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The map label for this gene is nudC [H]

Identifier: 39996146

GI number: 39996146

Start: 1132163

End: 1133107

Strand: Direct

Name: nudC [H]

Synonym: GSU1044

Alternate gene names: 39996146

Gene position: 1132163-1133107 (Clockwise)

Preceding gene: 39996144

Following gene: 39996147

Centisome position: 29.68

GC content: 65.82

Gene sequence:

>945_bases
GTGTCGCCAGCCCCCGCACGCCGGCACCGGTTGCGGACAACACCCGCTTCGACAATCTCCGGAGGCCCCATGCGGTATCC
CGATACGGTCAATCTTCCCTTTAACGCAGCGGTACTCGGCGACTGCTTCGAAATGCTCCATCCCGGCATCCCCGATGATG
GCGCGCCGGGCATCTGGACCATTCTGCGCGGCGGTTCGCTGGTTGTGGCCGCCCAGGCCGACCGATTGGTTCTCCCCCGT
GGGACGTTGCCGGATGGGCTTGTTGCCGAGTCCGAGCCTGTCCTTATTGCCCGCTGGCAGGGGCTGCCGGTCAGGGCCGT
CCGCATCGGCTCCCGGGCCGAGCTGCCGTCGCATCTGGCTGCTGAGCCGTTCAACGCAGGCGACGAACGTCTGGATGACG
CAACCCTCACTCTGGGCGGCATTGCCCAGCAGGTCCTGCACTGGGATCTCTCCAGCGTCCGCTGCCCGCGTTGCGGTGGT
GCCACGGAGCGTCTTGCCGGCGGATGGGGCAAGCACTGCCCCTCGTGCCGGACCGAGCATTTTCCCCACATCCATCCCTG
CGCCATCATCCTCGTCAGGAGGGGAGACGAGTTTCTCCTGGTTCGCAAGCCCGAGTGGGCGCCCGGGCGTTATAGCCTCG
TGGCCGGTTTTCTCGATTTCGGTGAGTCGCTGGAGGAGTGCGCCCGCCGTGAGGTGCGGGAAGAGGCAGGGGTTGAGATT
ACCGACATCCGCTATGTGGGGAGCCAGTGCTGGCCGTTTCCGAGCCAGCTCATGGCGGGGTTCGTGGCTGAATACACCGG
CGGCGAGATCCGGGTCGATCCCGATGAAATCGAGGACGGCCGCTGGTTCAGCGTGGACCGGATGCCCGGTTCGCTCCCCC
ATCACCGCAGCATTGCCCGGTGGATCATCGAGCGCTTTGCACTCGGGGACCGGGAAAAGTCATGA

Upstream 100 bases:

>100_bases
CTCAGTCGCTCTCTTCCGCAGTTCGCGGTTGCGCAGGCGCGGCGCGGGGGGTATTCTTAGAGCTTGTTTGCAGGCAACGG
GCCGCCAAGGCGCTGACGGC

Downstream 100 bases:

>100_bases
AAGGCCGGAACCCGGGAATCGGGATTCGGAAAAGCGTACCAGCACCGTAAGGGAGGTTCACCGTGTCATTTGTTTCCGCT
CTCTGCCGCCTGGCCGTCGC

Product: mutT/nudix family protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 314; Mature: 313

Protein sequence:

>314_residues
MSPAPARRHRLRTTPASTISGGPMRYPDTVNLPFNAAVLGDCFEMLHPGIPDDGAPGIWTILRGGSLVVAAQADRLVLPR
GTLPDGLVAESEPVLIARWQGLPVRAVRIGSRAELPSHLAAEPFNAGDERLDDATLTLGGIAQQVLHWDLSSVRCPRCGG
ATERLAGGWGKHCPSCRTEHFPHIHPCAIILVRRGDEFLLVRKPEWAPGRYSLVAGFLDFGESLEECARREVREEAGVEI
TDIRYVGSQCWPFPSQLMAGFVAEYTGGEIRVDPDEIEDGRWFSVDRMPGSLPHHRSIARWIIERFALGDREKS

Sequences:

>Translated_314_residues
MSPAPARRHRLRTTPASTISGGPMRYPDTVNLPFNAAVLGDCFEMLHPGIPDDGAPGIWTILRGGSLVVAAQADRLVLPR
GTLPDGLVAESEPVLIARWQGLPVRAVRIGSRAELPSHLAAEPFNAGDERLDDATLTLGGIAQQVLHWDLSSVRCPRCGG
ATERLAGGWGKHCPSCRTEHFPHIHPCAIILVRRGDEFLLVRKPEWAPGRYSLVAGFLDFGESLEECARREVREEAGVEI
TDIRYVGSQCWPFPSQLMAGFVAEYTGGEIRVDPDEIEDGRWFSVDRMPGSLPHHRSIARWIIERFALGDREKS
>Mature_313_residues
SPAPARRHRLRTTPASTISGGPMRYPDTVNLPFNAAVLGDCFEMLHPGIPDDGAPGIWTILRGGSLVVAAQADRLVLPRG
TLPDGLVAESEPVLIARWQGLPVRAVRIGSRAELPSHLAAEPFNAGDERLDDATLTLGGIAQQVLHWDLSSVRCPRCGGA
TERLAGGWGKHCPSCRTEHFPHIHPCAIILVRRGDEFLLVRKPEWAPGRYSLVAGFLDFGESLEECARREVREEAGVEIT
DIRYVGSQCWPFPSQLMAGFVAEYTGGEIRVDPDEIEDGRWFSVDRMPGSLPHHRSIARWIIERFALGDREKS

Specific function: Unknown

COG id: COG2816

COG function: function code L; NTP pyrophosphohydrolases containing a Zn-finger, probably nucleic-acid-binding

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Contains 1 nudix hydrolase domain [H]

Homologues:

Organism=Homo sapiens, GI13899267, Length=171, Percent_Identity=37.4269005847953, Blast_Score=115, Evalue=4e-26,
Organism=Homo sapiens, GI50593112, Length=166, Percent_Identity=39.7590361445783, Blast_Score=114, Evalue=1e-25,
Organism=Escherichia coli, GI48994995, Length=241, Percent_Identity=34.8547717842324, Blast_Score=146, Evalue=2e-36,
Organism=Caenorhabditis elegans, GI71986510, Length=155, Percent_Identity=37.4193548387097, Blast_Score=100, Evalue=2e-21,
Organism=Caenorhabditis elegans, GI212645999, Length=155, Percent_Identity=37.4193548387097, Blast_Score=99, Evalue=2e-21,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR015375
- InterPro:   IPR022925
- InterPro:   IPR020084
- InterPro:   IPR000086
- InterPro:   IPR015797
- InterPro:   IPR015376 [H]

Pfam domain/function: PF00293 NUDIX; PF09296 NUDIX-like; PF09297 zf-NADH-PPase [H]

EC number: =3.6.1.22 [H]

Molecular weight: Translated: 34548; Mature: 34417

Theoretical pI: Translated: 6.35; Mature: 6.35

Prosite motif: PS00893 NUDIX

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

2.5 %Cys     (Translated Protein)
1.6 %Met     (Translated Protein)
4.1 %Cys+Met (Translated Protein)
2.6 %Cys     (Mature Protein)
1.3 %Met     (Mature Protein)
3.8 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MSPAPARRHRLRTTPASTISGGPMRYPDTVNLPFNAAVLGDCFEMLHPGIPDDGAPGIWT
CCCCCCHHHHCCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHCCCCCCCCCCCEEE
ILRGGSLVVAAQADRLVLPRGTLPDGLVAESEPVLIARWQGLPVRAVRIGSRAELPSHLA
EECCCCEEEEECCCEEEECCCCCCCCCCCCCCCEEEEECCCCCEEEEEECCCCCCCHHHH
AEPFNAGDERLDDATLTLGGIAQQVLHWDLSSVRCPRCGGATERLAGGWGKHCPSCRTEH
CCCCCCCHHHHCCHHEEHHHHHHHHHHHHHHHCCCCCCCCCHHHHHCCCCCCCCCCCCCC
FPHIHPCAIILVRRGDEFLLVRKPEWAPGRYSLVAGFLDFGESLEECARREVREEAGVEI
CCCCCCEEEEEEECCCEEEEEECCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCEE
TDIRYVGSQCWPFPSQLMAGFVAEYTGGEIRVDPDEIEDGRWFSVDRMPGSLPHHRSIAR
EEEEEECCCCCCCHHHHHHHHHHHCCCCEEEECHHHCCCCCEEEECCCCCCCCCHHHHHH
WIIERFALGDREKS
HHHHHHHCCCCCCC
>Mature Secondary Structure 
SPAPARRHRLRTTPASTISGGPMRYPDTVNLPFNAAVLGDCFEMLHPGIPDDGAPGIWT
CCCCCHHHHCCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHCCCCCCCCCCCEEE
ILRGGSLVVAAQADRLVLPRGTLPDGLVAESEPVLIARWQGLPVRAVRIGSRAELPSHLA
EECCCCEEEEECCCEEEECCCCCCCCCCCCCCCEEEEECCCCCEEEEEECCCCCCCHHHH
AEPFNAGDERLDDATLTLGGIAQQVLHWDLSSVRCPRCGGATERLAGGWGKHCPSCRTEH
CCCCCCCHHHHCCHHEEHHHHHHHHHHHHHHHCCCCCCCCCHHHHHCCCCCCCCCCCCCC
FPHIHPCAIILVRRGDEFLLVRKPEWAPGRYSLVAGFLDFGESLEECARREVREEAGVEI
CCCCCCEEEEEEECCCEEEEEECCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCEE
TDIRYVGSQCWPFPSQLMAGFVAEYTGGEIRVDPDEIEDGRWFSVDRMPGSLPHHRSIAR
EEEEEECCCCCCCHHHHHHHHHHHCCCCEEEECHHHCCCCCEEEECCCCCCCCCHHHHHH
WIIERFALGDREKS
HHHHHHHCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA