| Definition | Geobacter sulfurreducens PCA chromosome, complete genome. |
|---|---|
| Accession | NC_002939 |
| Length | 3,814,139 |
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The map label for this gene is 39996147
Identifier: 39996147
GI number: 39996147
Start: 1133170
End: 1133610
Strand: Direct
Name: 39996147
Synonym: GSU1045
Alternate gene names: NA
Gene position: 1133170-1133610 (Clockwise)
Preceding gene: 39996146
Following gene: 39996148
Centisome position: 29.71
GC content: 64.4
Gene sequence:
>441_bases GTGTCATTTGTTTCCGCTCTCTGCCGCCTGGCCGTCGCCCTGTGGGTCGGCGGCGCAACCCTGTTCACCTTTGTCCTGAC CCCGACCATCTTCCGTTCCGAGAGTCGTGACGCAGCAGGGCGTATCGTCGGCTACCTCTTCCCGGGCTACTTCCGCTGGG GGCTCGCCTGCGGTGCCGTGGCCCTGGTGGCGCTCCTGGTCGTCAGGGGAAAGAACTGGATTCCGGCCGCGGCCCTGATG GTGGTGATGCTTGCCGTCACGGCGTTCCAGGCCCTCCACATCGAGCCGAAGGCCGCGGAGCTCAAGCGCCAGATCCCCTC TTTCGAAACCACCACCAAGGATCATCCTCTCAGGCGCGAGTTTTCGAAGCTCCACGGGATTTCTGCGGCGTGCAACCTGT CGGTGATTGCCGGCGGGGTGGTGCTGGTTATCCTGCTCTAG
Upstream 100 bases:
>100_bases TCGAGCGCTTTGCACTCGGGGACCGGGAAAAGTCATGAAAGGCCGGAACCCGGGAATCGGGATTCGGAAAAGCGTACCAG CACCGTAAGGGAGGTTCACC
Downstream 100 bases:
>100_bases GGTGAAGAACACCATGGAGATTCCCTGCCACCCCGACTCCCGCCCCCTTGCCCTGGCGGACAAGCCGCTGCTGGACGCCC TGTTCACAGAGCTTCAGCCC
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 146; Mature: 145
Protein sequence:
>146_residues MSFVSALCRLAVALWVGGATLFTFVLTPTIFRSESRDAAGRIVGYLFPGYFRWGLACGAVALVALLVVRGKNWIPAAALM VVMLAVTAFQALHIEPKAAELKRQIPSFETTTKDHPLRREFSKLHGISAACNLSVIAGGVVLVILL
Sequences:
>Translated_146_residues MSFVSALCRLAVALWVGGATLFTFVLTPTIFRSESRDAAGRIVGYLFPGYFRWGLACGAVALVALLVVRGKNWIPAAALM VVMLAVTAFQALHIEPKAAELKRQIPSFETTTKDHPLRREFSKLHGISAACNLSVIAGGVVLVILL >Mature_145_residues SFVSALCRLAVALWVGGATLFTFVLTPTIFRSESRDAAGRIVGYLFPGYFRWGLACGAVALVALLVVRGKNWIPAAALMV VMLAVTAFQALHIEPKAAELKRQIPSFETTTKDHPLRREFSKLHGISAACNLSVIAGGVVLVILL
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 15712; Mature: 15581
Theoretical pI: Translated: 10.46; Mature: 10.46
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
2.1 %Cys (Translated Protein) 2.1 %Met (Translated Protein) 4.1 %Cys+Met (Translated Protein) 2.1 %Cys (Mature Protein) 1.4 %Met (Mature Protein) 3.4 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MSFVSALCRLAVALWVGGATLFTFVLTPTIFRSESRDAAGRIVGYLFPGYFRWGLACGAV CHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHH ALVALLVVRGKNWIPAAALMVVMLAVTAFQALHIEPKAAELKRQIPSFETTTKDHPLRRE HHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHCCCCHHHHHHHHCCCCCCCCCCCHHHHH FSKLHGISAACNLSVIAGGVVLVILL HHHHHCCHHHHHHHHHHHHHHHEEEC >Mature Secondary Structure SFVSALCRLAVALWVGGATLFTFVLTPTIFRSESRDAAGRIVGYLFPGYFRWGLACGAV HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHH ALVALLVVRGKNWIPAAALMVVMLAVTAFQALHIEPKAAELKRQIPSFETTTKDHPLRRE HHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHCCCCHHHHHHHHCCCCCCCCCCCHHHHH FSKLHGISAACNLSVIAGGVVLVILL HHHHHCCHHHHHHHHHHHHHHHEEEC
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA