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The map label for this gene is bepC [H]

Identifier: 39996053

GI number: 39996053

Start: 1022466

End: 1023740

Strand: Reverse

Name: bepC [H]

Synonym: GSU0950

Alternate gene names: 39996053

Gene position: 1023740-1022466 (Counterclockwise)

Preceding gene: 39996054

Following gene: 39996052

Centisome position: 26.84

GC content: 71.14

Gene sequence:

>1275_bases
ATGCGAGTGATGATCGTGACTGCGGCGCTTCTCCTGCTCTCGGCCCAGAGACTCCCGGCAACGGAGCCCCTTACCCTCCG
GGAGGCATTGGTGACGGCCATGGAGAACCACCCGAGAACCATGGCGGCCCGGGAATCGCTACGCGGGGCCGATGCGCGCG
CGGGGCAGGCCCGCTCGGGCTACTATCCGCGGCTGGACCTGGTGGCGGATTGGAACCGGGGCCGCTCCTACCTGACCGCC
CTCGAAGGGTTCAAGGAGACGGAGACCTATACGGCCGGCCTTACGCTCCGCCAGACGCTCCACGACTTCGGCCGCACTTC
GGGAACCGTGGCAGCGGCAGAGGGAGAGCGGGGCGCGGCCCGGGAATCCCTGGCAGCGGTCCGGCAGGACGTGGCGCTCC
GGGTGCGAGAGGTCTACAACGTCCTCCTGACGGCGGAGCGCCGGGTCGAAGCGCTGAGGGAGACCGTCCGGGCGCGGGAG
GAGGTCCTGGGCCAGGCCCGGGCGTTCTACAGCGAAGGGGTCAGGCCACGGCTGGACGTGGTCCGGGCCGAGGCCGATCT
CTACGCGGCCCGAACGCTCCTCACGGCAGCCGAAAATGAACGGGACATGGCCCGGGTGGATCTGGCCGCCGCCATGGGGC
TCGACAGTCTCCCCGACCGGCCCCTGGCTGAACCGGACGGGGAGAGCCCTTCCCTGCCCGATCTGGCGGAGGCGAAACGC
CGCGCCACGGCAGGCAGGGTGGAACTGAAGCGGTACGATGCGCTCCACGCGGCGGCCCAAGGGGCAGCGACGGCCGCCCG
CGGCGGACATCTGCCGGTGATCGAGGCAACGGCCGGCGCCGGATACGCCGACCGGAGCTTCCCGCCGGAGGGGAACACCT
GGGGGGTCGGCGTGCGCCTTACCGTGCCGATCTTCGCGGGGTTCGCCACCAGGGAGAAGGAACGGGAAGTCGCGGCAGCG
CTGCGGGAAGTGGAGGCCCGGCGCCGGGACCAGCAGCTCCAGGTGGGGCGTGAAGTGGAAGGCGCCTGGCTGGGGATGCG
GGAGGCCCTGGCCCGGGTGGAGTCGACCGGCCGGGAGCTGGAAGCGGCCCGGGAGAGCCGGACCCTGGCCATCGAACGCT
ACCGGGAGGGGGTGGGCACGATCATCGAGGTGACCGATGCCCAGGCCCGGGAGCTGGAAGCGGAAACGGCCAACATCCGC
GCCAGGGGTGATACTCGCATAGCCTTGGCGCGTCTCGATCGGGCGGTTGGCGACGACGGAGGAACGGAACAATGA

Upstream 100 bases:

>100_bases
GCTCTGGGACAATTTCGCGGAACTGCTCCGCTAATTTTTTTACCCCAAAAGTGAGCAAATGCTCACTTAATATTCATTTT
ACTGAATAAGGAACCATGCC

Downstream 100 bases:

>100_bases
CGTTGATACACACACTGCGCAGACACAAGACCGCCCTGGTCCGGACCGCACTTCTCGCGGCGCTGGTCGTGCTCGTCAAG
GCCACCATCCTGGCCCCGCC

Product: outer membrane efflux protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 424; Mature: 424

Protein sequence:

>424_residues
MRVMIVTAALLLLSAQRLPATEPLTLREALVTAMENHPRTMAARESLRGADARAGQARSGYYPRLDLVADWNRGRSYLTA
LEGFKETETYTAGLTLRQTLHDFGRTSGTVAAAEGERGAARESLAAVRQDVALRVREVYNVLLTAERRVEALRETVRARE
EVLGQARAFYSEGVRPRLDVVRAEADLYAARTLLTAAENERDMARVDLAAAMGLDSLPDRPLAEPDGESPSLPDLAEAKR
RATAGRVELKRYDALHAAAQGAATAARGGHLPVIEATAGAGYADRSFPPEGNTWGVGVRLTVPIFAGFATREKEREVAAA
LREVEARRRDQQLQVGREVEGAWLGMREALARVESTGRELEAARESRTLAIERYREGVGTIIEVTDAQARELEAETANIR
ARGDTRIALARLDRAVGDDGGTEQ

Sequences:

>Translated_424_residues
MRVMIVTAALLLLSAQRLPATEPLTLREALVTAMENHPRTMAARESLRGADARAGQARSGYYPRLDLVADWNRGRSYLTA
LEGFKETETYTAGLTLRQTLHDFGRTSGTVAAAEGERGAARESLAAVRQDVALRVREVYNVLLTAERRVEALRETVRARE
EVLGQARAFYSEGVRPRLDVVRAEADLYAARTLLTAAENERDMARVDLAAAMGLDSLPDRPLAEPDGESPSLPDLAEAKR
RATAGRVELKRYDALHAAAQGAATAARGGHLPVIEATAGAGYADRSFPPEGNTWGVGVRLTVPIFAGFATREKEREVAAA
LREVEARRRDQQLQVGREVEGAWLGMREALARVESTGRELEAARESRTLAIERYREGVGTIIEVTDAQARELEAETANIR
ARGDTRIALARLDRAVGDDGGTEQ
>Mature_424_residues
MRVMIVTAALLLLSAQRLPATEPLTLREALVTAMENHPRTMAARESLRGADARAGQARSGYYPRLDLVADWNRGRSYLTA
LEGFKETETYTAGLTLRQTLHDFGRTSGTVAAAEGERGAARESLAAVRQDVALRVREVYNVLLTAERRVEALRETVRARE
EVLGQARAFYSEGVRPRLDVVRAEADLYAARTLLTAAENERDMARVDLAAAMGLDSLPDRPLAEPDGESPSLPDLAEAKR
RATAGRVELKRYDALHAAAQGAATAARGGHLPVIEATAGAGYADRSFPPEGNTWGVGVRLTVPIFAGFATREKEREVAAA
LREVEARRRDQQLQVGREVEGAWLGMREALARVESTGRELEAARESRTLAIERYREGVGTIIEVTDAQARELEAETANIR
ARGDTRIALARLDRAVGDDGGTEQ

Specific function: Involved in the efflux of toxic and relatively hydrophobic compounds. Influences survival inside the host [H]

COG id: COG1538

COG function: function code MU; Outer membrane protein

Gene ontology:

Cell location: Cell outer membrane (Probable) [H]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the outer membrane factor (OMF) (TC 1.B.17) family [H]

Homologues:

None

Paralogues:

None

Copy number: 120 Molecules/Cell In: Growth Phase, Minimal Media (Based on E. coli). 240 Molecules/Cell In: Stationary Phase, Rich Media (Based on E. coli). [C]

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR003423
- InterPro:   IPR010130 [H]

Pfam domain/function: PF02321 OEP [H]

EC number: NA

Molecular weight: Translated: 46219; Mature: 46219

Theoretical pI: Translated: 5.93; Mature: 5.93

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
1.7 %Met     (Translated Protein)
1.7 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
1.7 %Met     (Mature Protein)
1.7 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MRVMIVTAALLLLSAQRLPATEPLTLREALVTAMENHPRTMAARESLRGADARAGQARSG
CEEHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHCCCHHHHHHHHHCCCCCCCCCCCCC
YYPRLDLVADWNRGRSYLTALEGFKETETYTAGLTLRQTLHDFGRTSGTVAAAEGERGAA
CCCCEEEEECCCCCHHHHHHHHCCHHCCHHHHHHHHHHHHHHHCCCCCCEEECCCCCCHH
RESLAAVRQDVALRVREVYNVLLTAERRVEALRETVRAREEVLGQARAFYSEGVRPRLDV
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHH
VRAEADLYAARTLLTAAENERDMARVDLAAAMGLDSLPDRPLAEPDGESPSLPDLAEAKR
HHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCHHHHHHH
RATAGRVELKRYDALHAAAQGAATAARGGHLPVIEATAGAGYADRSFPPEGNTWGVGVRL
HHHCCHHHHHHHHHHHHHHHCCHHHCCCCCCEEEEECCCCCCCCCCCCCCCCEEEEEEEE
TVPIFAGFATREKEREVAAALREVEARRRDQQLQVGREVEGAWLGMREALARVESTGREL
EHHHHHCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHH
EAARESRTLAIERYREGVGTIIEVTDAQARELEAETANIRARGDTRIALARLDRAVGDDG
HHHHHHHHHHHHHHHCCCCCEEEECCCHHHHHHHHHCCEEECCCCHHHHHHHHHHHCCCC
GTEQ
CCCC
>Mature Secondary Structure
MRVMIVTAALLLLSAQRLPATEPLTLREALVTAMENHPRTMAARESLRGADARAGQARSG
CEEHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHCCCHHHHHHHHHCCCCCCCCCCCCC
YYPRLDLVADWNRGRSYLTALEGFKETETYTAGLTLRQTLHDFGRTSGTVAAAEGERGAA
CCCCEEEEECCCCCHHHHHHHHCCHHCCHHHHHHHHHHHHHHHCCCCCCEEECCCCCCHH
RESLAAVRQDVALRVREVYNVLLTAERRVEALRETVRAREEVLGQARAFYSEGVRPRLDV
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHH
VRAEADLYAARTLLTAAENERDMARVDLAAAMGLDSLPDRPLAEPDGESPSLPDLAEAKR
HHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCHHHHHHH
RATAGRVELKRYDALHAAAQGAATAARGGHLPVIEATAGAGYADRSFPPEGNTWGVGVRL
HHHCCHHHHHHHHHHHHHHHCCHHHCCCCCCEEEEECCCCCCCCCCCCCCCCEEEEEEEE
TVPIFAGFATREKEREVAAALREVEARRRDQQLQVGREVEGAWLGMREALARVESTGREL
EHHHHHCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHH
EAARESRTLAIERYREGVGTIIEVTDAQARELEAETANIRARGDTRIALARLDRAVGDDG
HHHHHHHHHHHHHHHCCCCCEEEECCCHHHHHHHHHCCEEECCCCHHHHHHHHHHHCCCC
GTEQ
CCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 6.0

TargetDB status: NA

Availability: NA

References: 12271122 [H]