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The map label for this gene is atoS [H]

Identifier: 39996107

GI number: 39996107

Start: 1084304

End: 1085395

Strand: Reverse

Name: atoS [H]

Synonym: GSU1004

Alternate gene names: 39996107

Gene position: 1085395-1084304 (Counterclockwise)

Preceding gene: 39996108

Following gene: 39996106

Centisome position: 28.46

GC content: 62.73

Gene sequence:

>1092_bases
ATGACCACCGAAGAAAAGAAAGAGGAATTCCTTGCCACCGTGATCGACAGCGTCGGAGACGGCGTCATCGTCATCGACCT
GGACGGACGGATCGCCCTGATGAACCCCGCTGCGGAGGAGATCTCCGGCATTTCGCGGCGGCAGGCCGTGGGACATCGCT
TCGCCCTCGTCTTCCACCGGGAGGCGGTGCTGCGGGAGATGGTCGGCAAGACCGCCACCAGCGGCATGACCATCTCCGAC
CACGAGAACATCGTCATCCGGAAGCTGAAGCAGCTGACGCCGGTTTCGGCGACCACCTTCCCACTTATGCTTCCTCACGG
CGAAACCACCGGGACGATCCTGGTGCTGCGCGACATCACCAGCATCCGGGAGCTGGAAGATGCCGTCCGCAATGCCGACC
GGCTTTCCACCCTGGGAACCCTGGCCGCGGGATTGGCCCACGAGATCAAGAACCCCCTGGGGGGCATCAAGGGAGCGGCC
CAGCTCCTGGAGCTGGAACTGCCCACCGAAAGCGAGTTGCGCGACAACGTCCGGATCATGCTCAAGGAGGTGGAGCGGGT
CAACCGGATTGTTGAGGAGCTTCTGGCCTTGGCCTCGCCCCGGGGACTGCAACTGAGCAAGGTGAACCTCCATAAGGTCA
TCGGCGACATCCTCACGCTCCAGAAGCGCTCGACCGAAGGGAAGAACGTCGCCTTCCAGCAGCAGTTCGATCCCAGCATC
CCGCCCATCCTTGCCGACGAGGGGCTGTTGACCCAGCTTTTTCTGAACCTCGTGAAAAACGCGATGGAGGCGGTGGATGA
CGGCGGCTGCATCCGGGTCGCCAGCCGGGTGATATCCGACTACTCAATGACCCAGAAGGGCGAGCGACGCTCGCGGATGG
TGGCCATCGACGTGGCCGACGATGGACCTGGCATCCCGCCGGAGCGGCTCGAGCAGCTCTTCACGCCCTTTTTCACCACC
AAGACCAAGGGGACGGGCCTGGGGCTGGCCATCTGCCAGAAAATCGTGACGGAGCATCGGGGAATGATCAAGGTGGAATC
GTACCCCGGCAAAGGGACCACCTTCACGGTGATGCTCCCCCTGATTCAGTAG

Upstream 100 bases:

>100_bases
TCCCCGGTGCGGCACAGTTCCGGAAGGAAATCAACGAGATTGAGGGCAATGGCGCCCTGATGGAAGCAGTGAGCCGCTTT
TTCACGGCTGTGGGGGCGCC

Downstream 100 bases:

>100_bases
CCGGGATCTTTCCCTTAACCATGTTCACTTCCATATCCACAGTTCGAGGTCTGCAATGTTACTGAACCGCATATTGGTTG
CCGATGACGAAGAAAGCATG

Product: sensory box histidine kinase

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 363; Mature: 362

Protein sequence:

>363_residues
MTTEEKKEEFLATVIDSVGDGVIVIDLDGRIALMNPAAEEISGISRRQAVGHRFALVFHREAVLREMVGKTATSGMTISD
HENIVIRKLKQLTPVSATTFPLMLPHGETTGTILVLRDITSIRELEDAVRNADRLSTLGTLAAGLAHEIKNPLGGIKGAA
QLLELELPTESELRDNVRIMLKEVERVNRIVEELLALASPRGLQLSKVNLHKVIGDILTLQKRSTEGKNVAFQQQFDPSI
PPILADEGLLTQLFLNLVKNAMEAVDDGGCIRVASRVISDYSMTQKGERRSRMVAIDVADDGPGIPPERLEQLFTPFFTT
KTKGTGLGLAICQKIVTEHRGMIKVESYPGKGTTFTVMLPLIQ

Sequences:

>Translated_363_residues
MTTEEKKEEFLATVIDSVGDGVIVIDLDGRIALMNPAAEEISGISRRQAVGHRFALVFHREAVLREMVGKTATSGMTISD
HENIVIRKLKQLTPVSATTFPLMLPHGETTGTILVLRDITSIRELEDAVRNADRLSTLGTLAAGLAHEIKNPLGGIKGAA
QLLELELPTESELRDNVRIMLKEVERVNRIVEELLALASPRGLQLSKVNLHKVIGDILTLQKRSTEGKNVAFQQQFDPSI
PPILADEGLLTQLFLNLVKNAMEAVDDGGCIRVASRVISDYSMTQKGERRSRMVAIDVADDGPGIPPERLEQLFTPFFTT
KTKGTGLGLAICQKIVTEHRGMIKVESYPGKGTTFTVMLPLIQ
>Mature_362_residues
TTEEKKEEFLATVIDSVGDGVIVIDLDGRIALMNPAAEEISGISRRQAVGHRFALVFHREAVLREMVGKTATSGMTISDH
ENIVIRKLKQLTPVSATTFPLMLPHGETTGTILVLRDITSIRELEDAVRNADRLSTLGTLAAGLAHEIKNPLGGIKGAAQ
LLELELPTESELRDNVRIMLKEVERVNRIVEELLALASPRGLQLSKVNLHKVIGDILTLQKRSTEGKNVAFQQQFDPSIP
PILADEGLLTQLFLNLVKNAMEAVDDGGCIRVASRVISDYSMTQKGERRSRMVAIDVADDGPGIPPERLEQLFTPFFTTK
TKGTGLGLAICQKIVTEHRGMIKVESYPGKGTTFTVMLPLIQ

Specific function: Member of the two-component regulatory system AtoS/AtoC; may activate AtoC by phosphorylation [H]

COG id: COG0642

COG function: function code T; Signal transduction histidine kinase

Gene ontology:

Cell location: Cell inner membrane; Multi-pass membrane protein [H]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Contains 1 PAS (PER-ARNT-SIM) domain [H]

Homologues:

Organism=Escherichia coli, GI1788549, Length=354, Percent_Identity=35.3107344632768, Blast_Score=213, Evalue=1e-56,
Organism=Escherichia coli, GI1790436, Length=245, Percent_Identity=40, Blast_Score=173, Evalue=2e-44,
Organism=Escherichia coli, GI1790300, Length=352, Percent_Identity=32.1022727272727, Blast_Score=163, Evalue=2e-41,
Organism=Escherichia coli, GI48994928, Length=382, Percent_Identity=26.4397905759162, Blast_Score=97, Evalue=1e-21,
Organism=Escherichia coli, GI145693157, Length=272, Percent_Identity=31.25, Blast_Score=96, Evalue=3e-21,
Organism=Escherichia coli, GI1786600, Length=259, Percent_Identity=27.7992277992278, Blast_Score=92, Evalue=8e-20,
Organism=Escherichia coli, GI1790567, Length=369, Percent_Identity=27.6422764227642, Blast_Score=83, Evalue=2e-17,
Organism=Escherichia coli, GI1790346, Length=232, Percent_Identity=25.8620689655172, Blast_Score=82, Evalue=4e-17,
Organism=Escherichia coli, GI1788393, Length=232, Percent_Identity=27.1551724137931, Blast_Score=79, Evalue=4e-16,
Organism=Escherichia coli, GI1786912, Length=281, Percent_Identity=28.8256227758007, Blast_Score=78, Evalue=7e-16,
Organism=Escherichia coli, GI1789149, Length=233, Percent_Identity=27.4678111587983, Blast_Score=76, Evalue=4e-15,
Organism=Escherichia coli, GI1786783, Length=241, Percent_Identity=26.1410788381743, Blast_Score=75, Evalue=6e-15,
Organism=Escherichia coli, GI1789808, Length=230, Percent_Identity=25.6521739130435, Blast_Score=74, Evalue=1e-14,
Organism=Escherichia coli, GI87081816, Length=228, Percent_Identity=28.5087719298246, Blast_Score=74, Evalue=2e-14,
Organism=Escherichia coli, GI1790861, Length=215, Percent_Identity=28.3720930232558, Blast_Score=71, Evalue=1e-13,
Organism=Escherichia coli, GI1788713, Length=404, Percent_Identity=22.5247524752475, Blast_Score=71, Evalue=1e-13,
Organism=Escherichia coli, GI1788279, Length=240, Percent_Identity=24.5833333333333, Blast_Score=66, Evalue=3e-12,
Organism=Escherichia coli, GI87082128, Length=244, Percent_Identity=25, Blast_Score=62, Evalue=6e-11,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR003594
- InterPro:   IPR003660
- InterPro:   IPR000014
- InterPro:   IPR000700
- InterPro:   IPR013767
- InterPro:   IPR004358
- InterPro:   IPR003661
- InterPro:   IPR005467
- InterPro:   IPR009082 [H]

Pfam domain/function: PF00672 HAMP; PF02518 HATPase_c; PF00512 HisKA; PF00989 PAS [H]

EC number: =2.7.13.3 [H]

Molecular weight: Translated: 39746; Mature: 39615

Theoretical pI: Translated: 6.42; Mature: 6.42

Prosite motif: PS50112 PAS ; PS50113 PAC ; PS50109 HIS_KIN

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.6 %Cys     (Translated Protein)
3.0 %Met     (Translated Protein)
3.6 %Cys+Met (Translated Protein)
0.6 %Cys     (Mature Protein)
2.8 %Met     (Mature Protein)
3.3 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MTTEEKKEEFLATVIDSVGDGVIVIDLDGRIALMNPAAEEISGISRRQAVGHRFALVFHR
CCCHHHHHHHHHHHHHHCCCCEEEEEECCCEEEECCCHHHHHHHHHHHHHHHHHHHHHHH
EAVLREMVGKTATSGMTISDHENIVIRKLKQLTPVSATTFPLMLPHGETTGTILVLRDIT
HHHHHHHHCCHHCCCCEECCCCHHHHHHHHHHCCCCCCCCEEEECCCCCCCEEEEEHHHH
SIRELEDAVRNADRLSTLGTLAAGLAHEIKNPLGGIKGAAQLLELELPTESELRDNVRIM
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHEECCCHHHHHHHHHHH
LKEVERVNRIVEELLALASPRGLQLSKVNLHKVIGDILTLQKRSTEGKNVAFQQQFDPSI
HHHHHHHHHHHHHHHHHCCCCCCEEHHHHHHHHHHHHHHHHHCCCCCCCEEEHHCCCCCC
PPILADEGLLTQLFLNLVKNAMEAVDDGGCIRVASRVISDYSMTQKGERRSRMVAIDVAD
CCCCCCCCHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHCCCCCCCEEEEEECC
DGPGIPPERLEQLFTPFFTTKTKGTGLGLAICQKIVTEHRGMIKVESYPGKGTTFTVMLP
CCCCCCHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHCCCEEEEECCCCCCCEEEEEEE
LIQ
CCC
>Mature Secondary Structure 
TTEEKKEEFLATVIDSVGDGVIVIDLDGRIALMNPAAEEISGISRRQAVGHRFALVFHR
CCHHHHHHHHHHHHHHCCCCEEEEEECCCEEEECCCHHHHHHHHHHHHHHHHHHHHHHH
EAVLREMVGKTATSGMTISDHENIVIRKLKQLTPVSATTFPLMLPHGETTGTILVLRDIT
HHHHHHHHCCHHCCCCEECCCCHHHHHHHHHHCCCCCCCCEEEECCCCCCCEEEEEHHHH
SIRELEDAVRNADRLSTLGTLAAGLAHEIKNPLGGIKGAAQLLELELPTESELRDNVRIM
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHEECCCHHHHHHHHHHH
LKEVERVNRIVEELLALASPRGLQLSKVNLHKVIGDILTLQKRSTEGKNVAFQQQFDPSI
HHHHHHHHHHHHHHHHHCCCCCCEEHHHHHHHHHHHHHHHHHCCCCCCCEEEHHCCCCCC
PPILADEGLLTQLFLNLVKNAMEAVDDGGCIRVASRVISDYSMTQKGERRSRMVAIDVAD
CCCCCCCCHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHCCCCCCCEEEEEECC
DGPGIPPERLEQLFTPFFTTKTKGTGLGLAICQKIVTEHRGMIKVESYPGKGTTFTVMLP
CCCCCCHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHCCCEEEEECCCCCCCEEEEEEE
LIQ
CCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 7.0

TargetDB status: NA

Availability: NA

References: 8346225; 9097040; 9278503 [H]