAGHHPTLPPADYALAWNNSR
TGRSAYSFCMCPGGVVVAGTSEAEGVVTNGMSAYLRNSPYSNSALVVTVGPDDFGDQSPLAGIGFQRRLERRAFEAGGGD
YRAPAQNLLAFLGMKGGGRGLSSYRPGVREAELDRVLPTAVTEALREGVRHFDRKMRGFLTAEATLTAPETRTSAPVRIV
RGENLQSVGLPGLYPAGEGAGYAGGIMSAALDGIRVADAIARSISADTRRTL

Specific function: Unknown

COG id: COG2509

COG function: function code R; Uncharacterized FAD-dependent dehydrogenases

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR004792 [H]

Pfam domain/function: PF03486 HI0933_like [H]

EC number: NA

Molecular weight: Translated: 57289; Mature: 57158

Theoretical pI: Translated: 8.45; Mature: 8.45

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.9 %Cys     (Translated Protein)
1.7 %Met     (Translated Protein)
2.6 %Cys+Met (Translated Protein)
0.9 %Cys     (Mature Protein)
1.5 %Met     (Mature Protein)
2.4 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MPLLVRNLILAPDQGDELLRGMFARRFSLDEREIVDFRLVRKSIDARRKSRIKFVCTVEC
CCEEECCEEECCCCHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHCCEEEEEEEEH
SLLNEAAFLARHGHDPDVAASAPPEPPAFPSLESSQRIVIVGMGPAGLFAALRLAEYGLV
HHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCEEEEEECCHHHHHHHHHHHHHHHH
ATILERGRPVEERGRDVQAFWDRGVLDPESNVQFGEGGAGTFSDGKLTTRVNDPNIRYVL
HHHHHCCCCHHHHCCCHHHHHCCCCCCCCCCCEECCCCCCCCCCCEEEEEECCCHHHHHH
DKLIGFGAPPEIGHLAKPHIGTDRLRLVVASIRRWLLSAGFDIRFGSRLTDLTLSGGAVE
HHHHCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHCCCCEEECCCEEEEEECCCCEE
AAVVNGADELPCDALVLAPGNSARDTYEMLLRRGALLQPKPFAVGVRVEHPQELINRIQY
EEEECCCCCCCCCEEEECCCCCCHHHHHHHHHCCCCCCCCCCEEEEEECCHHHHHHHHHC
GAGHHPTLPPADYALAWNNSRTGRSAYSFCMCPGGVVVAGTSEAEGVVTNGMSAYLRNSP
CCCCCCCCCCCCEEEEECCCCCCCHHHEEEECCCCEEEECCCCCCCCHHCCHHHHHCCCC
YSNSALVVTVGPDDFGDQSPLAGIGFQRRLERRAFEAGGGDYRAPAQNLLAFLGMKGGGR
CCCCEEEEEECCCCCCCCCCCCCCCHHHHHHHHHHHCCCCCCCCCHHHHHHHHCCCCCCC
GLSSYRPGVREAELDRVLPTAVTEALREGVRHFDRKMRGFLTAEATLTAPETRTSAPVRI
CCHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHEEEECEEEECCCCCCCCCEEE
VRGENLQSVGLPGLYPAGEGAGYAGGIMSAALDGIRVADAIARSISADTRRTL
EECCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHCCHHHCCC
>Mature Secondary Structure 
PLLVRNLILAPDQGDELLRGMFARRFSLDEREIVDFRLVRKSIDARRKSRIKFVCTVEC
CEEECCEEECCCCHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHCCEEEEEEEEH
SLLNEAAFLARHGHDPDVAASAPPEPPAFPSLESSQRIVIVGMGPAGLFAALRLAEYGLV
HHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCEEEEEECCHHHHHHHHHHHHHHHH
ATILERGRPVEERGRDVQAFWDRGVLDPESNVQFGEGGAGTFSDGKLTTRVNDPNIRYVL
HHHHHCCCCHHHHCCCHHHHHCCCCCCCCCCCEECCCCCCCCCCCEEEEEECCCHHHHHH
DKLIGFGAPPEIGHLAKPHIGTDRLRLVVASIRRWLLSAGFDIRFGSRLTDLTLSGGAVE
HHHHCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHCCCCEEECCCEEEEEECCCCEE
AAVVNGADELPCDALVLAPGNSARDTYEMLLRRGALLQPKPFAVGVRVEHPQELINRIQY
EEEECCCCCCCCCEEEECCCCCCHHHHHHHHHCCCCCCCCCCEEEEEECCHHHHHHHHHC
GAGHHPTLPPADYALAWNNSRTGRSAYSFCMCPGGVVVAGTSEAEGVVTNGMSAYLRNSP
CCCCCCCCCCCCEEEEECCCCCCCHHHEEEECCCCEEEECCCCCCCCHHCCHHHHHCCCC
YSNSALVVTVGPDDFGDQSPLAGIGFQRRLERRAFEAGGGDYRAPAQNLLAFLGMKGGGR
CCCCEEEEEECCCCCCCCCCCCCCCHHHHHHHHHHHCCCCCCCCCHHHHHHHHCCCCCCC
GLSSYRPGVREAELDRVLPTAVTEALREGVRHFDRKMRGFLTAEATLTAPETRTSAPVRI
CCHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHEEEECEEEECCCCCCCCCEEE
VRGENLQSVGLPGLYPAGEGAGYAGGIMSAALDGIRVADAIARSISADTRRTL
EECCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHCCHHHCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: 8396545 [H]